LOCUS       NM_001399766            4184 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus formin-like 3 (Fmnl3), mRNA.
ACCESSION   NM_001399766 XM_017595325
VERSION     NM_001399766.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Bai,S.W., Herrera-Abreu,M.T., Rohn,J.L., Racine,V., Tajadura,V.,
            Suryavanshi,N., Bechtel,S., Wiemann,S., Baum,B. and Ridley,A.J.
  TITLE     Identification and characterization of a set of conserved and new
            regulators of cytoskeletal organization, cell morphology and
            migration
  JOURNAL   BMC Biol 9, 54 (2011)
   PUBMED   21834987
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Mason,F.M., Heimsath,E.G., Higgs,H.N. and Soderling,S.H.
  TITLE     Bi-modal regulation of a formin by srGAP2
  JOURNAL   J Biol Chem 286 (8), 6577-6586 (2011)
   PUBMED   21148482
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jan 14, 2022 this sequence version replaced XM_017595325.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.42229.1,
                                           SRR26643292.31826.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-321               JAXUCZ010000007.1  132384163-132384483 c
            322-405             JAXUCZ010000007.1  132353241-132353324 c
            406-486             JAXUCZ010000007.1  132351317-132351397 c
            487-563             JAXUCZ010000007.1  132350446-132350522 c
            564-647             JAXUCZ010000007.1  132347619-132347702 c
            648-800             JAXUCZ010000007.1  132345045-132345197 c
            801-909             JAXUCZ010000007.1  132343825-132343933 c
            910-986             JAXUCZ010000007.1  132343589-132343665 c
            987-1080            JAXUCZ010000007.1  132343300-132343393 c
            1081-1155           JAXUCZ010000007.1  132341798-132341872 c
            1156-1266           JAXUCZ010000007.1  132341576-132341686 c
            1267-1416           JAXUCZ010000007.1  132341120-132341269 c
            1417-1518           JAXUCZ010000007.1  132340639-132340740 c
            1519-1801           JAXUCZ010000007.1  132339195-132339477 c
            1802-1870           JAXUCZ010000007.1  132338602-132338670 c
            1871-1995           JAXUCZ010000007.1  132338390-132338514 c
            1996-2198           JAXUCZ010000007.1  132337972-132338174 c
            2199-2433           JAXUCZ010000007.1  132337366-132337600 c
            2434-2502           JAXUCZ010000007.1  132337184-132337252 c
            2503-2583           JAXUCZ010000007.1  132337008-132337088 c
            2584-2713           JAXUCZ010000007.1  132336789-132336918 c
            2714-2874           JAXUCZ010000007.1  132336126-132336286 c
            2875-2976           JAXUCZ010000007.1  132335743-132335844 c
            2977-3069           JAXUCZ010000007.1  132335328-132335420 c
            3070-3193           JAXUCZ010000007.1  132334896-132335019 c
            3194-4184           JAXUCZ010000007.1  132333130-132334120 c
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..4184
                     /gene="Fmnl3"
                     /note="formin-like 3"
                     /db_xref="GeneID:300225"
                     /db_xref="RGD:1583854"
     exon            1..321
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     CDS             196..3459
                     /gene="Fmnl3"
                     /codon_start=1
                     /product="formin-like protein 3"
                     /protein_id="NP_001386695.1"
                     /db_xref="GeneID:300225"
                     /db_xref="RGD:1583854"
                     /translation="MGNLESTDGGPGEPPSVPLLLPPGKTPMPEPCELEERFALVLSS
                     MNLPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLQSFLDPNVTRKKFRRR
                     VQESTKVLRELEISLRTNHIGWVREFLNDENKGLDVLVDYLSFAQCSVMFDFEGLESG
                     DDGAFDKLRSWSRSIEDLQPPNALSAPFTNSLARSARQSVLRYSTLPGRRALKNSRLV
                     SQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAV
                     CLVRGGHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDSNIDFLVACMQFINIVVHSV
