LOCUS       XM_039112798             814 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FKBP prolyl isomerase 1B (Fkbp1b),
            transcript variant X1, mRNA.
ACCESSION   XM_039112798
VERSION     XM_039112798.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112798.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..814
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /note="FKBP prolyl isomerase 1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 135 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
     CDS             16..621
                     /gene="Fkbp1b"
                     /gene_synonym="FKBP-12.6; FKBP-1B"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X1"
                     /protein_id="XP_038968726.1"
                     /db_xref="GeneID:58950"
                     /db_xref="RGD:61835"
                     /translation="MVVSLARIRSSHVRVASLGPRPGRPHLVAQLHPAAPFPAAPPRA
                     GPDSSRTSSGSAVAARRRAGAPAGSGLSRAGVGAAARTPLEAGPVGPRWAWRSRPSPR
                     ETEGHSLRRVRYAWCTTQGCSRMARNSIRPETETNPSSSELASRKSSKVLKKALPRIV
                     LGMQVENCSKRGRRSLHSLRAKGLNWSSFTYEASVLLLNYI"
ORIGIN      
        1 tcagcctgtg ggttaatggt ggttagtctg gccaggatcc ggagcagcca cgtcagggtc
       61 gcttccctcg ggccccgccc cggccgaccc caccttgtcg cacagctcca ccccgccgcc
      121 cccttcccgg cggcccctcc ccgcgcaggt cctgactcca gccgcacctc ctccggctct
      181 gcagtggcgg caagaagacg agccggagcg cctgcggggt ccggcctgag cagagccggg
      241 gtcggggcag ccgcgaggac ccccttggag gcggggcctg tgggaccgcg atgggcgtgg
      301 agatcgagac catctccccg ggagacggaa ggacattccc taagaagggt cagatatgcg
      361 tggtgcacta cacagggatg ctccagaatg gcaagaaatt cgattcgtcc agagacagaa
      421 acaaaccctt caagttcaga attggcaagc aggaagtcat caaaggtttt gaagaaggcg
      481 ctgcccagga ttgtattagg gatgcaagtt gagaactgtt caaagagggg gcggagaagt
      541 ttgcattcct taagggcaaa gggattaaac tggagttctt tcacatacga ggcaagtgtt
      601 ctactgctga actatatata accagccctt atcctgactt tatacattct ccatttcagg
      661 ggtcctagct ctcacttcaa cctcacacct tgaactctac actataatct gaattttaaa
      721 agcatgtatt tggaatgtgt catgtactgc gcactgagcg taacgttttc ctgactggta
      781 gtaaacagga attaaaaacc tcattcacaa tctg
//
