LOCUS       XM_039106784            5510 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus formin-like 2 (Fmnl2), transcript
            variant X1, mRNA.
ACCESSION   XM_039106784
VERSION     XM_039106784.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106784.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5510
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5510
                     /gene="Fmnl2"
                     /note="formin-like 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 29 ESTs, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 39 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:499797"
                     /db_xref="RGD:1560248"
     CDS             366..3662
                     /gene="Fmnl2"
                     /codon_start=1
                     /product="formin-like protein 2 isoform X1"
                     /protein_id="XP_038962712.1"
                     /db_xref="GeneID:499797"
                     /db_xref="RGD:1560248"
                     /translation="MGNAGSMDSQQTDFRAHNVPLKLPMPEPGELEERFAIVLNAMNL
                     PPDKARLLRQYDNEKKWELICDQERFQVKNPPHTYIQKLKGYLDPAVTRKKFRRRVQE
                     STQVLRELEISLRTNHIGWVREFLNEENKGLDVLVEYLSFAQYAVTFDFESVESTVES
                     TVDKSKPWSRSIEDLHRGNNLPSPVGNSVSRSGRHSALRYNTLPSRRTLKNSRLVSKK
                     DDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLV
                     RGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDM
                     NFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLEDAETKNAAL
                     ERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQVHT
                     LRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLPMGSDL
                     AGGNYVGPVPGAASSGPSVPPPPPLPPSSDTPEAAQNGPASPPMSPPPPPPPPPPPPP
                     PPPPPLPGPAAETVPAPPLPPPPPPSAPPLPGTSSPTVVFNSGLADGPIKLFSVKIKK
                     PIKTKFRMPVFNWVALKPNQINGTVFNEIDDERILEDLNVDEFEEIFKTKAQGPAIDL
                     SSSKQKITQKGSSKVTLLEANRAKNLAITLRKAGKSADEICKAIHVFDLKTLPVDFVE
                     CLMRFLPTENEVKVLRLYERERKPLENLSDEDRFMMQFSKIERLMQKMTIMAFIGNFT
                     ESIQMLTPQLHAIIAASVSIKSSQKLKKILEIILALGNYMNSSKRGAVYGFKLQSLDL
                     LLDTKSTDRKQTLLHYISNVVKEKYQQVTLFYNELHYVEKAAAVSLENVLLDVKELQR
                     GMDLTKREYTMHDHNTLLKEFILHNEGKLKKLQDDAKIAQDAFDDVVKYFGENPKTTP
                     PSVFFPVFVRFVKAYKQAEEENELRKKQEQALMEKLLEQEALMEQQDPKSPSHKSKRQ
                     QQELIAELRRRQVKDNRHVYEGKDGAIEDIITDLRNQPYRRADAVRRSVRRRFDDQNL
                     RSVNGGEITM"
ORIGIN      
        1 tcgtccgctc gcggtggggc ccgggctgag gtgtcagcgc cactgcggcc ggggcgagag
       61 gcggccccgc aggagcgcgc aagcggccgg gggcgccggc gggggcggcg ggagcaccat
      121 gtggatcggc gcccagcgcc ctgcagaccc ctcgcgaggc agagaggccg gggcggcgcc
      181 ggggcggcgg ggagcatgag ggcagccggg gaccggctgg gttcggagct ctgctagtga
      241 gcggcgtgag ctgagcacta gccgggacgc ggcggagggc gggagccgag cgcccggggc
      301 tgtgggcatt ttggacgcgg acgcgagggg ccgggagcca gccggggctc cggcacgcaa
      361 ccgacatggg caacgcgggg agcatggact cgcagcagac cgatttcagg gcgcacaacg
      421 tgccattgaa gctgccgatg cccgagccag gtgaactgga ggagcgcttt gccatcgtgc
