LOCUS       XM_006254651            4149 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibroblast growth factor 1 (Fgf1),
            transcript variant X2, mRNA.
ACCESSION   XM_006254651
VERSION     XM_006254651.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006254651.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006254651.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4149
                     /gene="Fgf1"
                     /gene_synonym="FGF-1; Fgf2b; HBGF-1; HBGF1"
                     /note="fibroblast growth factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 2 long SRA reads, 21 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 53 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:25317"
                     /db_xref="RGD:2605"
     CDS             481..948
                     /gene="Fgf1"
                     /gene_synonym="FGF-1; Fgf2b; HBGF-1; HBGF1"
                     /codon_start=1
                     /product="fibroblast growth factor 1 isoform X1"
                     /protein_id="XP_006254713.1"
                     /db_xref="GeneID:25317"
                     /db_xref="RGD:2605"
                     /translation="MAEGEITTFAALTERFNLPLGNYKKPKLLYCSNGGHFLRILPDG
                     TVDGTRDRSDQHIQLQLSAESAGEVYIKGTETGQYLAMDTEGLLYGSQTPNEECLFLE
                     RLEENHYNTYTSKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD"
ORIGIN      
        1 acatgtttcc atcagggcaa agaggcaaag atatctgcca agtgttggag gtggaaggag
       61 tcagtggctt ccatctccga gctccagaga ctaaggaagc aggcagtcaa gagctggtta
      121 aactgtattc actcactcaa tctacaaata tttgtcaaga gcccgttagg tgccaggcat
      181 cttgccagcc tgtgggatgc catggtgagc aggacagacc agtttctgcc tctgtggagc
      241 tggcagcccg gtcatgaagg gaaatattaa ttaaataatc gcaagcatga aggtgtaatt
      301 gaagacggat gtagggtttc cagacgaata ggaggtggtc ctgtgaggac tggaggagcc
      361 tggctcagtt ctgagaagtc aggaaaggct ttctgaaaga actgttggtt gaactatgat
      421 ctgaagacaa aggagcagtt aaccagtctt gaacgcacca tcgacagttg ctgctgagtc
      481 atggccgaag gggagatcac aacctttgca gccctgaccg agaggttcaa tctgcctcta
      541 gggaactaca aaaaacccaa actgctctac tgcagcaacg ggggccactt cttgaggatt
      601 cttcccgatg gcaccgtgga tgggaccagg gacaggagcg accagcacat tcagctgcag
      661 ctcagtgcgg aaagcgcggg cgaagtgtat ataaagggta cagagactgg ccagtacttg
      721 gccatggaca ccgaagggct tttatacggc tcgcagacac caaatgaaga atgcctattc
      781 ctggaaaggc tagaagaaaa ccattataac acttacacat ccaagaagca cgcggagaag
      841 aactggtttg tgggcctcaa gaagaacggg agttgtaagc gcggtcctcg gactcactac
      901 ggccagaaag ccatcttgtt tctccccctc ccggtatctt ctgactaagg agtctgttct
      961 gggtgctccc tatttttggt tgaccctaaa atgttccctt gaccattggc tgcgctaacc
     1021 ctcagcccac agagcctgaa tttgtaagca gtgcttctaa atagccagtt cacttttccg
     1081 ctgagccctt ccccaccacc ccagcacagt ttggaacacg gggaccaaat tacttctagg
     1141 ggacaactgg ctggccagtc taggtctggg tttggatatc cagatgcttc agggtacctg
     1201 ctacaagttg gacctcgtga tacaaagagg ggagccatgt gtagcatctg gaggggtcta
     1261 agaagtgggt tcttttagta gctgcatgct ctttcccctt ctgagtaatc cctggttttg
     1321 agtaccccca ggcacttagc atgactaccc ttccccctac cagcacctca taaatatcag
     1381 taaagaaact gatagtaagg ctgaaggaat tttatgatgg agacaaaaat caccccaccc
     1441 caccccaccc cacccccatg tacagacagg acttaaaacc aaaatcgagt atggcatttc
