LOCUS       NM_001393809            2879 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus fidgetin-like 1 (Fignl1), transcript variant 3,
            mRNA.
ACCESSION   NM_001393809 XM_006251476
VERSION     NM_001393809.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Yuan,J. and Chen,J.
  TITLE     FIGNL1-containing protein complex is required for efficient
            homologous recombination repair
  JOURNAL   Proc Natl Acad Sci U S A 110 (26), 10640-10645 (2013)
   PUBMED   23754376
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   L'Hote,D., Vatin,M., Auer,J., Castille,J., Passet,B.,
            Montagutelli,X., Serres,C. and Vaiman,D.
  TITLE     Fidgetin-like1 is a strong candidate for a dynamic impairment of
            male meiosis leading to reduced testis weight in mice
  JOURNAL   PLoS One 6 (11), e27582 (2011)
   PUBMED   22110678
REFERENCE   3  (bases 1 to 2879)
  AUTHORS   Schraenen,A., de Faudeur,G., Thorrez,L., Lemaire,K., Van
            Wichelen,G., Granvik,M., Van Lommel,L., in't Veld,P. and Schuit,F.
  TITLE     mRNA expression analysis of cell cycle genes in islets of pregnant
            mice
  JOURNAL   Diabetologia 53 (12), 2579-2588 (2010)
   PUBMED   20886204
REFERENCE   4  (bases 1 to 2879)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   5  (bases 1 to 2879)
  AUTHORS   Park,S.J., Kim,S.J., Rhee,Y., Byun,J.H., Kim,S.H., Kim,M.H.,
            Lee,E.J. and Lim,S.K.
  TITLE     Fidgetin-like 1 gene inhibited by basic fibroblast growth factor
            regulates the proliferation and differentiation of osteoblasts
  JOURNAL   J Bone Miner Res 22 (6), 889-896 (2007)
   PUBMED   17352653
REFERENCE   6  (bases 1 to 2879)
  AUTHORS   Yu,Y., Panhuysen,C., Kranzler,H.R., Hesselbrock,V., Rounsaville,B.,
            Weiss,R., Brady,K., Farrer,L.A. and Gelernter,J.
  TITLE     Intronic variants in the dopa decarboxylase (DDC) gene are
            associated with smoking behavior in European-Americans and
            African-Americans
  JOURNAL   Hum Mol Genet 15 (14), 2192-2199 (2006)
   PUBMED   16740595
REFERENCE   7  (bases 1 to 2879)
  AUTHORS   Iwanaga,R., Komori,H., Ishida,S., Okamura,N., Nakayama,K.,
            Nakayama,K.I. and Ohtani,K.
  TITLE     Identification of novel E2F1 target genes regulated in cell
            cycle-dependent and independent manners
  JOURNAL   Oncogene 25 (12), 1786-1798 (2006)
   PUBMED   16288221
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Mar 16, 2021 this sequence version replaced XM_006251476.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY623032.1, SRR26643292.52788.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                JAXUCZ010000014.1  90590770-90590818   c
            50-165              JAXUCZ010000014.1  90588184-90588299   c
            166-2879            JAXUCZ010000014.1  90582289-90585002   c
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q21"
     gene            1..2879
                     /gene="Fignl1"
                     /note="fidgetin-like 1"
                     /db_xref="GeneID:289777"
                     /db_xref="RGD:1307112"
     exon            1..49
                     /gene="Fignl1"
                     /inference="alignment:Splign:2.1.0"
     exon            50..165
                     /gene="Fignl1"
                     /inference="alignment:Splign:2.1.0"
     exon            166..2879
                     /gene="Fignl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             176..2209
                     /gene="Fignl1"
                     /codon_start=1
                     /product="fidgetin-like protein 1"
                     /protein_id="NP_001380738.1"
                     /db_xref="GeneID:289777"
                     /db_xref="RGD:1307112"
                     /translation="METSSSRSVQVDDWQKNYSVVASSICTPKQKADAYRALLLHIQD
                     AYANSEISQVFATNLFKRYTEKYSAIIDSDNVVTGLNNYAESIFALAGSQQADSDKWQ
                     SGLSINNVFKMSTVQEMMQAGQKFKESLLEPADASVVMCKEPTIFEVPQLGVCGGSEE
                     ADLLSSSVHGTEKTQAIPGNSLRCSPFQSTLFPMATNTKTCLTSSAPSGESTTATFHR
                     TPLFGNTKKEPQSFPKTSTGLNMFLSNPSCVPSGCENPRERKAFNDSDTINMLSNPTL
