LOCUS       XM_039080186            7708 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fer-1-like family member 6 (Fer1l6),
            mRNA.
ACCESSION   XM_039080186
VERSION     XM_039080186.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080186.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7708
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7708
                     /gene="Fer1l6"
                     /note="fer-1-like family member 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:314997"
                     /db_xref="RGD:1564703"
     CDS             4..5595
                     /gene="Fer1l6"
                     /codon_start=1
                     /product="fer-1-like protein 6"
                     /protein_id="XP_038936114.1"
                     /db_xref="GeneID:314997"
                     /db_xref="RGD:1564703"
                     /translation="MFGLKLKKKKKDKTEKGLVLTNKGAQDGSESEVPQEGPSHQEGP
                     EDLTYDDASITPGPSAPSKRRAKLLTKIHDGEVKSQNYQITITITEARQLVGENIDPV
                     VTIEIGDEKKQSTVKEGTNSPFYNEYFVFDFIGPQVHLFDKIIKISVLHHKLIGSILI
                     GSFRVDVGTVYNQPGHQFCDKWALLTDPGDIRTGTKGYLKCDISVTGKGDILKTNPKT
                     SDAEEQIEKNLLIPQGFPSERPWARFYVRLYRAEGLPKMNSSIMANVTKAFVGDSKDL
                     VDPFVEVSFAGQTGRTSVQKNCADPVWHEQVVFKEMFPPLCRRVKIQLWDEGSMNDVT
                     LATHFIDLKKISNEQDGDKGFLPTFGPAWINLYGSPRNHSLMDDYQELNEGFGEGVSF
                     RGRILVEIAVEILSGGAQESKFSKALKELKLSSKDKDSKSSKGSSKDKADKADDGKAQ
                     QATDKTNSTEVEVESFAVPPEIIPEKYEDFLLFGAFFEATMIDRKIGDKPISFEVSVG
                     NFGNLIDGGSHHGSKKKSAELMEEDVLPLLHEGEKDVAHDTAISMASTTHPEKPLVTD
                     GNRNYNYLPFGAKKPCVSFISSWGDQIFRLHWSNMLEKMADLLEEGIEEVRELVKVSE
                     EAPEEKMKTVLHDFISQSRAFISEAEKKQKTPNQTALDKKRLTLCWQELKAMTDEAEG
                     VIQQQKKKLSLDEMIREAQNFVEKIRFLVDEPQHTIPDVFIWMLSNNKRVAYARIAAK
                     DLLYSPIEEQMGKHCGKIKTHFLKLPGKRPAGWTVQAKVDIYLWLGSTRYSDAVLDNL
                     PAGYEAEMPSKSSGTHHPPSALLYQAQHVFQLRAHMYQARGLIAADSNGLSDPFAKVT
                     FLSQCQTTKVISQTLSPTWNQMLLFNELVLHGEERELMESPPLVVVELYDSDAVGKPE
                     YLGATVAAPVVTLADQDYEPPKLCYHPIFCGNLSGGDLLAVFELLQVPSSGLQGLPPT
                     GPPDITQIYPVPSNIRPVLSKYRVEVLFWGVREMKKVQLLSVDRPQVLIECGGRGVKS
                     CVIQSYKNNPNFSVQAEAFEVELPENELLHPPLSICVVDWRAFGRSTLVGTYTINCLK
                     QFLCKSREPLALTSQTDGAGARPAISDSPAAVQSSELLSSSKDLPTDHVYVDIEPPPT
                     EVPDSAQAQTATLVDMPDSSPMLEPEHKPVAQGLPKDGHIKQDPRMPSRRSTKRRRRT
                     IADESAENVIDWWSKYYASVKKAQKEKENNHKEKRDPKAKPGEVVLDVDDGPKKKKDK