                     EDMNFRVHLQYEFTKLGLEEFLQKSRHTESEKLQVQIQAYLDNVFDVGGLLEDAETKN
                     VALEKVEELEEHVSHLTEKLLDLENENMMRVAELEKQLLQREKELESIKETYENTSNQ
                     VHTLRRLIKEKEEAFQRRCHLEPSARSLESMGGSEALARVGPTELTEGSTPSDLDLLA
                     PAPPAEETLPLPPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVLTVGLSAIRIKKPI
                     KTKFRLPVFNWTALKPNQINGTVFSELDDEKILEDLDLDKFEELFKTKAQGPALDLIC
                     SKNKTAQKAASKVTLLEANRAKNLAITLRKAGRTAEEICRAIHTFDLQTLPVDFVECL
                     MRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDN
                     LQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLL
                     DTKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSLENVLLDVKELGRGM
                     ELIRRECSIHDNSVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSV
                     FFPVFVRFIRSYKEAEQENEARKKQEEVMREKQLAQEAKKLDAKTPSQRNKWQQQELI
                     AELRRRQAKEHRPVYEGKDGAIEDIITGFNHHQPMVTHSQARSECCTTQWPSSGSRSP
                     LRSSWRQEYYNSQSPADVDSEPKAQGPAEGYVVPAAAAPALRLTRPCATVGTRSVGA"
     exon            322..405
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            406..486
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            487..563
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            564..647
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            648..800
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            801..909
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            910..986
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            987..1080
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1081..1155
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1266
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1416
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1518
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1801
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1802..1870
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1871..1995
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            1996..2198
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2199..2433
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2434..2502
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2503..2583
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2584..2713
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2714..2874
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2875..2976
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            2977..3069
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            3070..3193
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
     exon            3194..4184
                     /gene="Fmnl3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgtggcc tgcatgaata aggcgcgctt cagcgcgtcg agcgcttcgc caccgcccgc
       61 cggactacga ggcgccccct gaggggcgga ggaatcgggc ctggggagcg ggcgctgagg
      121 gaggagccag gtcggagctg ctgagggccc tggcgaggag gtggagggct gaggcccgga
      181 ggaggccccg ccgcgatggg caacctggag agcaccgacg gcggcccggg cgagccgccc
      241 tcagtcccgc tgctgctgcc gcccggcaag acgccgatgc ccgagccgtg cgagctggaa
      301 gagagattcg ccctagtgct gagctctatg aacctgcctc ctgacaaggc ccggctgctg
      361 cgacagtatg acaacgagaa gaagtgggat ctgatctgtg accaggaaag atttcaagtg
      421 aagaatcctc cccacaccta tatccagaaa ctccagagct tcttggaccc caatgtgacg
      481 cggaagaagt tcaggaggag agtccaggag tcaaccaaag tcctcaggga gctggagatc
      541 tcacttcgca ccaatcacat tgggtgggta agggagtttc tcaatgatga gaacaaaggc
      601 ctggatgtgc tggtggatta cctgtcgttt gcccagtgtt ctgtcatgtt tgactttgag
      661 ggtctggaga gtggtgatga tggtgcattt gacaagctcc ggtcctggag caggtcaatc
      721 gaggacctgc aaccgcccaa cgccctgtcg gcccccttca ccaacagcct cgctcgctct
      781 gcgcgccagt ccgtgctccg gtacagtact ctccctggcc gccgggccct gaagaactcc
      841 cggctggtga gccagaagga tgatgtgcat gtctgcatcc tttgtctcag agccatcatg
      901 aactatcagt atggcttcaa cttggtcatg tcccaccccc acgctgtcaa tgagattgca
