LOCUS       NM_053428               2008 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus fibroblast growth factor 13 (Fgf13), mRNA.
ACCESSION   NM_053428
VERSION     NM_053428.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Favuzzi,E., Deogracias,R., Marques-Smith,A., Maeso,P., Jezequel,J.,
            Exposito-Alonso,D., Balia,M., Kroon,T., Hinojosa,A.J., F Maraver,E.
            and Rico,B.
  TITLE     Distinct molecular programs regulate synapse specificity in
            cortical inhibitory circuits
  JOURNAL   Science 363 (6425), 413-417 (2019)
   PUBMED   30679375
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Hennessey,J.A., Wei,E.Q. and Pitt,G.S.
  TITLE     Fibroblast growth factor homologous factors modulate cardiac
            calcium channels
  JOURNAL   Circ Res 113 (4), 381-388 (2013)
   PUBMED   23804213
  REMARK    GeneRIF: Fibroblast growth factor homologous factors (FGF11-14)
            modulate cardiac calcium channels.
REFERENCE   3  (bases 1 to 2008)
  AUTHORS   Irwin,L.N. and Byers,D.M.
  TITLE     Novel odors affect gene expression for cytokines and proteinases in
            the rat amygdala and hippocampus
  JOURNAL   Brain Res 1489, 1-7 (2012)
   PUBMED   23103411
REFERENCE   4  (bases 1 to 2008)
  AUTHORS   Wu,Q.F., Yang,L., Li,S., Wang,Q., Yuan,X.B., Gao,X., Bao,L. and
            Zhang,X.
  TITLE     Fibroblast growth factor 13 is a microtubule-stabilizing protein
            regulating neuronal polarization and migration
  JOURNAL   Cell 149 (7), 1549-1564 (2012)
   PUBMED   22726441
REFERENCE   5  (bases 1 to 2008)
  AUTHORS   Wang,C., Hennessey,J.A., Kirkton,R.D., Wang,C., Graham,V.,
            Puranam,R.S., Rosenberg,P.B., Bursac,N. and Pitt,G.S.
  TITLE     Fibroblast growth factor homologous factor 13 regulates Na+
            channels and conduction velocity in murine hearts
  JOURNAL   Circ Res 109 (7), 775-782 (2011)
   PUBMED   21817159
REFERENCE   6  (bases 1 to 2008)
  AUTHORS   Wittmack,E.K., Rush,A.M., Craner,M.J., Goldfarb,M., Waxman,S.G. and
            Dib-Hajj,S.D.
  TITLE     Fibroblast growth factor homologous factor 2B: association with
            Nav1.6 and selective colocalization at nodes of Ranvier of dorsal
            root axons
  JOURNAL   J Neurosci 24 (30), 6765-6775 (2004)
   PUBMED   15282281
  REMARK    GeneRIF: FHF2B is selectively localized at nodes of dorsal root
            sensory but not ventral root motor axons. This may provide a basis
            for physiological differences in Na currents that have been
            reported at the nodes of Ranvier in sensory versus motor axons.
REFERENCE   7  (bases 1 to 2008)
  AUTHORS   Schoorlemmer,J. and Goldfarb,M.
  TITLE     Fibroblast growth factor homologous factors and the islet brain-2
            scaffold protein regulate activation of a stress-activated protein
            kinase
  JOURNAL   J Biol Chem 277 (51), 49111-49119 (2002)
   PUBMED   12244047
REFERENCE   8  (bases 1 to 2008)
  AUTHORS   Munoz-Sanjuan,I., Smallwood,P.M. and Nathans,J.
  TITLE     Isoform diversity among fibroblast growth factor homologous factors
            is generated by alternative promoter usage and differential
            splicing
  JOURNAL   J Biol Chem 275 (4), 2589-2597 (2000)
   PUBMED   10644718
REFERENCE   9  (bases 1 to 2008)
  AUTHORS   Greene,J.M., Li,Y.L., Yourey,P.A., Gruber,J., Carter,K.C.,
            Shell,B.K., Dillon,P.A., Florence,C., Duan,D.R., Blunt,A.,
            Ornitz,D.M., Ruben,S.M. and Alderson,R.F.
  TITLE     Identification and characterization of a novel member of the
            fibroblast growth factor family
  JOURNAL   Eur J Neurosci 10 (5), 1911-1925 (1998)
   PUBMED   9751161
REFERENCE   10 (bases 1 to 2008)
  AUTHORS   Smallwood,P.M., Munoz-Sanjuan,I., Tong,P., Macke,J.P., Hendry,S.H.,
            Gilbert,D.J., Copeland,N.G., Jenkins,N.A. and Nathans,J.
  TITLE     Fibroblast growth factor (FGF) homologous factors: new members of
            the FGF family implicated in nervous system development
  JOURNAL   Proc Natl Acad Sci U S A 93 (18), 9850-9857 (1996)
   PUBMED   8790420
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            [WARNING] On Jul 19, 2024 this sequence was replaced by
            NM_053428.3.
