LOCUS       NM_001399599             674 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus FLYWCH family member 2 (Flywch2), mRNA.
ACCESSION   NM_001399599 XM_017597590
VERSION     NM_001399599.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 12, 2022 this sequence version replaced XM_017597590.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU758876.1, BP501024.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMN12840110 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                JAXUCZ010000010.1  13310848-13310905   c
            59-487              JAXUCZ010000010.1  13305999-13306427   c
            488-674             JAXUCZ010000010.1  13303346-13303532   c
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..674
                     /gene="Flywch2"
                     /note="FLYWCH family member 2"
                     /db_xref="GeneID:108352059"
                     /db_xref="RGD:11436072"
     exon            1..58
                     /gene="Flywch2"
                     /inference="alignment:Splign:2.1.0"
     exon            59..487
                     /gene="Flywch2"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..585
                     /gene="Flywch2"
                     /codon_start=1
                     /product="FLYWCH family member 2"
                     /protein_id="NP_001386528.1"
                     /db_xref="GeneID:108352059"
                     /db_xref="RGD:11436072"
                     /translation="MPLPQSSEQEGESMKATQEPAPQPGTDVVPAAPRKPRKFSKLVL
                     LTASKDSAKVAGAKRKGVHCIMSLGVPGPATLAKALLKTHPEAQRAIEATPPEPEQKR
                     SKPNLDTGGPEDNGGSGGSSSSPVETTALPKAPSASP"
     exon            488..674
                     /gene="Flywch2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaggctgag ggacccgcca cggctccgtc gtccgagagg cagggcctgc tgccgtcggg
       61 cagagcctct ggactcccag gttcctggcc agggaggagg aggaaaaagc aagacctatc
      121 tgccagggct gagcgtggcc tgagggccag gctgttggtc ctgggatgcc cctgccccag
      181 tccagtgagc aggagggtga gagcatgaag gccacccagg agccagctcc tcagcctggc
      241 acagatgtgg tcccagcagc ccccaggaag cccagaaaat tctccaaact ggtcctgctg
      301 acagcctcca aagacagcgc caaagtggct ggggccaagc gtaaaggagt gcactgcatc
      361 atgtccctgg gagtgccagg cccggccacc ttggctaagg ccctcctcaa gactcatcct
      421 gaggctcaac gggccattga agcaactccc ccggagcctg aacagaagcg cagcaagccg
      481 aacctggata caggtggacc agaagacaat ggagggtcag gagggtcgtc ttcaagtcca
      541 gtggagacca ctgcactccc taaggccccc agcgcttctc cataacctgg gcaactgctg
      601 ctgcataagt tacttttcta agtaagaaac aaaaaagaaa gagaaaataa aagaagctgc
      661 tgtttcccac catg
//
