LOCUS       NM_001109224            2409 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus Fez family zinc finger 1 (Fezf1), mRNA.
ACCESSION   NM_001109224 XM_001061116 XM_575404
VERSION     NM_001109224.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Janssens DH, Hamm DC, Anhezini L, Xiao Q, Siller KH, Siegrist SE,
            Harrison MM and Lee CY.
  TITLE     An Hdac1/Rpd3-Poised Circuit Balances Continual Self-Renewal and
            Rapid Restriction of Developmental Potential during Asymmetric Stem
            Cell Division
  JOURNAL   Dev Cell 40 (4), 367-380 (2017)
   PUBMED   28245922
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Shimizu T, Nakazawa M, Kani S, Bae YK, Shimizu T, Kageyama R and
            Hibi M.
  TITLE     Zinc finger genes Fezf1 and Fezf2 control neuronal differentiation
            by repressing Hes5 expression in the forebrain
  JOURNAL   Development 137 (11), 1875-1885 (2010)
   PUBMED   20431123
REFERENCE   3  (bases 1 to 2409)
  AUTHORS   Weng M, Golden KL and Lee CY.
  TITLE     dFezf/Earmuff maintains the restricted developmental potential of
            intermediate neural progenitors in Drosophila
  JOURNAL   Dev Cell 18 (1), 126-135 (2010)
   PUBMED   20152183
REFERENCE   4  (bases 1 to 2409)
  AUTHORS   Hirata T, Nakazawa M, Muraoka O, Nakayama R, Suda Y and Hibi M.
  TITLE     Zinc-finger genes Fez and Fez-like function in the establishment of
            diencephalon subdivisions
  JOURNAL   Development 133 (20), 3993-4004 (2006)
   PUBMED   16971467
REFERENCE   5  (bases 1 to 2409)
  AUTHORS   Hirata T, Nakazawa M, Yoshihara S, Miyachi H, Kitamura K, Yoshihara
            Y and Hibi M.
  TITLE     Zinc-finger gene Fez in the olfactory sensory neurons regulates
            development of the olfactory bulb non-cell-autonomously
  JOURNAL   Development 133 (8), 1433-1443 (2006)
   PUBMED   16540508
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_575404.1, XM_001061116.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN06621351, SAMN12840106
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..2409
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /note="Fez family zinc finger 1"
                     /db_xref="GeneID:500048"
                     /db_xref="RGD:1560480"
     exon            1..1089
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1716
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /note="zinc finger protein 312B"
                     /codon_start=1
                     /product="fez family zinc finger protein 1"
                     /protein_id="NP_001102694.1"
                     /db_xref="GeneID:500048"
                     /db_xref="RGD:1560480"
                     /translation="MDSSCLNATTKMLATAPARGNVMSTSKPLAFSIERIMARTPEPK
                     ALPVPHFLQGAVPKGDPKHSLHLNSSIPCMIPFVPVAYDTNSKAGVNGSEPRKASLEV
                     PAPPAVAPSAPAFSCSDLLNCALSLKGDLARDALPLQQYKLVRPRVVNHSSFHAMGAL
                     CYLNRGDGPCHPAAGVNIHPVASYFLSSPLHPQPKTYLAERNKLVVPAVEKLPSGVAF
                     KDLSQAQLHNYMKESAQLLSEKIAFKTSDFSRGSPNAKPKVFTCEVCGKVFNAHYNLT
                     RHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTH
                     TRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQFKCNICNKAFHQVYNLTFHMH
                     THNDKKPFTCPTCGKGFCRNFDLKKHVRKLHDSSLGLTRTPTGEPGSDPPPQLQQPPP
                     APLPPLQPTLPPPGPLQSGLHQGHQ"
