LOCUS       XM_039091503            3947 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FLVCR heme transporter 1 (Flvcr1),
            transcript variant X1, mRNA.
ACCESSION   XM_039091503
VERSION     XM_039091503.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 1, 2024 this sequence was replaced by
            NM_001427625.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3947
                     /gene="Flvcr1"
                     /note="FLVCR heme transporter 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 179
                     samples with support for all annotated introns"
                     /db_xref="GeneID:108348225"
                     /db_xref="RGD:1596541"
     CDS             111..1817
                     /gene="Flvcr1"
                     /codon_start=1
                     /product="feline leukemia virus subgroup C
                     receptor-related protein 1"
                     /protein_id="XP_038947431.1"
                     /db_xref="GeneID:108348225"
                     /db_xref="RGD:1596541"
                     /translation="MARPDDEVGPAVAPGHPLEKGYLPVPRGAPDGEACVEPHDGPEA
                     LNGGPGLGRLVGGAPEGPQTLLAAEEETQARLLPAGGGEDVPCPARPPRTALSPRRFV
                     VLLIFSLYSLVNAFQWIQYSSISNVFEDFYQVSPLHINWLSMVYMVAYVPLIFPATWL
                     LDTRGLRLTALLGSGLNCLGAWVKCGSVKQHLFWVTMLGQILCSVAQVFILGLPSPVA
                     SVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPKTQNNNTGLLADTQNSTDLLDD
                     TQNSTDLLADNISIMFYGTAFVSTFLFFLTVIAFKERPLLPPSQAQAVLRDSPPAEYS
                     YKTSICNLFRNVPFVLLLISYGIMTGAFYSVSTLLNQIILTHYEGEEVNAGRIGLTLV
                     VAGMVGSILCGLWLDYTKTYKQTTLIVYILSFVGMVIFTFTLKLGYIIVVFFTGGILG
                     FFMTGYLPLGFEFAVEITYPESEGTSSGLLNTAAQIFGILFTLAQGKLTTDYNPEAGN
                     IFLCAWMFVGIILTALIKSDLRRHNINTGLTNSDVKAVPVDSLIDQKPKAMVSVQLES
                     SL"
ORIGIN      
        1 agctcagctt cacttagtca gccagccgcg ctggcgggcg cgcttcatcc tgtaagacct
       61 tgaagcccgc aaggcgggct gaggggcggc ggggcgggga gctgggaggc atggcgcggc
      121 ccgatgacga ggtggggccg gccgtggcgc ccgggcaccc gctggagaag gggtaccttc
      181 cggtgcccag gggcgccccg gatggggagg cgtgcgtgga gccgcatgac gggcctgagg
      241 cgctgaacgg aggccccggg ctcggccggc ttgtcggggg agccccggaa gggccgcaaa
      301 ccctgctagc ggcggaggag gagacccagg cccggctgct gcccgcgggc ggcggggagg
      361 atgtcccgtg ccccgcgcgc cccccgcgca ccgcgctgtc gccccggcgc ttcgtggttc
      421 tgctcatctt cagcctttac tcgctggtga acgccttcca gtggattcag tacagcagca
      481 tcagcaacgt gttcgaggac ttctaccaag tgtcgccgct gcacatcaac tggctgtcca
      541 tggtgtacat ggtggcctac gtgcccctca tcttcccggc cacctggctg ctggacacgc
      601 gaggcctgag gctcacggcg ctgctgggct ccggcctcaa ctgcctgggc gcctgggtca
      661 agtgcggcag cgtgaagcag cacctcttct gggtcaccat gctggggcag atcctgtgct
      721 cggtggccca ggtcttcatc ctaggcttac cctcccccgt cgcctcggta tggtttggac
      781 ccaaggaggt gtcgacggct tgtgccacag ctgtgctggg caatcagctt ggaactgcag
      841 ttggcttttt gttgccaccc gttctagtgc ccaagacaca gaataacaac acaggcctcc
      901 tggctgacac acagaatagc acagacctcc tggatgacac acagaatagc acagacctcc
      961 tagctgacaa catcagcatc atgttttatg gaacagcatt tgtctccaca tttttatttt
     1021 ttttaacagt aattgcattc aaggagaggc ctctgctgcc acccagtcag gctcaggcag
     1081 ttcttcgaga cagcccccct gcggagtact cctataagac ttctatctgc aacctgttca
     1141 ggaacgtccc ctttgttctc ctgctgatca gttatggtat aatgactgga gcattttatt
