LOCUS       XM_006232525            2222 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus fibrinogen gamma chain (Fgg),
            transcript variant X1, mRNA.
ACCESSION   XM_006232525
VERSION     XM_006232525.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2222
                     /gene="Fgg"
                     /note="fibrinogen gamma chain; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 224 ESTs, 62 long SRA reads, 1 Protein"
                     /db_xref="GeneID:24367"
                     /db_xref="RGD:2613"
     CDS             181..1518
                     /gene="Fgg"
                     /codon_start=1
                     /product="fibrinogen gamma chain isoform X1"
                     /protein_id="XP_006232587.1"
                     /db_xref="GeneID:24367"
                     /db_xref="RGD:2613"
                     /translation="MNWSLQLRSFILCWALLLLSPTGLAQYTATRDNCCILDERFGSY
                     CPTTCGISDFLNSYQTDVDTDLQTLENILQRAENRTTEAKELIKAIQVYYNPDQPPKP
                     GMIEGATQKSKKMVEEILKYEALLLTHESSIRYLQDIYTSNKQKITNLKQKVAQLEAQ
                     CQEPCKDSVRIHDTTGKDCQDIANKGAKESGLYFIRPLKATQQFLVYCEIDGSGNGWT
                     VLQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISMQSTIPYALRIQL
                     KDWSGRTSTADYAMFRVGPESDKYRLTYAYFIGGDAGDAFDGYDFGDDPSDKFFTSHN
                     GMHFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKSSTPNGYDNG
                     IIWATWKTRWYSMKETTMKIIPFNRLSIGDGQQHHMGGSKQVSVEHEVDVEYP"
     polyA_site      2222
                     /gene="Fgg"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agcacaggtg agagccagaa tgagcagaaa gagcccacat ttctggtaaa gagaccccgt
       61 gaccagttcc agccactctt agtcccgccc agactgggaa ttcatataaa ggcccaagga
      121 gagcccaaga ggtcacagtg ctggctgtaa ggggctggga gcaccggtca cccagacact
      181 atgaattggt ccttgcaact ccggagtttc attctatgct gggcgctttt actactttct
      241 ccaacgggcc tggcacagta cactgctact agagataact gttgcatcct agatgagaga
      301 ttcggtagtt actgcccaac cacttgtggc atctcagact tcctgaattc ttaccaaacc
      361 gacgtggaca ctgacctcca gactctggaa aacatcttac aacgagctga aaacagaacc
      421 acagaagcca aggaactgat taaagccatc caggtttact acaacccaga ccaaccccca
      481 aagccgggta tgatagaggg tgccactcag aagtctaaga agatggtaga agaaatcttg
      541 aagtacgaag cactgttact aacccatgag tcgagtatcc ggtatttaca ggacatctat
      601 acttcaaata agcagaagat cacgaacctg aaacagaagg tggcccagct tgaagctcag
      661 tgccaggagc cttgcaagga ctctgtgcga atccatgaca caaccggaaa agattgtcag
      721 gatatcgcca acaagggtgc caaagaaagt ggactttact tcattcggcc tttgaaagcc
      781 acgcagcagt tcttagtgta ctgtgaaatc gacggatctg gaaatggctg gaccgtattg
      841 cagaagaggc ttgatggcag tgtggatttc aagaagaact ggattcagta taaagaagga
      901 tttggacacc tgtcacctac tggcaccaca gagttttggc tgggcaatga gaagattcat
      961 ctgataagca tgcagtccac catcccatac gcactgagaa tacagctcaa agactggagt
     1021 ggcaggacca gcaccgcgga ctatgccatg ttcagggtgg gtcctgaatc cgacaaatac
     1081 cgcctgacct atgcctactt cattggcgga gatgccgggg atgccttcga cggctacgat
     1141 tttggtgatg atcccagtga caagtttttc acatcccaca acggcatgca cttcagtacc
     1201 tgggacaatg acaacgacaa gttcgaaggc aactgtgctg agcaggatgg atctggctgg
     1261 tggatgaaca agtgtcacgc tggccacctc aatggagttt attaccaagg tggcacttac
     1321 tccaagtcat ctactcctaa cggttatgac aatggcatta tttgggccac ctggaaaacc
     1381 cgctggtatt ccatgaagga aaccaccatg aagataattc ccttcaacag actctccatt
     1441 ggagatgggc agcaacatca catgggagga tccaaacagg tcagcgtgga gcatgaagtg
     1501 gatgttgaat acccgtaaat cctctgcctg gacattttaa attagacaca aagaatcaac
     1561 tattaacttc tattagcctg taccaagttc caatagtttc ctcaaatttt cttctatacc
     1621 tctatattcg agttattaat tttggtctct cttaaaatga tatttagcca taaatggaca
     1681 ttaaacccca cgtgaaccat gtttctaagt tacttgaatc aaagttatta aaatttgttt
     1741 gtttgaatgg acaacatttt gtttgacctt tcccctaaat attaaaagta aaactactgt
     1801 actttatttt atgatcagct gtaattattg tttttgttgt tgttgtttcc tgagtatttt
     1861 tagtatgcac taataaaata ggagaaattt ttagaacttc acctgtatat tttccatgta
     1921 ttttacctct acatcattag tatttaattc ttctttttaa atgaaaagtt atatttttta
     1981 atataccttt tgttttattg tgtattcata ggttggagac atgtaaagaa catttccaag
     2041 gtgatttgct cttttaacgg actttatcca agcagagaga tatatttttc ctatgagacc
     2101 atggaacctc acttccttta cagagttaat gggatccatg atgcaaactc cattagcagt
     2161 tttatgctgg cgataattta tctacatgca tttcaataaa cattttgttt cctaagatga
     2221 ga
//