      481 tgaatgctat gaacctacct cctgacaaag ccaggctact gcggcagtat gacaatgaga
      541 aaaaatggga gctgatctgt gaccaggaac gattccaggt gaagaaccct ccccatacat
      601 acatacagaa gctcaaaggc tacctggatc cagccgtaac caggaagaaa ttcagaaggc
      661 gtgttcaaga atctacgcaa gtgctaagag aactggaaat ttcattaaga accaaccaca
      721 ttgggtgggt cagagagttt ttgaatgagg aaaacaaagg ccttgatgtt cttgtggagt
      781 atctgtcctt cgcacagtat gcagtcactt ttgactttga aagtgtggaa agtaccgtgg
      841 agagtacggt ggacaaatca aagccctgga gcaggtccat cgaggacctg cacagaggga
      901 acaacctgcc ctcccctgtg ggcaacagtg tgtcccgctc tggaagacat tctgcacttc
      961 gatataatac cttgccaagc agaagaacct tgaaaaattc aagattagtg agtaagaaag
     1021 atgatgttca tgtttgtatc atgtgtttac gggccatcat gaattaccag tatggtttca
     1081 acatggtcat gtctcatcca cacgccgtca atgagattgc actaagtctg aacaacaaga
     1141 atcccagaac aaaagctctt gtcttggagc tgttggcagc tgtttgtctt gtcagaggcg
     1201 ggcatgaaat aattttatca gcttttgata acttcaagga ggtctgcgga gaaaagcagc
     1261 gttttgagaa gctgatggaa catttcagga atgaagataa taacatagat tttatggtgg
     1321 cctctatgca gtttattaat attgtagtcc attcggtaga agacatgaac ttcagagttc
     1381 atctccaata tgaatttacc aaattaggcc tggatgaata cttggataag ctgaaacaca
     1441 cagaaagtga caagctgcaa gtacagatcc aggcttacct ggacaacgtg ttcgacgtgg
     1501 gagctctgtt ggaagatgct gaaaccaaga atgctgcctt ggagcgggtg gaggaactgg
     1561 aagaaaacat ctctcatttg tctgaaaagc tgcaggacac ggagaatgaa gccatgtcca
     1621 agattgtgga actggaaaag caactcatgc agaggaataa ggaactggat gtcgtccggg
     1681 aaatctacaa agacgcaaac acccaagttc acacattaag aaaaatggtc aaagaaaagg
     1741 aagaagccat tcaaagacag tctaccctgg aaaaaaagat tcacgaactg gagaaacaag
     1801 ggaccatcaa aattcagaag aaaggggacg gggacattgc catactgccg gttgtggcct
     1861 ctggcacgtt acccatgggg tcagacctag cagggggtaa ctatgtggga ccagttccag
     1921 gggccgcctc ctcaggaccc tcagtccctc ctcccccacc actacctccg tcatcagaca
     1981 cacctgaagc agctcaaaat ggaccagcat caccacctat gtccccacct cctcccccac
     2041 cccctccacc ccctccccca ccccctccgc cccctccact cccaggtcct gcagctgaga
     2101 ctgtgccagc tcctcctctg ccaccacccc cacctccctc tgcacccccg ttgcctggga
     2161 cttcttcacc tacagtagtt ttcaactcag gattagcaga tgggccaatc aagcttttct
     2221 ctgtgaaaat taagaagcca atcaagacga agttccgaat gccagtgttc aactgggttg
     2281 ccctgaagcc caatcagatc aacggcactg tcttcaatga gatcgatgat gagcggatcc
     2341 tggaggattt aaatgtggac gaattcgagg aaatattcaa aacaaaagca caaggtcctg
     2401 ccattgatct ttcttcaagc aagcagaaaa taacacagaa gggatcaagt aaagtgacat
     2461 tattagaagc aaatcgagcc aaaaaccttg ccataacctt acggaaagcg ggaaagtccg
     2521 ctgatgagat atgtaaagct attcatgtgt ttgatttgaa gacactgcca gttgactttg
     2581 ttgaatgttt gatgaggttc ttgccaactg agaatgaggt caaagtgctt cgactctacg
     2641 agcgagagag gaagcccttg gagaacttgt cagatgagga ccgcttcatg atgcagttca
     2701 gtaagattga gcggctcatg cagaagatga ccatcatggc cttcattggg aacttcacag
     2761 agagcattca gatgctgact cctcaactgc acgcaatcat agcagcatct gtctctatca
     2821 agtcatctca aaagctcaag aaaattctgg agatcatctt ggcccttgga aactatatga
     2881 atagcagcaa acgaggagca gtctatggat tcaaacttca gagtttagat ctgctcttag
     2941 atacgaagtc gacagaccga aagcaaacgc tgctgcacta tatatcaaat gtggtgaagg
