LOCUS       XM_039111061            4249 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FKBP prolyl isomerase family member 15
            (Fkbp15), transcript variant X1, mRNA.
ACCESSION   XM_039111061
VERSION     XM_039111061.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111061.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4249
                     /gene="Fkbp15"
                     /note="FKBP prolyl isomerase family member 15; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 108 ESTs, 1 long SRA read, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 215 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362528"
                     /db_xref="RGD:1304816"
     CDS             82..3720
                     /gene="Fkbp15"
                     /codon_start=1
                     /product="FK506-binding protein 15 isoform X1"
                     /protein_id="XP_038966989.1"
                     /db_xref="GeneID:362528"
                     /db_xref="RGD:1304816"
                     /translation="MFGAGDEDDTDFLSPSGGAKLASLFGLDQASVGHGNEFFQYTAP
                     KQPKKGQGIAATGNQSAPKPAPATTGTSSVLFATAVHAYRCINGQYAKQGKFGAAVLG
                     NHTTREYRILLYISQQQPVTVATIHLNFELMVRPNNYSTFYDDQRQNWSIMFESEKAA
                     VAFNKQVCVAKCNSISSLDAVLCQDLVAAEGPAVETGDSLEVAYTGWLLQNHVLGQVF
                     DSTANKDKPLRLKLGSGKVVKGLEDGLLGMKKGGKRLIITPSACAAASEGVIGWTQPT
                     DSILVFEVEVRRVKFARDSGSDGHSVSSRDSAAPSPIPAADSLSADPVVTPPLPLPLK
                     PGEPALRSKSSSVSEPLTSPDTAKAKLISRMAKMGQPMLPILPPQLDSNDSETEDATL
                     LRGAGPSLVTPSVQPSLQPSHPVLPQMASQAPQPAVSGLQTASAALMPAVSLDSHSAV
                     SGNAQNFQPYAGVQAYTYPQTSSVSSQLQPARPLYPAPLSQAPHFQGSGDMMSFLMTE
                     ARQHNTEIRMAVNKVADKMDHLMTKVEELQKHSTGNSMLLPSMSVTMETSMIMNNIQR
                     IIQENERLKQELLEKSSRIEEQNDKISDLIERNQRYVEQSNLMMEKRNNSLQTATENT
                     QARILHAEQEKAKVTEELAAATAQVSHLQLKMTAHQKKETELQLQLTENLKETDLLRG
                     QVTRLQADLLELREASEQTQTKFKSEKQSRRQLELKVTSLEEELTDLRAEKESLEKNL
                     SERKKKSAQERCQAEEEMDEIRKSHQEELDRLRQLLKKARVSTDQAAAEQLSLAQAEL
                     KSQWEAKCEHLLATAKDEHLQQYQEVCAQRDAYQQKLSHVQDECLALQAQIAAFTQQN
                     EHMQRLEKSKSQAPAGRAAADPSEKVKKIMNQVFQSLRGEFELEESYDGRTILRTIMH
                     TIKMVTLQLLNHQEEEQGECSSEEEKEEKPLRPSLEQPGPATPRTPLALPSEEPQEAP
                     KVLSEQVEGETTPLPLQALPMPENGAQTRKGEPSEPEVSSEIKDSSLPPEPAGFPAHR
                     VLGPPTSIPPKPPGPVTIDSESEETVAAGQRTLQPNSLLEEEHVREVATDGLLQGNPR
                     RLSLTPDPEKKEPPALDPESQEEPQPPVLKQAKDISSSGPCEVMDTERAAADTGASPR
                     HSQDSQHCSVSGDEEDELFKGATLKVPRPTAQPEEEDEDEVSMKGRPPPTPLFGDDDD
                     DDDIGWLG"
