LOCUS       XM_039094195            1143 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibrinogen-like 1 (Fgl1), transcript
            variant X1, mRNA.
ACCESSION   XM_039094195
VERSION     XM_039094195.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094195.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1143
                     /gene="Fgl1"
                     /gene_synonym="Frep1; Lfire1"
                     /note="fibrinogen-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 5 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:246186"
                     /db_xref="RGD:620169"
     CDS             125..961
                     /gene="Fgl1"
                     /gene_synonym="Frep1; Lfire1"
                     /codon_start=1
                     /product="fibrinogen-like protein 1 isoform X1"
                     /protein_id="XP_038950123.1"
                     /db_xref="GeneID:246186"
                     /db_xref="RGD:620169"
                     /translation="MGEIRSFVLITVALILGKESWVLGDENCLQEQVRLRAQVRQLET
                     RVKQQQVVIAQLLHEKEVQFLDRGQEDSFIDLGGKRHYADCSEIYNDGFKHSGFYKIK
                     PLQSLAEFSVYCDMSDGGGWTVIQRRSDGSENFNRGWNDYENGFGNFVQSNGEYWLGN
                     KNINLLTMQGDYTLKIDLTDFEKNSRFAQYEKFKVGDEKSFYELNIGEYSGTAGDSLS
                     GTFHPEVQWWASHQTMKFSTRDRDNDNYNGNCAEEEQSGWWFNRSSCSQVGRIRGRSV
                     HA"
ORIGIN      
        1 ccgacatcta atcaaatagc aggggaaacc atttgtaatt ctgacttcag ttagaagttc
       61 ctgggaggcc ctgtgtagac ccagcctagc tgagtactga ttcattttga tgtgagtggg
      121 aagaatgggg gagattcgca gctttgtcct catcactgtt gctctgattc tgggcaagga
      181 gagctgggtc ctcggagatg agaactgttt gcaggagcag gtcaggctca gggctcaggt
      241 gcgccagctt gagacccggg tcaaacaaca acaggtggtg attgcacagc tcttgcacga
      301 gaaggaggtc cagttcctgg atagaggaca ggaggacagc ttcattgacc ttggaggcaa
      361 gaggcattac gcagattgtt cagagattta caatgatgga tttaaacata gtgggtttta
      421 caaaatcaaa cctcttcaga gtctggcaga attctctgtt tattgtgata tgtctgatgg
      481 aggaggatgg actgtaattc agagacgatc tgacggcagt gagaacttta acaggggttg
      541 gaacgactat gaaaatggct ttggaaactt tgtccaaagc aatggtgaat actggctggg
      601 taacaaaaac attaacttgc tgactatgca aggagactac actttaaaaa tcgacctgac
      661 agactttgag aaaaacagcc gcttcgcaca atacgaaaaa tttaaagttg gcgatgaaaa
      721 gtctttttac gaactgaata ttggagaata ttctggcacc gccggagact ccctgtcggg
      781 aacatttcac cctgaagtgc agtggtgggc tagtcaccaa acaatgaagt tcagcacacg
      841 ggacagagac aacgacaact acaacgggaa ctgtgctgag gaggaacagt ctggctggtg
      901 gtttaacaga agctcatgta gccaggttgg cagaatcaga ggcagaagcg tccatgccta
      961 gctgacatca gagtggtata ttcaatgcag atacaacgag cttaaggtgt cactctgcaa
     1021 acctgaacgg cgtgtactac caaggtccct acagagcaga aaccgataat ggtgttgtct
     1081 ggtacacctg gcgtgggtgg tggtattcct tgaaatctgt ggttatgaaa attaggccca
     1141 gtg
//
