LOCUS       XM_039112804            2914 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FKBP prolyl isomerase 1B (Fkbp1b),
            transcript variant X9, mRNA.
ACCESSION   XM_039112804
VERSION     XM_039112804.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2914
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /note="FKBP prolyl isomerase 1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
     CDS             2143..2418
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X8"
                     /protein_id="XP_038968732.1"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
                     /translation="MIHLEPILMCKGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFE
                     EGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE"
ORIGIN      
        1 cccaggcctg cccctcccaa ggcagggctg ccctgtaagc ttctctcagg agggtcttgt
       61 ccatggatta tcctcaaagc ccagggcagc caggttgcct gtcaccagtt ttattctttt
      121 cctcacccac aaagaccatc tatggtgcca gactctggta aaatcaaacc tccagtttta
      181 caactgggta ccctggcctc cctgctcctt tctgatgttt cagatttatt ctgtaaggtc
      241 tgagaaccct caaaatcccc atttaccctg tttttctttt gtgccctgcc aacgccactg
      301 cagtgagaag ggtgtggtcg gtagccacac tgtctgcagg tgctgggaga atccagggga
      361 ggttgccaca agtctgctgt cttgaatgat gtgcgtttgc agacccaagg accaagggac
      421 attctatatt tattttatct tatgtgtatg tatgtatgtg tgcatgtgtg tatatgtatg
      481 tatgtgtgtg tatgtatgta tgcatgtatg tgtgccacat gcgtgcctgg tggaggtaag
      541 agatgtcagg tccctgatac tggagttatg gaggtttatg acccaccatg tgggtgctgg
      601 gaactgaagt ggggtgtttt ggaaaaaaaa aatcaacaag tactcttaac tcctgagcca
      661 tctccctcct ccccaccccc aggaacattc tagatgcgtt ctttagaact gctggaggaa
      721 gattgctggc aggtgtttgc tctaagaggt gtgaggactc tgccttgtga ctcgctcgct
      781 aatgtggcaa actctatggg tgagagccat ttagcataca gcaaggccag cttaattcct
      841 gggacatatt cagatggggc catttttagc aggttctcta ggccagcgtg aagcaccaga
      901 ttgggtctag cagatgatgt ggctgttttt ttaacagttg tatctccagc cactgatgtc
      961 agcacaggag ggctgtttta tctcctggtg atatagccta attaccctgg ggcctctgac
     1021 caggataatt gatttgtctc ttctacatgt tacggacgga ttattgttta tcagattaat
     1081 gagaccaaac atcctttttt ttttttaaag atttatttat ttactatata taattacact
     1141 gtcactgtct tcagacacac cataagaggg catcagatcc cattacagat agttgcgaac
     1201 caccttgtgg ctgctgggaa ttgaactcag gacctctgga agagcagtca gtgctcttaa
     1261 ctgctgagcc atctctccag ctcaccaaac atccttttgc agagtttccc aagtgtgtgt
     1321 acattgagta ggcatggccc attaaaagca tcagctacaa gtggttctgc tttgtgagac
     1381 cctgtcttat taatcaaata cagcaggaga ctgtaagaaa cttctagtaa acttttaaag
     1441 aattaaatat aatctgggcc tggtggccca cacctataat ccgtcacttg ggagtgggag
     1501 caagagcatc aaaagttcag tgccagcctg ggttgagtag tgagtttatg tgcctagtgc
     1561 ctgcacagac tggcagagga cattggattc tctgaaaccg gagttacaga cagttgagag
     1621 ttgtggtatg gttggcagga tttgaaccca ggtcctctgc aagagcagcc agtgctccta
     1681 aacactgagc cgtccctcaa gcctctcgac attagtcttt aatagtatct tttgagcaga
     1741 agttcttcat tttagtgagg tcatacttac cactcttctt catgcctaca tatttttctg
     1801 tgtttgcttc aaggaatctc ccactgtatt gtgaagttac tcatttattc ccgtttatta
     1861 tcacctggta gagatgttgg tggccgtgtt tgcttttctt ctctctctct ctgttttttt
     1921 ctattgtttc tgtcatttga gacactgtcc catgtgactt gaggttggct ttgagtttgt
     1981 tctgtagtca aggctggcct tgagttcctg gtcctcctgc ttccagctga acattgggat
     2041 tacagtgctc actgtcacac ccagctactt ggtagatatt ttgtgtggta gtatgcctac
     2101 tgctacttta ttaattttat tttattattc atatttaggt ctatgattca tctggaaccg
     2161 attctcatgt gtaaagggat gctccagaat ggcaagaaat tcgattcgtc cagagacaga
     2221 aacaaaccct tcaagttcag aattggcaag caggaagtca tcaaaggttt tgaagaaggc
     2281 gctgcccaga tgagcttggg gcagagggcg aagctgacct gcacccctga tgtggcatat
     2341 ggagctactg gccaccccgg tgtcatccct cccaatgcca ccctcatctt tgacgtggag
     2401 ctgctcaact tagagtgaag gcaggaagga agtcgaggtg gctggagaag gctcctgctc
     2461 tgtcctagcc tgctctctct gccactggga cggctcctcc aatgtagggc tcttgatcag
     2521 tgtgctgacc ccaccgcccc ttgacattat ctgttctttc tgcccaactt gctctgtatg
     2581 tgtcggccac ttaaccgtcc ccatacatct ttgcttgagg aaacttttag ttgcagatcc
     2641 aaacatttca gactgcattt tgtgtgatgc atgtggtagc cattcctgat cataggacac
     2701 agatctcgtt tgcacaatct atattgcctt acctgcactt aagccagata tacaaggtgc
     2761 tcagacatgc gctgtacatg gttacctgga gggacttgag ccagttacct ttgctgtcac
     2821 tttcttatct tctgttggct gctcacttta agcactgccc tctttggaaa tactatgtaa
     2881 aataaaggct ctgtgcttgg catcttcctg tcca
//