                     MFKKKLKDDGNEAIPNLAVLKIYDGDLESEFNNFEDWVKTFELFRGKSTEDDHSLDGD
                     RVIGKFKGSFCIYKSPEDSASEDSGQLRIQQGIPPNHPIQVLIRVYIVAAFNLSPADP
                     DGKSDPYIVLRLGQTEIKDRDKYIPKQLNPVFGRSFEIQATFPKESLLSVLIYDHDMI
                     GSDDLIGETKIDLENRFYSKHRAICGLQSQYEIEGYNAWRDTAKPTEILTKLCKDNML
                     DGPHFRPGKIQIGKKVFSGKTVFTEADSEEMVESYEHLALKVLHSWEDIPEVGCRLVP
                     EHIETRPLYHKDKPGMEQGRLQMWVDIFPKDTPQLGPPVDISPRKPKGYELRVTIWNT
                     EDVILEDENIFTGQKSSDIYVKGWIKGLEDDRQETDVHYNSLTGEGNFNWRFLFPFQY
                     LPAEKQMVISKRENIFSLEKMECKTPAVLVLQVWDFERLSSDDFLGSLEMNLNSFPRA
                     AKSAKACDLSKFENASEENKISIFQQKRVRGWWPFAKSKELTGKVEAEFHLVTAEEAE
                     KNPVGKARKEPEPLAKPNRPDTSFSWFVSPFKCLYHLIWKNYKKYIIIAFILIILIVF
                     LVLFIYTLPGAISRRIVVGGS"
ORIGIN      
        1 ggaatgtttg ggctgaagct gaaaaagaag aagaaagata aaacagagaa gggattggtc
       61 ctcaccaaca agggtgcaca agatggtagt gagtctgaag taccacagga agggccttct
      121 caccaggaag gaccagaaga cttgacttat gatgacgctt ctatcacacc tggcccctca
      181 gctccttcca agagaagagc aaagctgctg actaagatcc atgatgggga ggtcaaatct
      241 caaaactatc agatcaccat caccatcact gaggcccgac agctggtggg cgagaacatt
      301 gacccagttg tgaccattga gattggggat gagaagaagc aaagcacagt gaaggaaggg
      361 accaacagcc cattttataa tgagtacttt gtctttgatt tcatcggacc ccaagtacat
      421 ctttttgaca agatcatcaa aatctcagtc ttacatcaca agctgatagg aagcatcctg
      481 attggctctt tcagagtgga tgtggggacg gtgtacaacc aacctggtca tcagttctgt
      541 gacaagtggg cactgcttac agacccgggt gacatcagga ctggcaccaa gggctacctg
      601 aagtgtgaca tcagcgtgac cgggaaaggc gacatcttaa agaccaaccc caaaacctcc
      661 gatgctgagg agcaaataga gaagaacctt ttgatccctc aaggatttcc atcagagaga
      721 ccttgggcca ggttctatgt gagactttac cgagcagaag ggttacccaa aatgaactcc
      781 agcattatgg caaatgtcac caaagcattt gtgggtgaca gtaaggacct tgtggacccc
      841 ttcgtggagg tgtcctttgc tgggcaaacg gggcgaacct ctgtgcaaaa gaattgtgct
      901 gatcctgtgt ggcacgagca ggtggtcttc aaggaaatgt tccccccctt gtgccggagg
      961 gtgaaaattc agctgtggga tgaaggcagc atgaatgatg tgaccctggc aacccacttc
     1021 attgacctga agaaaatctc caatgagcag gacggcgata aaggttttct tcctactttt
     1081 ggacctgcct ggattaacct gtatggctct cccaggaacc acagcctcat ggatgactac
     1141 caggagttga atgaaggctt tggggaaggt gtgtccttca ggggccgaat cttggtggaa
     1201 attgctgtgg agatcctctc aggtggggcc caggagtcta agttctccaa ggctctgaag
     1261 gagctgaagc tgtcttccaa agacaaagac tccaaatctt ccaaaggctc cagtaaggac
     1321 aaggccgaca aagctgatga tggcaaagcc cagcaggcca ctgacaaaac caactccacg
     1381 gaggtggagg tggaatcttt tgctgttccc ccagagatta taccggaaaa atatgaggac
