LOCUS       NM_001191632            3051 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus FCH and mu domain containing endocytic adaptor 2
            (Fcho2), mRNA.
ACCESSION   NM_001191632 XM_219503
VERSION     NM_001191632.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Umasankar,P.K., Sanker,S., Thieman,J.R., Chakraborty,S.,
            Wendland,B., Tsang,M. and Traub,L.M.
  TITLE     Distinct and separable activities of the endocytic clathrin-coat
            components Fcho1/2 and AP-2 in developmental patterning
  JOURNAL   Nat Cell Biol 14 (5), 488-501 (2012)
   PUBMED   22484487
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Uezu,A., Umeda,K., Tsujita,K., Suetsugu,S., Takenawa,T. and
            Nakanishi,H.
  TITLE     Characterization of the EFC/F-BAR domain protein, FCHO2
  JOURNAL   Genes Cells 16 (8), 868-878 (2011)
   PUBMED   21762413
REFERENCE   3  (bases 1 to 3051)
  AUTHORS   Henne,W.M., Boucrot,E., Meinecke,M., Evergren,E., Vallis,Y.,
            Mittal,R. and McMahon,H.T.
  TITLE     FCHo proteins are nucleators of clathrin-mediated endocytosis
  JOURNAL   Science 328 (5983), 1281-1284 (2010)
   PUBMED   20448150
REFERENCE   4  (bases 1 to 3051)
  AUTHORS   Henne,W.M., Kent,H.M., Ford,M.G., Hegde,B.G., Daumke,O.,
            Butler,P.J., Mittal,R., Langen,R., Evans,P.R. and McMahon,H.T.
  TITLE     Structure and analysis of FCHo2 F-BAR domain: a dimerizing and
            membrane recruitment module that effects membrane curvature
  JOURNAL   Structure 15 (7), 839-852 (2007)
   PUBMED   17540576
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_219503.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN12840111, SAMN12840115
                              [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-183               JAXUCZ010000002.1  31915263-31915445   c
            184-275             JAXUCZ010000002.1  31906540-31906631   c
            276-350             JAXUCZ010000002.1  31899684-31899758   c
            351-492             JAXUCZ010000002.1  31893101-31893242   c
            493-645             JAXUCZ010000002.1  31892863-31893015   c
            646-750             JAXUCZ010000002.1  31881843-31881947   c
            751-849             JAXUCZ010000002.1  31874493-31874591   c
            850-946             JAXUCZ010000002.1  31873018-31873114   c
            947-991             JAXUCZ010000002.1  31856683-31856727   c
            992-1064            JAXUCZ010000002.1  31855943-31856015   c
            1065-1089           JAXUCZ010000002.1  31855311-31855335   c
            1090-1147           JAXUCZ010000002.1  31848372-31848429   c
            1148-1323           JAXUCZ010000002.1  31847936-31848111   c
            1324-1335           JAXUCZ010000002.1  31845408-31845419   c
            1336-1360           JAXUCZ010000002.1  31845009-31845033   c
            1361-1403           JAXUCZ010000002.1  31843768-31843810   c
            1404-1492           JAXUCZ010000002.1  31842189-31842277   c
            1493-1596           JAXUCZ010000002.1  31839762-31839865   c
            1597-1726           JAXUCZ010000002.1  31836709-31836838   c
            1727-1838           JAXUCZ010000002.1  31825524-31825635   c
            1839-1994           JAXUCZ010000002.1  31822829-31822984   c
            1995-2127           JAXUCZ010000002.1  31822440-31822572   c
            2128-2327           JAXUCZ010000002.1  31821225-31821424   c
            2328-2392           JAXUCZ010000002.1  31820630-31820694   c
            2393-2557           JAXUCZ010000002.1  31815980-31816144   c
            2558-3051           JAXUCZ010000002.1  31815174-31815667   c
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..3051
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /note="FCH and mu domain containing endocytic adaptor 2"
                     /db_xref="GeneID:309129"
                     /db_xref="RGD:1565396"
     exon            1..183
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..2580
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /note="FCH domain only protein 2; Fcho2-like; FCH domain
                     only 2"
                     /codon_start=1
                     /product="F-BAR domain only protein 2"
                     /protein_id="NP_001178561.1"
                     /db_xref="GeneID:309129"
                     /db_xref="RGD:1565396"
                     /translation="MRPGGRGRSLGRRRRRRREAGAPWGPVRVYTAAGGCGRGTRRGG
                     GTMVMAHFVENFWGEKNNGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKL
                     AKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKK
                     TKEEVAGTLEAVQAIQNITQALQKSKENYNAKCVEQERLKKEGATPREIEKAAVKSKK
                     ATDTYKLYVEKYALTKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQ
