LOCUS       NM_001109466            3003 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus flavin containing monooxygenase 9 (Fmo9), mRNA.
ACCESSION   NM_001109466 XM_001063500
VERSION     NM_001109466.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473958.2.
            
            On Oct 4, 2007 this sequence version replaced XM_001063500.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q23"
     gene            1..3003
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /note="flavin containing monooxygenase 9"
                     /db_xref="GeneID:685365"
                     /db_xref="RGD:1595083"
     exon            1..87
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            88..189
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            190..334
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..1831
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /note="flavin containing monooxygenase 9 pseudogene"
                     /codon_start=1
                     /product="flavin containing monooxygenase 9"
                     /protein_id="NP_001102936.1"
                     /db_xref="GeneID:685365"
                     /db_xref="RGD:1595083"
                     /translation="MAKKRIAVIGAGISGLGAIKCCLDEDLEPTCFERSDDIGGLWKF
                     QKNPSEKMPSIYKSVTINTSKEMMCFSDFPIPDHFPNYMHNCKLMDYFRMYAEHFGLL
                     DHIRFKTTVRSVRKRPDFSVQGQWDVIVEADGKQESLVFDGILVCSGHHTDPHLPLKS
                     FPGIEKFEGCYFHSREYKSPEDYVGKRIIVVGIGNSGVDIAVELGRVAKQVFLSTRRG
                     SWILHRVWNNGYPMDSSFFTRFNSFLQKLLSTEAVNKYLEKMMNSRFNHAHYGLQPQH
                     RPLSQHPTVSDDLPNHIISGKVQVKPNVKEFRGTDVVFDDGTVEEKIDVVIFATGYSF
                     SFPFLEDLIAVTDNEVSLYKLMFPPDLEKPTLAVIGLIQPLGIVLPISELQSRWAVRV
                     FKGLSKLPSVKIMNADMAQRKKAMAKRYVKTVRHTIQVDHIEYMDEIAALAGVKPNLL
                     LLFLSDPLLAMEVFFGPCTPYQYRLQGPGKWDGARRAILTQRERIIKPLKTRITSEKS
                     HSAPGLFWIKMTLFGLAFLVISLIYFSYICYEKRK"
     exon            335..523
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            524..686
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            687..829
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            830..1029
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            1030..1382
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            1383..1455
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..3003
                     /gene="Fmo9"
                     /gene_synonym="Fmo9p"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacttcatct tcaagagcac gggaggaagg acatctttac cttcattaag aagcccaaac
       61 taaacttcaa tttcctcctt cccaagggct ggatcctctg aattcaaaga ccgtgtgata
      121 gcttcttttg tggcctcttc agcaatcaca gttggggtca acccacagtt tgaataattt
      181 ataaaaaggt ggtaacgcca tggccaagaa gcggatagct gtcattggag ctgggatcag
      241 tggcctggga gccatcaagt gttgcttgga tgaagacctg gagcccacct gctttgaaag
      301 aagtgatgac atcggaggcc tgtggaaatt tcaaaaaaac ccttcagaga aaatgcccag
      361 tatctataaa tctgtgacca tcaacacttc aaaggagatg atgtgcttca gtgattttcc
      421 catccctgac cacttcccca actacatgca caactgcaag ctcatggact acttcaggat