      961 cttagcctca acaacaagaa tccaaggacc aaagccctgg tcttggagct gctggcagct
     1021 gtgtgtttgg tgcggggagg tcatgaaatc atccttgctg cctttgacaa tttcaaagag
     1081 gtgtgcaaag aactgcatcg ctttgagaag ctaatggagt atttccggaa tgaagacagc
     1141 aacattgact tcttggtggc ctgcatgcag ttcatcaaca ttgtggtaca ctcggtagag
     1201 gacatgaact tccgggtcca cctgcaatat gagtttacca agttggggct ggaggaattc
     1261 ctacagaagt caaggcacac ggagagcgag aaattacagg tgcagattca ggcatacctg
     1321 gacaatgtgt ttgacgtggg gggcttattg gaggatgcgg aaaccaagaa tgtagccctg
     1381 gaaaaggtgg aagaactgga ggagcatgtg tctcatctca cagagaagct tctggacctg
     1441 gagaatgaga atatgatgcg ggtggcagaa ctggagaagc agctgctaca gcgggaaaag
     1501 gagctggaga gcatcaagga gacatacgag aacacaagca accaggtgca cacccttcgg
     1561 aggctcatta aggagaagga ggaggccttc cagcgccgat gccacctgga gccaagtgcc
     1621 cggagcctgg aatccatggg tgggagcgag gccctagcca gggtaggccc tacagagctg
     1681 actgaaggct cgacaccctc cgacctggac ctgctggctc cagccccacc tgctgaggag
     1741 actcttcctc tgcctcctcc accagccccg cctttgcccc caccccctcc tccactacca
     1801 gacaaatgtc cccctgcccc acctcttcct ggtgctgctc cttctgtggt gttgacagtg
     1861 ggcctgtctg ccattcgcat caagaaacct atcaagacca agttccggct gccagtcttc
     1921 aactggacag cactgaaacc caatcagatc aatggcactg tcttcagtga acttgatgat
     1981 gagaagatct tggaggactt agacctggac aagtttgaag aattatttaa gacaaaagcc
     2041 cagggtcctg cccttgacct catctgctcc aagaataaga cagcacaaaa ggctgccagc
     2101 aaggtgaccc ttttggaagc caatcgtgcc aagaacctgg ctatcaccct tcgcaaggct
     2161 gggcgcacag ctgaggagat ctgcagggcc atccacacgt ttgacttaca gacactacct
     2221 gtagacttcg tggaatgcct gatgcgcttc ctgcctacag aggctgaggt gaaactgttg
     2281 cggcagtatg agcgagaacg acagccccta gaggagctgg cagctgagga ccgcttcatg
     2341 ttgctcttca gcaaggtgga acggttgacc cagcgaatgg ctggcatggc ctttctgggc
     2401 aacttccagg acaatctgca gatgctcaca ccgcaactga atgccatcat tgcagcctct
     2461 gcctccgtca agtcctcaca gaaactgaag cagatgctgg agatcattct tgcattgggg
     2521 aactacatga acagcagcaa gcgaggtgct gtatatggct tcaagctcca gagcctggac
     2581 ctgctgttag acaccaagtc cactgaccgg aaaatgacac tgctgcactt catcgccttg
     2641 acggtgaagg agaaataccc agagttggct aacttctggc aggagctgca ctttgtggag
     2701 aaggctgcag cagtgtccct ggagaacgtg ctgctagacg tcaaagagct gggccgggga
     2761 atggagctga ttcggcggga atgcagcatt catgacaaca gcgttctgcg aaacttcctt
     2821 agtaccaatg aaggcaaact ggacaagctc cagcgtgatg ccaaaactgc tgaggaggcc
     2881 tacaatgcag ttgtgcgcta ctttggcgag agtcccaaga ccacacctcc ctctgtattt
     2941 ttcccagtat ttgtccgatt cattcgttct tacaaggaag cagaacaaga gaatgaagcc
     3001 cgtaagaaac aagaggaggt aatgcgggag aagcagctgg ctcaggaagc caagaagctg
     3061 gatgccaaga ctccatccca gcggaacaaa tggcagcagc aggagctgat tgcagagctg
     3121 aggcggcgcc aagctaagga acaccggcct gtttacgagg ggaaggatgg tgccattgag
     3181 gacatcatta caggcttcaa ccatcatcaa cccatggtca ctcacagcca agccaggagt
     3241 gagtgctgta ccacccagtg gccctcctcg ggctccaggt ccccattgag atcctcttgg
     3301 aggcaggagt actataattc tcagagtcct gcagacgtgg acagtgaacc caaagcccag
     3361 ggcccggcag aaggctatgt tgtcccagct gcagctgctc cagctctaag gctgactcgt
     3421 ccctgtgcca ctgtgggcac taggtctgta ggggcctagc attctcctag tgccccaccc
     3481 gcaaagtgca ctttgccccc agtcttcaac ttcagttcct gaaggggtca gttcagggct
     3541 gggaaaaacc acttccaact tcagctcatt gagggtacac agtctctccc ctagagtctc
     3601 atgggataag aggaggagga tgtacatccc atgagaaata ctgatcgccc cgcccccagc
     3661 acacacacac agcactagtc tagagagtgt tcagattgat ggacccttgg actctgccaa
     3721 tattgtactg caggagcttc ttgctccact tccttaaaac caaagtgttg tgggagaaga
     3781 tttgaggctt tcaaaagtgg aaagggaagg gctaacgttt aacatggaga gtgggtggca
     3841 gtgggaccag ctgacccctg gtggccaccc tctggatggg cacttcctgc tccaaacaat
     3901 gacaggaagg gcctggaccc caccctgccc actgtcttcc cactgactga agagcagaag
     3961 cactgtctgt accagctcca agattgctag aggaaggatg tgccagcagg ctcaccttcc
     4021 tcagcctgtg gattctggcc caggaacggg caacagagga gcctcacaga ctgactgctc
     4081 aattccctgc tgggcttcct gaccctggaa gggaatgcag ggcactttgt cttgtacatg
     4141 taccatttcc ttccttgtac ataaacccca gacctctcaa caaa
//