     3001 agaaatatca acaagttacc ctgttttaca acgagcttca ttatgtggaa aaagctgcag
     3061 cagtctccct tgaaaatgtt ctgctggatg tcaaggagct gcagagggga atggatttaa
     3121 ccaagaggga gtataccatg cacgaccaca acacactgct gaaagagttc atccttcaca
     3181 acgagggcaa gctgaagaag ctgcaggacg atgctaagat tgctcaggat gcctttgatg
     3241 atgtggtgaa gtattttggt gaaaatccca agacaactcc accctcagtg ttcttccctg
     3301 tctttgttcg atttgtgaaa gcctacaagc aagcagaaga ggaaaatgag ctgaggaaaa
     3361 agcaggaaca agctcttatg gaaaaactgt tagagcaaga agccctgatg gagcagcagg
     3421 atccaaagtc tccttcccat aaatcaaaga ggcagcagca agagttaatt gcagaattaa
     3481 gaaggcgaca agttaaagat aaccgtcatg tgtacgaggg aaaagacggc gccattgaag
     3541 acattatcac agatcttaga aaccaaccct acagaagagc cgatgcggtg agacgaagtg
     3601 tgaggcgacg ctttgatgat cagaatttgc gttctgttaa tggtggggaa ataacaatgt
     3661 gacctgagac cgccttcacg agaagggtgt acatgaaact gccattccag ccttcaatac
     3721 agatgaaata ctctcaaggg ctcagattta gtaaacatat aggaatttaa aaaataatgg
     3781 gttctccttt taacccctgt taacaagtgc ctaaaattgg aagtaacttg ctcagattaa
     3841 tcaaagcaat aggatttgac ttaaatcttt ttacatcagt atgttactca gttttttaac
     3901 caaaatgtaa atttcatatt aaattcatta tttgccattg tgattgtcct ttatggccca
     3961 ccctggtttc ctggtaatct gtaaataaca gggatgtgaa tgctatgggc ttcctttgct
     4021 gagaggtctt ctaagaaatt gttttcgagc catattcacc aacttgtaac aagggacttg
     4081 aaacaagaga gagggaagct ggtacacaat aacatctttc taccattaag tcccagcaac
     4141 gtacaaacag gatgaattgc agtgccactc caagtcattt aattctctta tttcacgctg
     4201 tttccgtgca agggtaatgc ataaaagcat tcacttgtat gactgcaaga tggcataaga
     4261 cactgagtga gacttatttg cagaactgtg ttacttgagc tagaggcagc ttttaataac
     4321 accaagtatg tttattaagt accactaaaa ttgtctcagt attctgattt ttgaggacca
     4381 ttatgggtga atccttaaaa tagaaattgg tgccttgtta gtcagggaga ttttaccaca
     4441 agctctatca gtaagcattc aaaattacat gtgttctgtt agtgtcatgt tgggaacctg
     4501 gccttattct cttctgacaa tcgaagggtc cttttctgtt ttctttgtaa attatactga
     4561 tacaattgac attaagttat tagggctgaa ttgctttgtg tacttctcac ttatgggaaa
     4621 ttccaattaa attaacatta agtttaaatt gtatgtgata gggttaaatg gttcactaag
     4681 tcacttactt cctcactggc aaggcatttc gatccattcc aaagtcaaag actggactga
     4741 agctaaattt gtacttttca caatacatat tctgcttctg gcttaccttg ttgatacatc
     4801 agtatattaa ttgtaaaaat tattgtatag tatttaacca ccaaatttgt gttcatgtga
     4861 accccttggt gaaggtcccc tttttcatgg atgtgtagtt atatgatctt taaaatgtac
     4921 agatattttg ctataagatt ggtgcagttt tttatggttt ttacacttct ctttaatccc
     4981 tacctaagcc tctaggtaat actgtaaata ttgttttaaa atgcatcagc ctatgctaca
     5041 caatctgaat gttactttaa cttatagttt gttttttaaa tatatatatt taactccaag
     5101 gacagtttaa aagtcagtta ccacatttca cagtagtctg cctatttaca gatctctttt
     5161 aaactgccac ttgctgtcac attcataaat gtgtagttta aaaagaacat gccaagattg
     5221 ttgtcttgtt gagtcaatat tcatcttggt gagtacatta atttgatcat gatgtcagat
     5281 aaatatttgg acctttttca caaaaatgag ctgttttcca aaggtgtgca tttgcgtaaa
     5341 gcaaactgcc tatttcccag tgtacaaatg gacaataatg ttggcatatt cttgtttgtc
     5401 tattaatggc cctgcttctt agcaatatta gaaatgtttt ataaaagcaa ttcatgttac
     5461 ttttctggtc ttttcatgcc atttgagcaa ataaactatt tacactacta
//