            
            On Nov 26, 2020 this sequence version replaced NM_053428.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF271786.1, CB586228.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760393,
                                           SAMN11044071 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-152               JAXUCZ010000021.1  142423385-142423536 c
            153-263             JAXUCZ010000021.1  142388735-142388845 c
            264-367             JAXUCZ010000021.1  142382991-142383094 c
            368-566             JAXUCZ010000021.1  142317951-142318149 c
            567-2008            JAXUCZ010000021.1  142312391-142313832 c
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..2008
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /note="fibroblast growth factor 13"
                     /db_xref="GeneID:84488"
                     /db_xref="RGD:620164"
     exon            1..152
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..703
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /note="fibroblast growth factor 1c"
                     /codon_start=1
                     /product="fibroblast growth factor 13"
                     /protein_id="NP_445880.1"
                     /db_xref="GeneID:84488"
                     /db_xref="RGD:620164"
                     /translation="MALLRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDS
                     TYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTY
                     SSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLT
                     EFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST"
     exon            153..263
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /inference="alignment:Splign:2.1.0"
     exon            264..367
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /inference="alignment:Splign:2.1.0"
     exon            368..566
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /inference="alignment:Splign:2.1.0"
     exon            567..2008
                     /gene="Fgf13"
                     /gene_synonym="FGF-13; Fgf1c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgatgctt ctggccagta ccttggagaa tactttagat atgccttaaa ctttctctga
       61 tctctctgtg tctgcttcaa atgtagacag caattgtctg ggtaggacca tcttataaag
      121 aagcatggct ttgttaagga agtcgtattc agagcctcag cttaagggga tagtcaccaa
      181 actctacagc cgacaaggct accacttgca actgcaggca gatggaacca ttgatggcac
      241 caaagacgag gacagcactt acactctgtt taacctcatc cctgtgggtc ttcgagtggt
      301 ggctattcaa ggagttcaaa ccaagctgta tttggcaatg aacagcgagg gatacttgta
      361 cacctcggaa catttcacac ctgagtgcaa attcaaagaa tcagtgtttg aaaattatta
      421 tgtgacatac tcatcaatga tctaccgtca gcagcagtcc ggccgagggt ggtatctggg
      481 tctgaacaaa gaaggagaga tcatgaaagg caaccatgtc aagaagaaca agcctgcagc
      541 acattttctg cccaaaccac tgaaagtggc catgtacaag gagccctctc tgcatgatct
      601 cacggagttc tcccgatccg gaagtgggac cccgaccaag agcagaagcg tctctggtgt
      661 actgaatgga ggcaaatcca tgagccacaa tgaatcaacg tagccagtga gggcaaaacg
      721 agggctctat aacagaacct tacctccagg tgctgttgaa ttcttctaac agtccttcat
      781 ccaaaagttc agacttatca gtgaggttta ccaaacacac aggcagagtt ccctattcta
      841 tctgccatta taccttgtta tcatccgtac taaagcccca taatttagat taagcttgtg
      901 caaaaagaat gccaagcatt atcaatgaac taaacctgga agaaggactg ccaaattttc
      961 tcatgatctc acctatactt tgtgaataga taacagagca aaaatattta acagcacgaa
     1021 tgctggtcaa tttgcttccc aactaagaaa atgtaaaaga ccacagtaat tattaacaaa
     1081 acaaaacaaa acaaaacaac aaagttaact gcttaaatgt tttgtagggg caaacaaatt
     1141 ctgtgaactg tgctgttttc ttggcttcgt gttttctatc tctgcttgat tcaaatgtac
     1201 tctttacttt catatagtgc aactttatgg tttctgaaaa ttaatggttc tattgactct
     1261 atcacttaat ccaaatcaac cgaggtcagg gttgaatctg aattggcatc tgagactcag
     1321 agtaacggcg ttcttaaggt ttttcctctt tctccctctc cttcctactg tccctcttcc
     1381 tctctctcct ttttctgttg tcaattagaa ctgtagcatt ctggtcaagt tcttgtgctg
     1441 tactttgtgc gtagaaattg agttgtatcg tcaaccccag tcagtaagat aagttgaaac
     1501 aagattatcc tcaagtgtag atttctctta attccattcg tgtatcacgt taatctattg
     1561 ttgtggcttc ttgtgtaaag acaggaactg tggaacagtg gcattgtctt tctcgtgttg
     1621 tttaaataag aaatgtctca tctgtacatg taaaagtcct tctgtcattg gatttggcac
     1681 gtgaacattg tgtacaagac aatgttaaga ctggttcccc ctaaacaaca tatattatac
     1741 ttgctactgg aaaagtgttt aagacttagc taggtttcca tttagatctt catatctgtt
     1801 gcatggaaga aagttggaat cttggcatag agttgcatga tatgtaagat ttgtgcatta
     1861 ataattgtta aactctgtgt tccaaaagtg aacatagcat gtacaggcag ttttctgccc
     1921 tgtgcataaa aagttaaaaa aaagttgttt aatatttgtt gttgtatacc caaatacgca
     1981 ccgaataaac tctttatatt cattcaaa
//