     1501 catggtccac ctagaagcct gggacctcag aacagagtaa gaaggcaaag ctcagacaca
     1561 aggagtcggg atgaacccac atcccagcag tcatttccaa gttactgagg aaacagggga
     1621 agaaccccgg aaatggtttc ttagtaatgg caagcacaga gatctggggt ctgaagagtg
     1681 agtataggag caaggagaca ggaaggatgt cttcagctgt ggatgttagc acctaaaaag
     1741 aaagatgtta tactgagggg cggagaggga aaaaaagtga gaccatgtca ccgtgtgctt
     1801 ggccaccaca aaatcagggc tatgggcatc ccagtacaat ggccccaaat tgcacatgca
     1861 ttcatatcct ctgagggttt tgtaggaata tgaagcctga tttggtgggg ctgctgtggg
     1921 ggagttctgt gttttgaaag ggcccccagg tcccatagat tctgctggct tctctgccat
     1981 gctttaagag cagccccaga gaatactctt ctgcctccac cgcctgggtg tccctgaata
     2041 tttacgcagt agtattgtat atgtccatag catggtttca aggcccagtg cctataaaat
     2101 gcccacttag aagtcactga aaccacattt caaaaagtgt taagcctcac cagtagtttt
     2161 tcccaagaga ccgtcaatct cgaagctggc ttcctcctta aagtaaactt tgcccaagcg
     2221 accagcaaat tagaaacgct attcatctct gacataggac acaaacacca tgagaaggcc
     2281 tttcatgcac caattcaata tactgtgaga cttaggtttc tttcacattt tatatagctt
     2341 gaaggcagta aatggattcg cactcagcca cagccaatag cagcatagga tgtcaaagct
     2401 acttagttac ctaacactgc actcactcat gaaacctttc ctctgtgtct gctactgtgc
     2461 tttaagaacg ggtagttcag gctgggagat ggcttagcag taaagagcac acacactgcc
     2521 ctcgtaagga cagttcagtt cccagcaccc acatcatgat gctcagaccc agttccaact
     2581 ccggagacgt gatgccctct tctggcctcc aggggtactg catgcacata tacaagcgta
     2641 cacacttttt aaaaaatata aaccaatgat atggcggatt aaaactgatg acagtgttca
     2701 tctgtttgac aaggatctaa agtaactatt tgctgaaaaa attccttata acaacactgt
     2761 catattttag tggatgacac tcgagaggtc tgagtgctgg tggaggacta aactgagcta
     2821 tttcacagca tggttcatag taacattctt ccagacatgg tgatgcacac ctttaatccc
     2881 agaactcagg aggcaaagca agtggatctc tgtaagactg ggcccaacct ggtctacaca
     2941 gtgagttcct gggcagtctg gggtatatag aagccctgta tatttttttt aaaagcttat
     3001 aataattttt gcttttttac aagataagtc atgacttctt aaagtctata gtttaaataa
     3061 tatggttctg ttttgtttta gtaaatcata ggcacactgg agataataca gtatggtttc
     3121 ccacctcttt atatgaagat ttggccagga aaaacataca gagatgaaat ctatgatatt
     3181 tagaatagtg tcagcaaatg aaccaaacac aagtgtaaca tcaccaagac attaaaaacc
     3241 actgcacaag gatgaaatgg cgtctgagac ctcagagact caaagcacgg atactgcaca
     3301 ttgtaacctt aaccaccaac ctcgtcatga tccgtgcatt tgctcgacat atactgcaga
     3361 cccagtgtgt gtcaggcact ggatgtggac cccggggaca atgtctgtca ggcgtcctct
     3421 ccctgggcac atacttgtca agagagacgc tgtggattca tttctttcag tcaagtcaaa
     3481 acgtggactg aaactactga atcaagagta tgttctagat tcccccaaca gccaataaca
     3541 cccactccac ccccaacaaa gtgatagaga agctttgaga agcaacccag gacttccaat
     3601 gctagtgctc tcagaggagt ggactaattt caaatcgggg ggtcaggggg agaaaagctg
     3661 tcagatcctt cagaaaggga gccgagaccc tgtccctgcg ctgttgggaa cattgatcat
     3721 aggaacattc ggttgcgtac tctcctccat aactaagtcc caaggccatc cgcttgtcac
     3781 gtgtctcccg catgattcta aactgactgc aacgtggtgt ccaacactcc ctaccaactg
     3841 tgaggaacat gtgggctttt gacagttagt gacacactag agatggagct gggtgttgcc
     3901 cctgacggcc agtgtccata caaaaatcta accagtccag cagctgccat tgatgatgag
     3961 gcccctgctt tgcattgaag gaaatggagc ccaagtcctc cgctctgcag aggacactgc
     4021 ctaaagcgat cacggtccct ggctgcaaag caggctctgg tggagatgac gcctgacgtt
     4081 ccctctgcgc ccacactgta ttacactctg aaccttacca atattaataa atgttgtatt
     4141 agtgggtga
//