ORIGIN      
        1 ccacggcgtt ttacgttacc ggcggtgaca ggccctggta ccatccagtt tcctcccttc
       61 agctgggcga aagccgacgt gatgttcggt gcgggagacg aggatgacac cgacttcctc
      121 tcgccaagcg gcggagccaa gctggcttct ctttttggac tggaccaagc atctgtgggc
      181 catggaaatg aattcttcca gtatacagcc ccaaagcaac ctaagaaagg ccagggaata
      241 gcagcaacag gaaatcagtc agcaccaaaa ccagcaccag ctaccacagg cacatcctca
      301 gtgctgtttg ccactgcagt gcatgcgtac cgatgcataa acggtcaata tgcaaagcag
      361 ggcaaatttg gagcagctgt cctggggaac cacacaacaa gagagtatag gattcttctc
      421 tacatcagtc agcagcagcc agtgactgtt gctacaattc atctgaactt tgagctaatg
      481 gttcggccca ataactacag caccttttat gatgaccaga gacaaaactg gtctatcatg
      541 tttgagtcag agaaggccgc tgtggcattc aataaacagg tatgtgtggc caagtgcaat
      601 agcatttctt ccttggatgc agtgctgtgt caggacctgg ttgcagcaga gggtcctgct
      661 gtggaaactg gagattcttt agaagtagcc tatacgggct ggctccttca gaaccatgtg
      721 ctgggccagg tttttgattc tactgctaac aaagataagc cgcttcgcct gaaattagga
      781 tcaggaaaag ttgtcaaggg tttagaggat gggcttttgg gcatgaagaa aggaggaaag
      841 cgattgatta tcactccttc agcctgtgct gctgcctctg aaggagtgat aggctggact
      901 cagccaacag actccatcct ggtgtttgaa gtagaagtta ggcgggtcaa gtttgccaga
      961 gattctggct ctgatggcca cagtgtgagc tcccgggatt ctgcagcccc ctcccccatc
     1021 cctgctgctg acagcctctc agctgatcct gttgtgacac cacccctacc actgcctctc
     1081 aagcccgggg agccggctct tcgttccaaa tccagctctg tcagtgaacc gcttactagt
     1141 cctgatacag ccaaggccaa gctgatctct cggatggcta aaatgggcca gcccatgctg
     1201 cccatccttc ctccacagct ggattccaat gactcagaaa ccgaagatgc aactcttctt
     1261 cgaggagctg ggccgtccct tgtgacacca tctgtccaac cctctcttca gccatctcat
     1321 ccggtattac cacagatggc ctcacaggca cctcagccag ctgtttctgg gctccagacg
     1381 gcctctgctg ccttgatgcc agctgtatcc cttgattctc actcagctgt atctggaaat
     1441 gctcagaact tccagcccta tgcaggagtg caagcctaca cataccccca gacatcctca
     1501 gtttcttccc agctgcagcc tgctcggccc ttgtacccag cgccattgtc ccaggctccc
     1561 cactttcaag gatcaggtga tatgatgtcc tttctgatga ccgaagcccg gcaacacaac
     1621 actgaaattc gaatggcagt caacaaagtg gctgataaaa tggatcatct catgactaag
     1681 gtcgaagagt tacagaagca tagcactggc aattccatgc ttctccctag catgtcggtc
     1741 acaatggaaa caagcatgat tatgaacaac atccagcgaa tcatccagga aaatgagaga
     1801 ctgaaacagg agctccttga gaaaagcagt cggatagaag agcagaatga caagatcagt
     1861 gacctcattg aacgaaacca gaggtatgtt gagcagagta acctaatgat ggagaagagg
     1921 aacaactcgc ttcaaacagc cacagaaaac acacaggcaa gaatattgca tgctgaacaa
     1981 gagaaggcca aggtgacaga agagttggca gcagccacgg cacaggtctc tcacctgcag
     2041 ctgaaaatga ctgctcacca gaagaaggag acagagctgc agttgcaact gacagaaaac