     1201 cagtttcaac attattaaat cagataatat tgacacatta tgagggagaa gaagtgaatg
     1261 ctggaaggat cgggctaaca ctggtggttg ctgggatggt gggctctatt ctttgtggct
     1321 tatggctgga ttacaccaaa acctacaagc agacaactct gatagtgtac attttgtctt
     1381 tcgttggaat ggtcatattt actttcacac tgaaactcgg gtacatcatc gtggtgtttt
     1441 ttactggtgg gatccttggc ttcttcatga ctggctacct ccccctgggc tttgagtttg
     1501 ctgtggagat cacttaccct gagtctgagg gcacgtcctc ggggctcctc aatactgctg
     1561 cacagatatt tggaatcttg ttcacattgg ctcaaggaaa gctcacaacg gactataatc
     1621 cagaggcagg aaacattttc ctctgtgcct ggatgttcgt cggcatcatt ttaacagcat
     1681 tgatcaagtc tgatctgaga agacacaaca taaacaccgg gctcacaaac agtgacgtta
     1741 aagctgtacc agttgatagt ctgatagatc aaaaaccaaa agcgatggtg tctgtacagt
     1801 tggaatcttc actctgaaga agggaaggcc attgcctctc aacatgggga tgtggcgtcg
     1861 tctgtgggca gctgtgtgag ttgtgagaca cttgaaaatt atcggatgaa ttccgaatat
     1921 tatgttgatt tgggcaataa ttttgcttaa agtgctcttg ctcacctcat gctaacactc
     1981 ctgttcacat aatacggtct attttcagtt gtgtgttgtg tacctgaaag taacattttt
     2041 gacatttttc aggatgcttt ggtatttttt atgggagtct agttcctgta agacatgggg
     2101 gtgcacaatt cacacacaaa aacacatcca gtatgttatt cccagtcagt tatcacctca
     2161 ctgtactgac acgtcagggt cacagtgtga gcgcagaata ccactcggac agggctgtgg
     2221 agtcgaggtt cccatgcctc atagcttgtt gtacagtgta ctgtgacact ttctggccca
     2281 caaaaacaaa caaacaagac agttctatgc acagactaag tccattattc tccagttagc
     2341 cagggagctg agacacacag aggtcctctg aggtcctcga tctgctaccc tcatgcagat
     2401 aatgcgaacg cagcacaact tggaatagca gctttacacc cgatgtccat tttcactctc
     2461 ttaaaagaaa ctttcatccc ctgtgctacg ggatagctca tgtttcttat atcacaccta
     2521 tattttgcct tgaagatgcc caagataagg aagtctgtga taacttcaaa gagcccgcgc
     2581 atctccattc tgtggagagc ccccgcatct ccattctgtg gagggccccc gcatctccat
     2641 tctgtggaga gcccccgcat ctccattctg tggagagccc ttgacatcct agctgcttgt
     2701 tccaggatca tccctctgac cactgttttt gaggactgcc agctttcgca catgttccat
     2761 gaatgccggg aacgggttct gctgcaccac agagtgtgtg cactcggtac tctatggaca
     2821 ctctcttaac acactcagga caaggcgaat gggaccaagt gtattttcac agtgcctgcc
     2881 actgtgtctt gtttacagtg agaattaaat gtctttgatg ttttgactct taagcttatg
     2941 ttcatgacat ttgatcaacc atactattta cgtagtgtga ttttgtaaat tttacaaaaa
     3001 atgtacataa tataaaagtg cacatagaag agataatcat gtaatgaatg tggtggagca
     3061 aatgcagctt tgatttaggc aaagcatgca ttgatttgtc ttggtattat attattcttt
     3121 tttatcaatt actataaatt atgtggaatt tgacagtgga tcactcagga tcaggaattc
     3181 tggttttgtg tcctggcatg ctcctgcctt ggtaactccg gacacaccat ttaccctctc
     3241 tgagagacag cattttcctg atccatgaaa taattcgttc acactgatct caaagatctt
     3301 tttaaaatac tgtcaatcat cacgaagcaa accaaatcac tgtaccacag gaattcagtc
     3361 agtctgtaat ggttcaggca ggacctgcat cgtcaacagt ttcttcggtg ttgatgtcag
     3421 aggttacaaa ggaccaaaaa tgcactgtct cccccagctg tttctatttt taaattgaca
     3481 gtgttgttta tggtgatcat ggacatgtta gctcctgacg ctttgaacaa gttacagatg
     3541 cgagttggaa tacttaatgt ctgaagtata ttcttgtttt gtctttcatt gtttggaaca
     3601 gggacaaagt gtgatgtaaa aatgcaaaaa gaattgatga tattctcagt gttttaagtg
     3661 gtaatgtatt agggaagact ttgatacaat tctgtgtgta ggtttagaag tagcagttgt
     3721 caccgcctgt gtctgcttta gtcagaagct gctgcatctg taaatgcttt tgttttgagg
     3781 atatcggagg aatagcattg aaaatgttta tgcagtaact ggaacggcac ctgtgtctca
     3841 tgtcatcatc cctgttctta tttttgctat tttttataat ttctctatgt gcctgttctt
     3901 cattatttca tacttaaaat aaatttattt ttttaatgct aacttta
//
