LOCUS       XM_039093629            1246 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fragile histidine triad diadenosine
            triphosphatase (Fhit), transcript variant X5, mRNA.
ACCESSION   XM_039093629
VERSION     XM_039093629.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1246
                     /gene="Fhit"
                     /note="fragile histidine triad diadenosine triphosphatase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
     CDS             392..937
                     /gene="Fhit"
                     /codon_start=1
                     /product="bis(5'-adenosyl)-triphosphatase isoform X3"
                     /protein_id="XP_038949557.1"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
                     /translation="MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPV
                     ERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPR
                     KSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRAYFQILLEMPTQQSF
                     TRAREDRTPERRASIWAVLPY"
ORIGIN      
        1 cgcaggttgc tgtggggatt gtagttcgtc ccgtttgggc ctgctgtggg acttttcccg
       61 tcagctccct gatccacccc agtggggaca cgctcaggcg acactcctgt cccgtgctcc
      121 cgccctcttg cctttcattc cagccgacaa gaccttggaa gctttgaagc ccagcaaaga
      181 agggaaatcc actgagaaga gtctggaaag tgtttgtcat accaacagag aaaccaagct
      241 tgggcaaggt gtcaagtatc ttggtgaagg ataaggggca gagatacaca aaggtgtcct
      301 aggacaacct gcttggtcac ttgctctgca aaaactctcc atcttgcact gaggatctga
      361 aggaggtata ctcatctaca cgtgtgagac catgtcattt agattcggcc aacatctcat
      421 caagccctct gtggttttcc tcaaaaccga actgtccttt gccctggtga ataggaaacc
      481 cgttgtacct ggccatgtcc tcgtgtgtcc actgaggcca gtggagcgct tccgtgactt
      541 acgtcctgat gaagtggccg atttgtttca agtgacacag agagttggga cagtggtgga
      601 gaagcatttc caggggacct ccatcacctt ctccatgcaa gatggtcctg aagctggaca
      661 gactgtgaag catgtacatg tccacattct tcccaggaag tcaggagact tccgcaggaa
      721 tgacaacatc tatgatgagc ttcaaaaaca tgacagagaa gaagaggact caccagcctt
      781 ttggagatct gaggaggaga tggctgcaga ggcggaagtt ctgagggcct actttcagat
      841 attactggag atgccaacac agcaaagttt tacacgggcg agagaagaca ggactccaga
      901 gaggcgagcc agcatttggg ctgttcttcc atactgaagg catgagagaa atgcaaacaa
      961 atcccaaggc ataagaaaat gggcctcatt cttctggact ctgcaacatt ggaaatgaag
     1021 ctaaccacct tatattgtgc ccatgatcct gcaactctgt gcaaagcgtt ttattgcatg
     1081 tgtggaagcc actgacaata tgcttcaatc atgatgacag acagctagct tcccagacag
     1141 tagcattgac aacctgccat agtttcctag ttatgtactt agaatggtac catttccaaa
     1201 ctgtccctta tcctgaatgg aaataaagtg gttgctaaaa tattta
//