     exon            1090..1224
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1357
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /inference="alignment:Splign:2.1.0"
     exon            1358..2409
                     /gene="Fezf1"
                     /gene_synonym="RGD1560480"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagttaac gattggcgag atcttggctg cgttattgac acaacacttt ctattgatag
       61 aaataagtag tgattgtccc cgagtcattg gtgcgccaag aactctgcga tgggctggca
      121 ggagtccatt gggctgggca ggcaggttcg gctggtgatg ctggggagga ggaggaggag
      181 gctgctggtg gtgacggtgc ctgtcctctc cgcaggtctg tgacaagcag gggacaaggc
      241 aacgatcgtg cgactcaacc ccggcggacc gacgctggcg actcagtcat ggacagtagc
      301 tgcctcaacg cgaccaccaa aatgctagcg actgctccag ctcggggcaa cgtgatgagc
      361 acatccaaac ccttggcttt ctccatcgaa cgaatcatgg cgcgcacccc tgagcctaag
      421 gccctgccgg tcccccactt cctgcaggga gccgtgccca aaggggaccc caagcactct
      481 ctgcatctca actcgtcgat cccctgcatg atccctttcg ttcccgtggc gtacgacacg
      541 aactccaaag caggagtgaa tggctcagag ccccgcaaag cgagtttgga ggttccggcg
      601 ccgcccgcgg tggcgccctc cgcgcccgcg ttcagctgca gcgacctgct caactgcgct
      661 ctaagtctca agggcgacct ggcccgcgac gcgctgccac tacagcagta caagctggta
      721 aggccgcgtg tggtgaacca ctcttcgttc cacgccatgg gcgccctgtg ctacctgaac
      781 cgaggtgacg gcccgtgcca cccggctgcg ggcgtgaaca tccaccccgt ggcctcctac
      841 tttctcagtt cccctttgca cccacagccc aaaacatatt tagccgaaag gaataaactg
      901 gtcgtcccgg cggtggagaa gctaccttcg ggagtagctt tcaaagacct gtcccaggct
      961 cagctacaca attacatgaa agaaagcgcc caacttttgt cggaaaaaat cgctttcaaa
     1021 acctcggatt tcagccgcgg ctctcctaac gccaaaccca aagttttcac ttgcgaagtc
     1081 tgcggaaagg tctttaatgc gcactataac ttaacccgtc acatgccggt gcacacagga
     1141 gccagaccct tcgtgtgcaa agtgtgtggg aaaggtttcc ggcaagccag caccctttgc
     1201 cggcataaga tcattcacac acaggaaaaa ccccacaaat gcaaccagtg cgggaaagcg
     1261 tttaatagaa gttccacgtt aaacacacac acccgaattc acgcgggcta caaaccattc
     1321 gtgtgtgaat tctgtggcaa aggatttcat caaaaaggga attacaaaaa tcacaagctg
     1381 acccacagcg gggagaagca gttcaagtgc aatatctgca acaaggcttt ccaccaggtg
     1441 tacaacctca ccttccacat gcacactcac aacgacaaga agcctttcac ttgccccacg
     1501 tgtggcaagg gcttctgtag gaactttgac ctcaagaagc atgtccgcaa gctacacgac
     1561 agcagcctgg ggctgacccg cactcctact ggggagccag gcagcgatcc gccgccccag
     1621 ctgcaacagc cgccgcccgc gcctctgccg ccgctgcaac ctaccttgcc gcctcccggg
     1681 cctctgcaat ccgggcttca ccaaggccac cagtgacgga ggctaaagat ctccctaacc
     1741 ccaaccggag ggccctcact gcggaagtcc gcagactaga gcggacctct tggtccaagc
     1801 tcgcctacaa aacccggggc accgggcgca aaagggcccc gcactttcgg gaggacccca
     1861 tgcctctaca tcccttggcc tttcgcctct tgcatgcacc tgctaaatgg ttttgtgtat
     1921 tatattctat ataggcacta acaattacga tatatttgga gggacttatt tcaatttttt
     1981 tttgagttga gaagactttt catctcgggt ggagagatgg tgtttgtttt gttttgtttt
     2041 taaacgaata tctgctgtat ttattgagat ctgtattatt ctacccggga atgctgcatc
     2101 attttaattt tattattgta tatatttcca ttgtgtcgat tctgccatct caaaatgcct
     2161 gctgaccgtt tataattttc tccttccccg aagcaacaaa acgcggtgtg tatgttctat
     2221 atacacacag aggtgtgtac ttgtgaggat gcgttcacca tttgtgagcc catacataac
     2281 acacacacat acatattaga taagagtggc tcattacgaa tgaatttcaa attttgcttt
     2341 tgatccttgc acgtcggagt tgattcattg actgttggaa ataaaaactt ggaacatgct
     2401 tatttaatc
//
