LOCUS       XM_039093631            1065 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fragile histidine triad diadenosine
            triphosphatase (Fhit), transcript variant X7, mRNA.
ACCESSION   XM_039093631
VERSION     XM_039093631.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093631.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1065
                     /gene="Fhit"
                     /note="fragile histidine triad diadenosine triphosphatase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 ESTs, 18 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 21 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
     CDS             273..764
                     /gene="Fhit"
                     /codon_start=1
                     /product="bis(5'-adenosyl)-triphosphatase isoform X4"
                     /protein_id="XP_038949559.1"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
                     /translation="MEKGPDPIYRCETMSFRFGQHLIKPSVVFLKTELSFALVNRKPV
                     VPGHVLVCPLRPVERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAG
                     QTVKHVHVHILPRKSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRAY
                     FQA"
ORIGIN      
        1 ttatattctt acaatggttc tcctgtgaaa ctttaaattt tagagctgaa ataagcctca
       61 agatagcacg tgacctagct tctgtttcct ggggaagggg agatagagaa agatgtggtc
      121 tgtctagagc agaaataaaa cccccatcct aatacctcta aattttatct gaggcattgt
      181 atctcctgtt gaaaacggct gctagacatt ttctgagtca ttactcaaat gactcatgct
      241 ctatttagtg tgtgtgtgtg tgtgtgggat acatggagaa gggaccagat ccaatctaca
      301 gatgtgagac catgtcattt agattcggcc aacatctcat caagccctct gtggttttcc
      361 tcaaaaccga actgtccttt gccctggtga ataggaaacc cgttgtacct ggccatgtcc
      421 tcgtgtgtcc actgaggcca gtggagcgct tccgtgactt acgtcctgat gaagtggccg
      481 atttgtttca agtgacacag agagttggga cagtggtgga gaagcatttc caggggacct
      541 ccatcacctt ctccatgcaa gatggtcctg aagctggaca gactgtgaag catgtacatg
      601 tccacattct tcccaggaag tcaggagact tccgcaggaa tgacaacatc tatgatgagc
      661 ttcaaaaaca tgacagagaa gaagaggact caccagcctt ttggagatct gaggaggaga
      721 tggctgcaga ggcggaagtt ctgagggcct actttcaggc atgagagaaa tgcaaacaaa
      781 tcccaaggca taagaaaatg ggcctcattc ttctggactc tgcaacattg gaaatgaagc
      841 taaccacctt atattgtgcc catgatcctg caactctgtg caaagcgttt tattgcatgt
      901 gtggaagcca ctgacaatat gcttcaatca tgatgacaga cagctagctt cccagacagt
      961 agcattgaca acctgccata gtttcctagt tatgtactta gaatggtacc atttccaaac
     1021 tgtcccttat cctgaatgga aataaagtgg ttgctaaaat attta
//