      481 gtacgcagag cactttggcc ttctggatca cattcgattt aagaccacag tgaggagtgt
      541 gagaaagcgt ccagacttca gtgtccaagg acaatgggat gtcatcgtgg aggcagatgg
      601 gaaacaggag agcctagtct ttgatgggat tctggtctgc agtggccatc acacagaccc
      661 ccacctgcca ctcaagtcct tcccaggtat tgagaagttc gaaggctgtt atttccacag
      721 ccgggaatac aaaagtcctg aggattatgt gggaaagaga atcatagtgg ttggcattgg
      781 gaactccggt gtggatatcg ctgtggaact cggtcgtgta gcaaaacagg tatttctcag
      841 caccaggcga ggatcatgga ttttgcaccg tgtttggaac aatggctatc ccatggatag
      901 ttcatttttc actcggttca atagctttct ccagaagcta ctaagcacag aagcagtaaa
      961 taagtaccta gagaagatga tgaactcgag attcaaccat gcccattatg gtctgcagcc
     1021 acagcacagg ccgctgagtc agcaccccac cgtcagtgat gaccttccga accacatcat
     1081 ttccgggaaa gtccaagtga aacctaatgt gaaggagttc aggggaacag acgttgtttt
     1141 tgatgatggc acagtggagg agaagattga cgttgtcatc tttgccacag gatacagctt
     1201 ttctttccca ttccttgagg atctgattgc agttactgac aatgaggtgt ccctgtataa
     1261 gctgatgttc cctccagacc tggagaagcc aacactggct gtcattggac tcatccagcc
     1321 cttgggtatc gtcctaccta tctcagaact tcagtctcgc tgggctgtgc gggtgttcaa
     1381 agggctgagc aaattgccct cagtgaagat catgaatgca gacatggccc aaaggaaaaa
     1441 ggccatggcg aaacggtatg tgaagacagt caggcacaca atccaagtgg accacattga
     1501 gtacatggat gagattgccg ctctggctgg ggtgaagccc aacctcttgc tcttatttct
     1561 gtcggatcca ttgctggcca tggaagtctt ctttgggccc tgtaccccat accaataccg
     1621 tttgcaaggt ccagggaaat gggatggggc caggagggcc atcctaactc agagagagcg
     1681 gatcatcaag cccttgaaga ctcgaattac tagtgagaag agtcactctg ccccaggtct
     1741 cttttggata aagatgacac tatttggcct ggcatttctg gttataagct taatatactt
     1801 tagttatatt tgttatgaga aacgtaaatg aatgagtgaa ttgtttagca gggaaaacat
     1861 gtacttctac taattgtaga ctatggcaaa gcctttagtc agtagcatac agaaatctca
     1921 tttaaccctg ctatagctac agaaatgttt agatatactt tataagtagt atagtccttt
     1981 aagatgggtg tgcattaaca tttataaaac attttgaatg cataagaaga gtttatgttt
     2041 aaaacagtct tgagacctta tttaaagctg gagagacttt tgcccccaag tggaacataa
     2101 ctggttccac caaggttggt tatatttgtg ggaatttata aatattaact ccgcactgat
     2161 tttattttcc acttagtttt tttttccatc caactcattc tgttaacttg tgtcaagaca
     2221 tgaaagctta agtttaaaac atggaagctt aaaaatatgt cagaatgttt tgtgtttcaa
     2281 ctgattagca ccaataaaat tacttttcgt ttaaattatg gtgtttaaag agttaaagaa
     2341 taaaacagag tatgtgtcag agctgtcaat aacctacttt gactctcaat acttagaaat
     2401 aggtcattgc tgtgctgtgt taaggcggaa tggagattta acgagcaacc aggagtctcc
     2461 ggctgctctg ttagttcacc tggctttctg accgctctct ccctgtgtgg gatacatggc
     2521 ttctcattcc accaactacc agaaagtgtc tcctaagact ccacctctgc cattttgttc
     2581 tcctgattat aaaatgccaa acaaccatgg gacaaaactg tgaagaccaa gtggggagag
     2641 gaaggagcac gagaacttgc atcccagaag aagcctcact cagctgaagc atcccgagga
     2701 aagtttgctc actgagaaac agcttagttg ctcagcagag taactcaatt gaaagcccac
     2761 ttgtttttct gagatgggaa aaaaatgccc acatgcattc caggaatgga aaggggtgaa
     2821 gagaattctg tgtctcggga cttccactgc tacccaagat gataacgtag tcatctgacg
     2881 cagttgcact tgaccacagg aaccattgac aactgctgga aactaattct cagaagctaa
     2941 aaatataaga cagggaacgt tgcagatgtg attgagataa attttaaaaa atattcatgt
     3001 agg
//