     1441 tttttactct ttggggcctt ttttgaagct actatgattg acaggaagat tggagacaaa
     1501 cctatcagct ttgaagtttc tgttggtaac tttgggaacc tgattgatgg agggtctcat
     1561 catgggagca agaagaaatc ggctgagctg atggaagaag acgtccttcc tctgctccac
     1621 gaaggagaaa aagatgtggc ccatgacact gccatttcta tggcctccac cactcaccca
     1681 gagaaacctc ttgtgacaga cggaaacaga aattacaact atttgccttt tggtgccaag
     1741 aagccctgtg tctccttcat cagttcctgg ggagaccaga tattcagact gcactggtcc
     1801 aatatgctgg aaaaaatggc tgacctcttg gaagaaggca tagaagaagt gagggagctg
     1861 gtcaaggttt ctgaggaggc accagaagag aaaatgaaga ctgtgctcca tgacttcatc
     1921 agtcaaagca gagcttttat ctctgaagca gaaaagaagc agaagacgcc gaaccaaact
     1981 gctctagata agaaacgact cacgctctgt tggcaagagc tgaaggcaat gactgatgag
     2041 gctgaaggag tcattcaaca acagaagaaa aagttatctc ttgatgagat gatccgtgaa
     2101 gctcagaact tcgtggagaa aatccgcttt cttgtggatg agcctcagca cactatcccg
     2161 gacgtcttca tttggatgct cagtaacaac aagagagtgg cgtacgcccg gatcgctgcc
     2221 aaagacctgc tttactcccc catcgaagag cagatgggca agcactgtgg gaagatcaaa
     2281 acccactttc tcaagcttcc tgggaaacgg ccggctggct ggactgtaca ggcaaaagtt
     2341 gacatatatc tgtggctggg ctccactaga tactccgatg ccgttttgga caacttgcca
     2401 gcaggctatg aagcagaaat gccttccaaa tcatcaggca cccatcaccc accatcagcc
     2461 ctgctatacc aagcccagca tgtctttcag ctgagagcac acatgtacca agcccggggc
     2521 ctcatcgcag ctgacagcaa tggactttca gatccctttg ccaaagtcac attcctatcc
     2581 cagtgccaga ccacaaaggt catttcccag actctctctc ctacctggaa ccagatgctg
     2641 ctattcaatg agttggttct gcatggcgaa gagagggagc taatggagtc cccacccctt
     2701 gtggtggtgg aactctacga cagtgatgcg gtgggaaagc cagaatattt gggtgccacg
     2761 gtggctgctc cagttgtgac cctggctgac caggactatg agccccccaa gctgtgctat
     2821 caccccatct tctgtggaaa cctctctgga ggggacctcc ttgctgtgtt tgagctgttg
     2881 caggtccctt cttctgggct gcagggcctc cctcccactg gcccacctga catcacacag
     2941 atctatcctg ttccctccaa catccggcca gtgctgagta aataccgagt cgaggtcctt
     3001 ttctggggtg tccgagaaat gaagaaggta cagctcctct ctgtggatcg accacaggtt
     3061 ctcattgagt gtggaggacg aggtgtgaag tcttgcgtga tccaaagtta taagaacaac
     3121 cccaacttca gcgtgcaggc agaggccttt gaagtggagc tgcctgagaa tgagctactg
     3181 cacccaccac tgagcatctg tgtggtagac tggagggctt ttgggaggag caccctcgtg
     3241 ggcacctaca ccatcaactg cttgaagcag tttctgtgta aatcgagaga gccccttgcc
     3301 ttgacttcac agacggatgg agctggggcc agaccagcca tttcagattc accagcagca
     3361 gtccagtctt ctgaactcct cagctcctcc aaggacctcc caacagatca cgtctatgtg
     3421 gatattgagc cacctcccac agaggtacct gactctgctc aggcccagac ggccaccctg
     3481 gtggacatgc cagactcctc tcctatgctg gaacctgaac acaaacctgt agcacaggga
