LOCUS       XM_039093627            1163 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fragile histidine triad diadenosine
            triphosphatase (Fhit), transcript variant X3, mRNA.
ACCESSION   XM_039093627
VERSION     XM_039093627.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1163
                     /gene="Fhit"
                     /note="fragile histidine triad diadenosine triphosphatase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 18 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
     CDS             309..854
                     /gene="Fhit"
                     /codon_start=1
                     /product="bis(5'-adenosyl)-triphosphatase isoform X3"
                     /protein_id="XP_038949555.1"
                     /db_xref="GeneID:60398"
                     /db_xref="RGD:620448"
                     /translation="MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPV
                     ERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPR
                     KSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRAYFQILLEMPTQQSF
                     TRAREDRTPERRASIWAVLPY"
ORIGIN      
        1 cgcaggttgc tgtggggatt gtagttcgtc ccgtttgggc ctgctgtggg acttttcccg
       61 tcagctccct gatccacccc agtggggaca cgctcaggcg acactcctgt cccgtgctcc
      121 cgccctcttg cctttcattc cagccgacaa gaccttggaa gctttgaagc ccagcaaaga
      181 agggaaatcc actgagaaga gtctggaaag gtgtcctagg acaacctgct tggtcacttg
      241 ctctgcaaaa actctccatc ttgcactgag gatctgaagg aggtatactc atctacacgt
      301 gtgagaccat gtcatttaga ttcggccaac atctcatcaa gccctctgtg gttttcctca
      361 aaaccgaact gtcctttgcc ctggtgaata ggaaacccgt tgtacctggc catgtcctcg
      421 tgtgtccact gaggccagtg gagcgcttcc gtgacttacg tcctgatgaa gtggccgatt
      481 tgtttcaagt gacacagaga gttgggacag tggtggagaa gcatttccag gggacctcca
      541 tcaccttctc catgcaagat ggtcctgaag ctggacagac tgtgaagcat gtacatgtcc
      601 acattcttcc caggaagtca ggagacttcc gcaggaatga caacatctat gatgagcttc
      661 aaaaacatga cagagaagaa gaggactcac cagccttttg gagatctgag gaggagatgg
      721 ctgcagaggc ggaagttctg agggcctact ttcagatatt actggagatg ccaacacagc
      781 aaagttttac acgggcgaga gaagacagga ctccagagag gcgagccagc atttgggctg
      841 ttcttccata ctgaaggcat gagagaaatg caaacaaatc ccaaggcata agaaaatggg
      901 cctcattctt ctggactctg caacattgga aatgaagcta accaccttat attgtgccca
      961 tgatcctgca actctgtgca aagcgtttta ttgcatgtgt ggaagccact gacaatatgc
     1021 ttcaatcatg atgacagaca gctagcttcc cagacagtag cattgacaac ctgccatagt
     1081 ttcctagtta tgtacttaga atggtaccat ttccaaactg tcccttatcc tgaatggaaa
     1141 taaagtggtt gctaaaatat tta
//
