LOCUS       XM_039112799             842 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FKBP prolyl isomerase 1B (Fkbp1b),
            transcript variant X2, mRNA.
ACCESSION   XM_039112799
VERSION     XM_039112799.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112799.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..842
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /note="FKBP prolyl isomerase 1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 38 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
     CDS             288..638
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X2"
                     /protein_id="XP_038968727.1"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
                     /translation="MGVEIETISPGDGRTFPKKGQICVVHYTGMLQNGKKFDSSRDRN
                     KPFKFRIGKQEVIKGFEEGAAQLCPCHLDVAFSRRILTVPVTSVFSAVTRSSRAPSEE
                     DQEQLRADTSAIAG"
ORIGIN      
        1 gcctgtgggt taatggtggt tagtctggcc aggatccgga gcagccacgt cagggtcgct
       61 tccctcgggc cccgccccgg ccgaccccac cttgtcgcac agctccaccc cgccgccccc
      121 ttcccggcgg cccctccccg cgcaggtcct gactccagcc gcacctcctc cggctctgca
      181 gtggcggcaa gaagacgagc cggagcgcct gcggggtccg gcctgagcag agccggggtc
      241 ggggcagccg cgaggacccc cttggaggcg gggcctgtgg gaccgcgatg ggcgtggaga
      301 tcgagaccat ctccccggga gacggaagga cattccctaa gaagggtcag atatgcgtgg
      361 tgcactacac agggatgctc cagaatggca agaaattcga ttcgtccaga gacagaaaca
      421 aacccttcaa gttcagaatt ggcaagcagg aagtcatcaa aggttttgaa gaaggcgctg
      481 cccagctctg cccctgtcac cttgatgtgg cctttagtcg ccgaatctta actgttcctg
      541 tcacaagtgt attcagcgct gttacacgtt cctcaagggc tccctctgaa gaggaccagg
      601 aacaattacg agcagacacg agtgccattg ctggataagc aataacactt gttgcttgaa
      661 tgaatctgag gctacttcgt ggctgctaac tgccccatag tcgagtctat tttgaggcag
      721 aatctgcatg ttcaagtgcg tggcttaact tcagtgtgcc aggaataaaa ttaatctctg
      781 ctctttggaa tgaccctaaa gatggtttgg gggaaatgcc atagttatct tccttttttc
      841 tt
//