     3541 ctaccaaaag atggacacat caagcaagat cccaggatgc cttcccggag atccaccaaa
     3601 agaagaagaa ggactatagc agatgaatct gctgaaaatg tcattgactg gtggtctaag
     3661 tattacgcct ctgtaaagaa agcacagaag gaaaaggaga acaaccacaa ggagaaaagg
     3721 gacccaaagg caaagcctgg cgaggtagtg ttggatgtgg atgacggtcc caaaaagaag
     3781 aaagacaaaa tgttcaagaa gaaactgaaa gatgacggaa atgaggccat cccaaacctg
     3841 gctgtactga agatttacga tggtgatctt gaaagtgaat tcaacaattt tgaagactgg
     3901 gtgaagacct ttgaactctt cagaggcaaa tcaacagaag atgatcacag tctggacgga
     3961 gaccgggtca taggaaagtt caagggctct ttctgcatct acaaaagccc agaggattct
     4021 gcctcagagg acagtggcca gctgagaatc cagcaaggaa ttccacccaa tcatcccatt
     4081 caagtactga tccgtgtgta cattgttgcg gcatttaatc ttagcccagc tgatccagat
     4141 ggcaaatcag acccctacat tgtgctcagg cttggccaaa cagaaatcaa agaccgggac
     4201 aaatacatcc ccaaacaact gaatccagtg tttggaaggt catttgagat ccaggccact
     4261 ttcccaaagg agtccctgct ctccgtcctc atttatgacc atgacatgat cgggtcagat
     4321 gacctcattg gggagaccaa gattgacctg gagaaccgtt tctacagcaa acacagagcc
     4381 atctgtggct tgcagagcca gtatgagata gaagggtaca atgcctggag ggacacggcc
     4441 aaacccacgg aaatcctaac caagctctgc aaagacaaca tgctggacgg accacacttt
     4501 cgccccggga agatacagat tggaaagaag gtcttctctg ggaaaacggt cttcactgaa
     4561 gccgactctg aggaaatggt ggagtcttat gaacacttgg ccctcaaggt gttacactct
     4621 tgggaggaca ttcctgaggt cgggtgtagg ctggttcctg agcacataga aacaaggcca
     4681 ctgtaccaca aggataagcc aggaatggag cagggccgtc tacagatgtg ggtggatata
     4741 tttccgaaag atacacctca gcttggacct cctgttgaca tttcaccaag gaaacccaaa
     4801 ggatacgagc tgagggtgac catctggaac actgaagatg ttattttaga agatgaaaat
     4861 atcttcacgg gtcaaaaatc aagcgatatt tatgtcaaag ggtggatcaa gggtttggag
     4921 gatgacaggc aggagacaga cgtgcattac aactccctga ctggagaagg caacttcaac
     4981 tggcgcttcc tgtttccgtt ccagtatctg ccagccgaga agcaaatggt catcagcaaa
     5041 cgggagaaca tcttttccct ggagaagatg gaatgtaaga ctccggctgt gctggtgctg
     5101 caggtctggg attttgaaag gctgtcctca gacgacttcc tgggctccct ggaaatgaac
     5161 cttaacagct tcccccgggc ggccaagtct gcgaaagcct gcgacctgtc caagtttgaa
     5221 aatgcaagcg aagagaacaa aatctccata ttccagcaaa agcgcgtgcg tggctggtgg
     5281 ccttttgcaa agagcaaaga gctcacgggc aaggttgaag ctgaattcca cctggtcaca
     5341 gcagaagaag ctgagaaaaa ccctgttggg aaagcccgaa aggagcctga gcccttggcc
     5401 aagcccaacc gcccagacac ctcattctca tggtttgtga gccccttcaa gtgcctgtac
     5461 cacctcatct ggaagaacta caagaagtac atcatcatcg ccttcatcct catcatcctc
     5521 atcgtcttcc tggtcctctt catctacacc ctgccaggcg ccatcagccg gaggatcgtt
     5581 gtgggtggct cgtaggggca gtggaggaca cagatctctt ttcccaaatg ctctcctctg
