LOCUS       XM_039101712            2076 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibrinogen gamma chain (Fgg),
            transcript variant X2, mRNA.
ACCESSION   XM_039101712
VERSION     XM_039101712.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2076
                     /gene="Fgg"
                     /note="fibrinogen gamma chain; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 241 ESTs, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     23 samples with support for all annotated introns"
                     /db_xref="GeneID:24367"
                     /db_xref="RGD:2613"
     CDS             38..1372
                     /gene="Fgg"
                     /codon_start=1
                     /product="fibrinogen gamma chain isoform X2"
                     /protein_id="XP_038957640.1"
                     /db_xref="GeneID:24367"
                     /db_xref="RGD:2613"
                     /translation="MNWSLQLRSFILCWALLLLSPTGLAYTATRDNCCILDERFGSYC
                     PTTCGISDFLNSYQTDVDTDLQTLENILQRAENRTTEAKELIKAIQVYYNPDQPPKPG
                     MIEGATQKSKKMVEEILKYEALLLTHESSIRYLQDIYTSNKQKITNLKQKVAQLEAQC
                     QEPCKDSVRIHDTTGKDCQDIANKGAKESGLYFIRPLKATQQFLVYCEIDGSGNGWTV
                     LQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISMQSTIPYALRIQLK
                     DWSGRTSTADYAMFRVGPESDKYRLTYAYFIGGDAGDAFDGYDFGDDPSDKFFTSHNG
                     MHFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKSSTPNGYDNGI
                     IWATWKTRWYSMKETTMKIIPFNRLSIGDGQQHHMGGSKQVSVEHEVDVEYP"
ORIGIN      
        1 gctgtaaggg gctgggagca ccggtcaccc agacactatg aattggtcct tgcaactccg
       61 gagtttcatt ctatgctggg cgcttttact actttctcca acgggcctgg catacactgc
      121 tactagagat aactgttgca tcctagatga gagattcggt agttactgcc caaccacttg
      181 tggcatctca gacttcctga attcttacca aaccgacgtg gacactgacc tccagactct
      241 ggaaaacatc ttacaacgag ctgaaaacag aaccacagaa gccaaggaac tgattaaagc
      301 catccaggtt tactacaacc cagaccaacc cccaaagccg ggtatgatag agggtgccac
      361 tcagaagtct aagaagatgg tagaagaaat cttgaagtac gaagcactgt tactaaccca
      421 tgagtcgagt atccggtatt tacaggacat ctatacttca aataagcaga agatcacgaa
      481 cctgaaacag aaggtggccc agcttgaagc tcagtgccag gagccttgca aggactctgt
      541 gcgaatccat gacacaaccg gaaaagattg tcaggatatc gccaacaagg gtgccaaaga
      601 aagtggactt tacttcattc ggcctttgaa agccacgcag cagttcttag tgtactgtga
      661 aatcgacgga tctggaaatg gctggaccgt attgcagaag aggcttgatg gcagtgtgga
      721 tttcaagaag aactggattc agtataaaga aggatttgga cacctgtcac ctactggcac
      781 cacagagttt tggctgggca atgagaagat tcatctgata agcatgcagt ccaccatccc
      841 atacgcactg agaatacagc tcaaagactg gagtggcagg accagcaccg cggactatgc
      901 catgttcagg gtgggtcctg aatccgacaa ataccgcctg acctatgcct acttcattgg
      961 cggagatgcc ggggatgcct tcgacggcta cgattttggt gatgatccca gtgacaagtt
     1021 tttcacatcc cacaacggca tgcacttcag tacctgggac aatgacaacg acaagttcga
     1081 aggcaactgt gctgagcagg atggatctgg ctggtggatg aacaagtgtc acgctggcca
     1141 cctcaatgga gtttattacc aaggtggcac ttactccaag tcatctactc ctaacggtta
     1201 tgacaatggc attatttggg ccacctggaa aacccgctgg tattccatga aggaaaccac
     1261 catgaagata attcccttca acagactctc cattggagat gggcagcaac atcacatggg
     1321 aggatccaaa caggtcagcg tggagcatga agtggatgtt gaatacccgt aaatcctctg
     1381 cctggacatt ttaaattaga cacaaagaat caactattaa cttctattag cctgtaccaa
     1441 gttccaatag tttcctcaaa ttttcttcta tacctctata ttcgagttat taattttggt
     1501 ctctcttaaa atgatattta gccataaatg gacattaaac cccacgtgaa ccatgtttct
     1561 aagttacttg aatcaaagtt attaaaattt gtttgtttga atggacaaca ttttgtttga
     1621 cctttcccct aaatattaaa agtaaaacta ctgtacttta ttttatgatc agctgtaatt
     1681 attgtttttg ttgttgttgt ttcctgagta tttttagtat gcactaataa aataggagaa
     1741 atttttagaa cttcacctgt atattttcca tgtattttac ctctacatca ttagtattta
     1801 attcttcttt ttaaatgaaa agttatattt tttaatatac cttttgtttt attgtgtatt
     1861 cataggttgg agacatgtaa agaacatttc caaggtgatt tgctctttta acggacttta
     1921 tccaagcaga gagatatatt tttcctatga gaccatggaa cctcacttcc tttacagagt
     1981 taatgggatc catgatgcaa actccattag cagttttatg ctggcgataa tttatctaca
     2041 tgcatttcaa taaacatttt gtttcctaag atgaga
//