                     NKAPSKTEDSGQREDNSLPTFKTAKEQLWADQKKRSHQSQHTSKSFNGAIKKSLGAGR
                     SRGIFGKFVPPVSNKQDGSEQNGNVKPKSSRAGSAEPAHLTDDRLKNVEPRMVELIMN
                     EIMDHGPPVHWEDIAGVEFAKATIKEIVVWPMMRPDIFTGLRGPPKGILLFGPPGTGK
                     TLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSL
                     LSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRL
                     YIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIR
                     SLHTADIATISPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGCGK"
ORIGIN      
        1 cttggaaggg cgcgcttttc ggtggctgct gtcccggcag ggagcgcagc tcaacctgtg
       61 ctgatcacat cgggaagtat tcagtacctg gtaaagtaca tggtgcttca cgtggaactt
      121 ggccttgatt tctggcattg gtcataatca gcagagttct ctctgagcct ttgacatgga
      181 gacatccagc tccaggtctg tgcaggtgga tgactggcag aagaattact ctgtggttgc
      241 atccagcata tgtacaccta agcagaaggc cgatgcatac cgtgcactgc tactgcatat
      301 tcaggatgca tatgccaact ccgagatctc tcaggtcttt gctaccaacc tgtttaagag
      361 gtatacagag aaatactctg caattattga ttctgacaat gttgtaactg gcttgaataa
      421 ctatgcagag agcatttttg ctttggcagg atctcaacag gctgacagtg acaagtggca
      481 atctggtttg tcaataaata atgttttcaa aatgagtact gtacaggaga tgatgcaagc
      541 tggtcagaaa tttaaagagt ctctgttgga acctgctgat gcatcagtag tcatgtgtaa
      601 agagcctacc atctttgagg ttcctcaact tggtgtttgt ggaggttctg aagaagctga
      661 cctgttatcc agttcagttc atggcacaga aaagacccaa gccattccag ggaacagtct
      721 gagatgttcc ccatttcaga gcactctgtt ccctatggca accaatacta agacatgtct
      781 cacctcctca gcaccttcag gtgagtcaac cactgctaca tttcacagga caccattatt
      841 tggaaacacc aaaaaggaac ctcaaagctt tccgaaaacc agcacaggac taaatatgtt
      901 cttatctaat ccatcttgtg ttccttctgg ctgtgaaaat cctcgagaaa ggaaggcttt
      961 taatgactct gacaccatta acatgctttc caatccaaca ctgaataaag ctcctagtaa
     1021 aacagaagac agtggccaaa gggaagataa tagcctgcct acctttaaaa ctgcaaaaga
     1081 acaattatgg gcagatcaga aaaaaaggag ccatcaatcc cagcacacct ctaaatcttt
     1141 taacggtgct ataaaaaagt ctctgggagc tgggagatcg agagggatat ttggaaagtt
     1201 tgttcctcct gtatctaata agcaagatgg aagtgagcag aatggaaatg tgaagcctaa
     1261 gtctagtagg gccgggtctg cagaaccagc tcacctcact gatgatcgcc taaagaacgt
     1321 ggaaccaaga atggttgaac ttattatgaa tgaaattatg gaccatgggc ctccagtaca
     1381 ttgggaagac attgctggag tagaatttgc caaagctaca ataaaggaaa ttgttgtgtg
     1441 gcccatgatg agaccagata tctttactgg attgcgaggg ccccctaaag gaattctgct
     1501 ctttggccct ccaggaactg gtaaaactct gattggcaag tgcattgcta gtcagtctgg
     1561 agcaacattc ttcagcattt ctgcttcttc actgacttct aagtgggtag gtgagggaga
     1621 aaaaatggtc cgggcattgt ttgctgttgc aaggtgtcag cagccagctg tgatatttat
     1681 tgatgaaatt gattctttat tgtctcaacg aggagatggt gaacatgaat cttcaagaag
     1741 gataaaaacg gaatttttag ttcagttaga tggagcaacc acgtcttctg aagaccgtat
     1801 tctcgtggtg ggagccacaa atcggcccca agagattgat gaagctgccc ggagaagatt
     1861 ggtaaaaaga ctttatattc ctctcccaga agcttcagcc aggaaacaga tagtagttaa
     1921 tctcatgtct aaggagcagt gttgcctcac tgatgaagaa acagaactgg tagtgcagca
     1981 gtctgacggg ttttcaggag cagatatgac acagctttgc agagaggctt ctcttggtcc
     2041 tattcgcagt ttgcacactg ctgacatcgc taccataagt ccagatcaag ttcgaccaat
     2101 agcttatatt gattttgaaa atgcttttag aactgtgcga ccttctgtgt ctccaaaaga
     2161 cttagagctt tatgaaaact ggaataaaac atttggttgt ggaaagtgaa tacatcgatt
     2221 gaaggcagaa gctgccatct aacagtttgg ataggaagca tgaaagcttg ggttgtgctt
     2281 cttgtattga agtatatcct gaattctgtg ctgcagatta gaatgataaa cttgactacg
     2341 gattgatata ttagtatgtt gtatttgtct tccagttata tgatatataa gttcatctca
     2401 tttaaataca atgacctttt gtttctaaat gaattcaaat tagaacttta gtctggtaat
     2461 aataaacttt gtcagtgtag tattaatatg gcttacattt gaaagagcat tgtgtacttg
     2521 gttagaatga aagcaacaga aagtaaacta cattaacccg ttcccgtttg taacttgttt
     2581 tgtgggcttt tttcctatca aaattaataa aaacatggtt agaaatagca agatataatt
     2641 ttgtatcagg gatgtggtct gcctcaaaca aaagacaatt aagtgtgttt ttttcaaggg
     2701 atctggaaag ttttgtgtta ctattttatc taataatact tttaaagcct attatctcac
     2761 ccttttccaa aactaaatgt tttttaattg ttgtattatt ttgttttgta aaatctgttc
     2821 gttgtagaaa cttaagacag aagcaaagag aataaaaatt gttagttttt taccacttt
//