     5641 ttctgtacag gaatctctac aatcatgtgc agcgagaggt actgtgctga gtgctaaggg
     5701 gatagtcatg ggaccaatag ccttccctgt atcttgagac aaatcaggag gacaggactc
     5761 tggcagtctt tctctgcccc agtacctgct accacccttc aaacccctaa atcccaaatc
     5821 ttattttttg cccacaagta acctgaatga ctctttcact tcaggctaat gaccagtgac
     5881 ctcaaattga cctcagtgag ccttttcatc atgtaatagg ttctatttaa aaaagattaa
     5941 actctggttc tgagagttta ttagaagcac tgcattttga ataaaatgtc ttagtaagta
     6001 gactgaaagt attcagtaaa ttactatcca tttaatatgt ccccaaaatc tcttggttta
     6061 gccttcagga ttataggaca cagtcacttt caggctgtca aattgggtta gcaaaaatgt
     6121 gcataactca tctaaaatac tttgttgttg aaattctgct atagcagcgg ttctcaaagg
     6181 tgtgggttgg gaccccttgg gcaaacctct atttcccaaa atatttatat tacaactcta
     6241 taacagtagc aaaattacag ttatgaagtg gcactgaagt aattttatgg ttgagggtcc
     6301 ccacaacatg aggaattgta ttaaagggtc acagcgttag gaaggttgag acccactgcc
     6361 catagagaca aaatacagcc acgttacctt caaagtcaac catacatgtg tcatggaagt
     6421 ttccaaatgg agggtcgtga tttgtcctaa gacatatgaa ctgtaattat gtgtgtgtgg
     6481 gaagtcagag caggttccct gtcacccagt gggacttctc atttgctaga tccacagcct
     6541 cccaccaagt gtcatgtccc cactggtcac acgactgtga tacgaatgac cactgctgcc
     6601 tctgctcatc ccttacccga ccagcaggtg agcctggctc tagtgtgagt ctcaagtaca
     6661 gaagtaaaaa ccagtctgag aagcaacagc gtattcacct gatggatggc gggcatcagt
     6721 gcctggaagg gagacctctg ggctgtgcag ctcagccctt atattctgtc ctgtctatgg
     6781 tgggggttga actgggggcc tctttcctca gacacagtaa ggaaatcaaa gaattgggat
     6841 gtttggcccc ataaaccttt cttctgtcat aaaggtcatt taggatgcta gtggagaaac
     6901 tactaagttg ggttcatttc ttgctactag aagcatcaag actatgactt ttattttccc
     6961 tggtcttttt ttttttttaa gatggggtct ggtatagtcc gcatagatct taaactgtct
     7021 atatagtcaa gaataactgt gattcctgat cctctctgcc ttgctccatg cttggcttca
     7081 tattgcacag ctgtaacttt tctagaggca aaagtgctca catctacata gaaaatcatt
     7141 ctagaatgtt cctggtccat caaaaactgg aaatacaaac ttgtagtact ggtattcaaa
     7201 cctagagcct ggtacatgtt gggcaagcat tctgccattg atttgcagcc gctgtaactt
     7261 tagtcttaag cagttcaggc agctctggct ctggcaacta taccatccca tcttcctgag
     7321 gtgctgagga atagaagctt gctacctggg cagtgttccc tagggagagc agctacagga
     7381 gtggtctcat cctcactgtg cagtacacca tccatcctta acgaggaggt cagaatgctc
     7441 gacatcacat ggcatgtgta ctaaattcgt tataggcatt tgtatatgta ttagaaaact
     7501 atgtacagca tactgtaaaa ataaatatgt acacaatgat ggaaaaaatg tctagagaaa
     7561 tataccaacg tgaacaatga ttatctaagc agtataattt ttcctttgcc ttcttatttt
     7621 tctatttttc caaaacctcc ttaataagta tatgataatt taatgtaaaa aattaataaa
     7681 cataaactta cctctgttca cttaaaaa
//
