LOCUS       NM_001013088            1144 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus four and a half LIM domains 5 (Fhl5), mRNA.
ACCESSION   NM_001013088 XM_232849
VERSION     NM_001013088.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Wu,H., Chen,Y., Miao,S., Zhang,C., Zong,S., Koide,S.S. and Wang,L.
  TITLE     Sperm associated antigen 8 (SPAG8), a novel regulator of activator
            of CREM in testis during spermatogenesis
  JOURNAL   FEBS Lett 584 (13), 2807-2815 (2010)
   PUBMED   20488182
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Fimia,G.M., De Cesare,D. and Sassone-Corsi,P.
  TITLE     CBP-independent activation of CREM and CREB by the LIM-only protein
            ACT
  JOURNAL   Nature 398 (6723), 165-169 (1999)
   PUBMED   10086359
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079327.1.
            
            On Apr 20, 2005 this sequence version replaced XM_232849.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079327.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..1144
                     /gene="Fhl5"
                     /note="four and a half LIM domains 5"
                     /db_xref="GeneID:297954"
                     /db_xref="RGD:1307056"
     exon            1..116
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     exon            117..181
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     exon            182..352
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     CDS             194..1048
                     /gene="Fhl5"
                     /note="FHL-5"
                     /codon_start=1
                     /product="four and a half LIM domains protein 5"
                     /protein_id="NP_001013106.1"
                     /db_xref="GeneID:297954"
                     /db_xref="RGD:1307056"
                     /translation="MTSTQFDCQYCTASLLGKKYVLKDDNLYCISCYDRIFSNYCEQC
                     KEPIESDSKDLCYKNRHWHEGCFRCNKCHHSLVEKPFVAKDERLLCTDCYSNECSSKC
                     FHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPLISKESGNYCVPCFEKEFA
                     HYCNFCKKVITSGGITFRDQIWHKECFLCSGCRKELYEEAFMSKDDFPFCLDCYNHLY
                     AKKCAACTKPITGLRGAKFICFQDRQWHSECFNCGKCSVSLVGEGFLTQNMEILCRKC
                     GSGADTDM"
     exon            353..527
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     exon            528..697
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     exon            698..884
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1119
                     /gene="Fhl5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctatcctgag ttattttatt caaatccaac actcaagagt tctcacattt cccaataaag
       61 aactgatcgc ggcaagaaag aacatctcat ctgctgctct acaaagaact ccaaagattt
      121 ctcattttga tgaaactcat ggatgcagca cagtggcaga taactggaat tgcctctctg
      181 ggatacaact gaaatgacaa gtacacaatt tgattgtcaa tactgcacag catcccttct
      241 tgggaagaag tatgtactca aggatgataa tctatactgc atctcctgct acgatcgtat
      301 cttttctaac tattgtgagc agtgtaaaga accaatcgaa tcagattcta aggatctttg
      361 ttacaaaaac cgtcactggc atgaaggatg cttcaggtgc aacaagtgcc atcactcttt
      421 ggtggaaaag ccttttgttg ccaaggatga gcgcctgctg tgcacagact gctattccaa
      481 tgagtgttcc tccaagtgct tccactgcaa gagaaccatc atgccaggtt ctcggaaaat
      541 ggaatttaag ggcaattact ggcatgaaac ctgctttgtg tgtgagcact gccgacagcc
      601 aataggaacc aagcctttga tctcgaaaga gagtggcaat tattgtgtgc cctgttttga
      661 gaaggagttt gctcattact gcaacttctg taagaaggtg ataacttctg gtgggataac
      721 cttccgtgac cagatatggc ataaagagtg ctttctgtgc agcggctgca ggaaagagct
      781 ttatgaggag gcatttatgt caaaggatga tttcccattc tgcctggatt gctacaacca
      841 tctctatgct aaaaagtgtg cagcctgcac caaacccatc actggcctca gaggtgccaa
      901 gttcatctgc tttcaagacc gccagtggca cagtgagtgc ttcaactgtg gaaagtgctc
      961 ggtctccttg gttggggaag gattcttgac ccagaacatg gaaatcttat gccgcaagtg
     1021 tggctctgga gcagacactg acatgtagaa agagacaagt ctttccccac ctgaaatcca
     1081 atttgtcctt gctctcacta aatctggaac ttattggcaa aaaaaaaaaa aaaaaaaaaa
     1141 aaaa
//
