LOCUS       NM_001402064            1553 bp    mRNA    linear   ROD 16-AUG-2024
DEFINITION  Rattus norvegicus Fc receptor-like 1 (Fcrl1), mRNA.
ACCESSION   NM_001402064 XM_006232673
VERSION     NM_001402064.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Polson,A.G., Zheng,B., Elkins,K., Chang,W., Du,C., Dowd,P., Yen,L.,
            Tan,C., Hongo,J.A., Koeppen,H. and Ebens,A.
  TITLE     Expression pattern of the human FcRH/IRTA receptors in normal
            tissue and in B-chronic lymphocytic leukemia
  JOURNAL   Int Immunol 18 (9), 1363-1373 (2006)
   PUBMED   16849395
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Leu,C.M., Davis,R.S., Gartland,L.A., Fine,W.D. and Cooper,M.D.
  TITLE     FcRH1: an activation coreceptor on human B cells
  JOURNAL   Blood 105 (3), 1121-1126 (2005)
   PUBMED   15479727
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Mar 5, 2022 this sequence version replaced XM_006232673.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ232638.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680413
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-80                JAXUCZ010000002.1  175107352-175107431
            81-101              JAXUCZ010000002.1  175116295-175116315
            102-389             JAXUCZ010000002.1  175119075-175119362
            390-668             JAXUCZ010000002.1  175119532-175119810
            669-797             JAXUCZ010000002.1  175120117-175120245
            798-822             JAXUCZ010000002.1  175121170-175121194
            823-905             JAXUCZ010000002.1  175125266-175125348
            906-977             JAXUCZ010000002.1  175125522-175125593
            978-1009            JAXUCZ010000002.1  175126133-175126164
            1010-1553           JAXUCZ010000002.1  175127123-175127666
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1553
                     /gene="Fcrl1"
                     /note="Fc receptor-like 1"
                     /db_xref="GeneID:680665"
                     /db_xref="RGD:1589411"
     exon            1..80
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..1078
                     /gene="Fcrl1"
                     /note="Fc receptor-like protein 1; rCG62545-like"
                     /codon_start=1
                     /product="Fc receptor-like protein 1 precursor"
                     /protein_id="NP_001388993.1"
                     /db_xref="GeneID:680665"
                     /db_xref="RGD:1589411"
                     /translation="MLPWFLLLICALPCEPAGNPVSDVSLKTKPPGEWVMEGNKLVLI
                     CSVANTTENITYLWYRGALGLNLEKKTLPSITAEFEISEVKQSDVDQYYCAADNGHGP
                     VLSELVNINVRVPVSRPVLTFVDTGTQAVLGDLVELHCKALRGSPPIFYQFYHENIIL
                     GNSSDHSGGGASFNFSLTAEHSGNFSCEASNGQGVQRSEVVALNLTGLSLVPTVNGIG
                     NLSSGLTGWLIGCLGPIATVLIFCYWLKRKIGRQSDDPLRSPPQTVLQESNYHNSPDP
                     GHPEPVYENVNAVSGDEVYSLVYHTQQELGPTAAQHVSTHGASELSSGIYSKPRINIV
                     YVDYEDTM"
     exon            81..101
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            102..389
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            390..668
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            669..797
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            798..822
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            823..905
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            906..977
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            978..1009
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1553
                     /gene="Fcrl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttcttttggt gagcggcacc ttcaagttac catccccagc ctagtcctca tgctaccttg
       61 gttcctgctg ttgatctgtg ctctaccctg tgagcctgct ggaaaccctg tctctgatgt
      121 gagcttgaag accaagcccc cgggggaatg ggttatggag ggaaacaagc tggtcctcat
      181 ctgctccgtt gctaacacca ctgaaaatat aacttacctc tggtacagag gggccctggg
      241 tttaaatctg gaaaagaaga cactgccttc aataacagca gagtttgaga tcagtgaagt
      301 gaagcaaagc gatgttgatc aatattactg tgcagctgac aacggccatg gccctgttct
      361 cagtgagctg gtgaacatca atgtcagagt tccagtgtct cgccctgtcc ttacatttgt
      421 ggacactgga acccaggctg tgctggggga cctggtggag cttcactgta aggccttgag
      481 aggctcaccc ccaatcttct accagtttta tcatgagaac atcattctgg ggaacagttc
      541 agaccactct ggaggaggag catccttcaa cttctccctg accgcagaac attctggaaa
      601 cttctcctgt gaagccagca atggccaggg tgtccaacga agtgaagtgg tggctctcaa
      661 cttaacaggt ctctccttag tgcccactgt gaatggaatc ggcaacctct cctcaggact
      721 cactggctgg ctgattggct gtcttggccc catcgccacg gtcctaatat tttgctactg
      781 gctcaagaga aaaataggaa gacaatcgga tgatccactc aggagccctc ctcagactgt
      841 gctccaagaa tccaactacc acaactcccc ggacccaggg catccagaac ccgtgtatga
      901 gaatgtgaat gctgtaagtg gcgatgaagt ttactctctg gtgtaccaca cccagcagga
      961 gctaggaccg acagccgctc agcatgtgag cacacacggg gcaagtgagc tctcctccgg
     1021 aatctattct aagccgagga taaacatcgt ttatgtggac tatgaagaca ccatgtagaa
     1081 ttatgtaaac agcaatgagg agtgctacaa acaagcccaa ggtctgatgt ggcctccgag
     1141 gacactggag acaggagtag cttgcaaaga cacctttccc acgtgctgct gttcattaga
     1201 cgggtccttc acctacccag tgtcaagcca gaacaagtcc tacagaaacc acccaggaaa
     1261 accaacttag atggagaagc tggagcattt gctggtgaca tctggttgtt gtccattcat
     1321 gttggggcat gatgaattac acacaaactt ttatttataa gaagaaaacg gtgtgatgaa
     1381 agcaagtgaa gtcttggagc aggggacaac tgaaactcag agagcacaaa accaatggct
     1441 ttgccggtct gctgtggaga gagctatgct ttctctgtgc acacatccta aaatacccaa
     1501 cagtgtactt ttgagtgtca tcaatttgga attaaaacac aattgcataa aaa
//