     2101 ttgaaggaga cagatcttct caggggccaa gtcaccagac tccaggctga cctcttggag
     2161 cttcgagaag cctctgagca aacacagacc aaattcaaaa gtgaaaagca gagccggagg
     2221 cagctggagc tcaaggtaac atccctggag gaagagctga ctgacctccg agctgagaag
     2281 gagtcccttg aaaagaacct ctcagagagg aagaagaaat cagcccagga gcgctgccag
     2341 gcagaggagg agatggacga gattcgcaag tctcaccagg aggaactgga cagacttcgg
     2401 cagctcttga aaaaggctcg ggtgtccaca gaccaagcag ctgcagagca gctatctctt
     2461 gcacaggctg agctgaagag ccagtgggaa gcaaagtgtg agcatctttt ggccactgca
     2521 aaggatgaac acctgcagca gtaccaagaa gtgtgtgcgc agagggatgc ctaccagcag
     2581 aagctgtctc acgttcaaga tgagtgctta gctctccagg cccagatagc agccttcact
     2641 caacagaatg aacacatgca gcgactggag aagagtaagt cccaggcacc tgcaggcaga
     2701 gctgctgctg acccctcaga gaaggtcaag aagatcatga accaggtgtt ccagtcactg
     2761 aggggagagt ttgagctgga ggaatcttat gatggcagga ccattctgag gaccatcatg
     2821 cacacaatca agatggtgac tctgcagctg ttgaaccatc aggaggaaga gcagggagag
     2881 tgcagcagtg aggaggaaaa ggaggagaag cctctgagac cttccctgga gcagccaggc
     2941 cctgccactc ctaggacgcc tctagcactc ccaagtgagg agccacagga ggctcccaag
     3001 gtgctgtcag aacaggtaga aggggagacc accccactgc ctctacaggc tctccccatg
     3061 ccagagaatg gtgcacagac caggaaaggg gagccctcag aaccagaggt atcctcagaa
     3121 atcaaagaca gttctctccc gcctgagcca gctggcttcc cagcccacag agtactgggg
     3181 cccccgactt caatcccacc taaacctcca ggccctgtaa ctatagactc cgagtctgag
     3241 gagacagttg ctgctggcca gagaacactg cagcccaaca gcctattgga agaagaacat
     3301 gtcagggaag tagccacaga tggcctactg caaggaaacc ccaggagact gtcactgact
     3361 ccagaccctg agaagaaaga gccaccagcc ttagaccctg aaagccaaga agaacctcag
     3421 cctcctgtgc tcaaacaggc caaggacatt agtagctctg gtccctgtga ggtaatggac
     3481 acagagcgtg ctgcagcgga cacaggagca tcccccagac acagccagga ctcgcagcac
     3541 tgcagtgtct ctggggatga agaggacgag ctgtttaaag gggcaactct gaaggttccg
     3601 aggcccacag cccagcctga ggaggaggat gaagatgagg tgagcatgaa gggacgtccg
     3661 cccccaaccc ccctttttgg agatgatgat gatgacgatg acattggctg gctggggtga
     3721 agacctagga agcaggcatg caggcttctc tcccagccct tccctaagca tggttttgca
     3781 cagccggcct caggtctagg tgagcctcag ggtgaggtcc tggtgaacat tctgaggaca
     3841 gtggttcagg tgtctgagcc cccgcctgac ctggtgaaga ggaccatgag gctgtctgca
     3901 gaacaggtgt tgtaacagcc tcagtgagtg gccctaccat ggaggaaggg ctgggagggt
     3961 tgcctgcagc cagtcacaag caagctgcca tttctcccaa gctttttctt actcattctc
     4021 aaggagactg gaagccctcc tgctctccca gggctcatca gagttgctgc gacacgaggg
     4081 tcctcctcag agaactacga gatccatcgt gttggcctaa cctgtggctc tgggacatgt
     4141 atcttctatc tctgccttaa atcttacaaa agaggtcaat gggtatttgg aactaacaag
     4201 actaaaaatc tgtaataaaa cttgacttgg gcccttgagg agaaactga
//