                     IGQVHEEFINNMANTTIESLIQKFAESKGTGKERPGLIEFEECDPASAVEGIKPRKRK
                     TFALPGIIKKEKDAESVECPDADSLNIPDVDEEGFSIKPEANQNDTKENHFYSSSDSD
                     SEDEEPKRYRIEIKPVHPNNVHHTMASLDELKVSIGNITLSPAVSRHSPVQMNRNSSN
                     EELTKSKPSSLPTEKGTNDLLAWDPLFGSSLESSSAPLTSSSSARPTTPLSLGTIVPP
                     PRPASRPKLTSGKLSGINEIPRPFSPPITSNTSPPPTAPLARAESSSSISSSASLSAA
                     NTPTVGVSRGPSPVSLGNQDTLPVAIALTESVNAYFKGADPTKCIVKITGDVTISFPS
                     GIIKVFTSNPSPAVLCFRVKNISRLEQILPNSQLVFSDPSQCDSNTKDFWMNMQAVTV
                     YLKKLSEQNPAASYYNVDVLKYQVSSNGIQSTPLNLATYWKCSASTTDLRVDYKYNPE
                     AMVAPSVLSNIQVVVPVDGGVTNMQSLPPAIWNAEQMKAFWKLSGISEKSDSGGSGSL
                     RAKFDLSEGPSKPATLAVQFLSEGNTLSGVDIELVGTGYRLSLVKKRFATGRYLADC"
     exon            184..275
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            276..350
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            351..492
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            493..645
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            646..750
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            751..849
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            850..946
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            947..991
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1064
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1065..1089
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1090..1147
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1323
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1324..1335
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1336..1360
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1361..1403
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1492
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1493..1596
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1726
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1727..1838
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1839..1994
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            1995..2127
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            2128..2327
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            2328..2392
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            2393..2557
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
     exon            2558..3051
                     /gene="Fcho2"
                     /gene_synonym="RGD1565396"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctaggtggc gcatgcgccc tggagggcgc gggcggtctc tgggaagaag gcggcggcgg
       61 cggcgagagg cgggggcgcc gtgggggccg gtccgtgttt acacagcggc gggcgggtgc
      121 ggacgcggaa cccggcgcgg cggcggcacg atggtcatgg cgcatttcgt ggagaatttc
      181 tggggggaaa aaaataatgg ctttgatgtt ctgtaccata atatgaaaca tggacagata
      241 tcaactaaag aactagcaga ttttgtaaga gaaagagcta caatagaaga ggcatactcc
      301 agatcaatga caaaactagc gaaatctgca agcaattatt cacaacttgg aacatttgca
      361 ccagtgtggg atgtgttcaa aacatctaca gagaaattag caaattgtca tttggatctt
      421 gttagaaaat tgcaggaatt aataaaggaa gttcagaaat atggagagga gcaagtaaaa
      481 tctcataaaa agactaaaga agaagttgca gggactctgg aagcagtcca agccattcag
      541 aatataaccc aggctctcca gaagtctaag gaaaattata atgccaaatg tgtagaacag
      601 gaacgtctga aaaaggaagg agctacaccg agagaaatag aaaaggcagc tgttaagtcc
      661 aagaaagcta cagacaccta caaactttat gtggaaaagt atgcattaac aaaagctgat
      721 tttgaacaga agatgacaga aacagcccag aaatttcaag atattgaaga aacccatctc
      781 attcatataa aggaaattat aggatccttg tcaaatgcta taaaggaaat tcatttacaa
      841 ataggccagg ttcatgaaga atttataaat aatatggcta atacaacaat tgaaagtttg
      901 atacaaaaat ttgctgagtc aaaaggcaca gggaaagaaa gacctggcct tattgaattt
      961 gaggagtgtg accctgctag tgcagttgaa ggcataaaac caaggaaaag aaagactttt
     1021 gctttgcctg gaataattaa aaaggaaaag gatgcagaat ctgtggaatg tcctgatgca
     1081 gattcactta atattcctga tgtagatgaa gaaggtttta gtattaaacc agaagcaaat
     1141 cagaatgata ccaaagagaa ccatttctac tcatccagtg actctgactc tgaagacgaa
     1201 gaaccaaaga ggtaccggat agagataaag cccgtgcatc ccaataatgt gcatcacaca
     1261 atggcttctc tggatgaatt gaaagtgtcc atagggaata taacactgtc cccagctgtg
     1321 tctagacaca gtccagtaca gatgaatcgg aattcatcta atgaagagtt aacaaaatca
     1381 aagccgtctt ctctacccac tgagaaaggg accaatgatt tacttgcttg ggacccccta
     1441 tttggatcgt ctcttgagtc atcttcagct ccattaactt catcatcatc ggccagaccc
     1501 acgacacctc tttctttagg caccattgtt ccacctccaa gacctgcttc cagaccaaag
     1561 cttacttcag gcaaactgag tggaattaat gaaataccca ggccattcag cccacctata
     1621 acttctaaca ccagcccacc tcctactgct cccttagccc gggcagagag cagttcctct
     1681 atctcttcct ctgcgtcatt gagtgctgcc aatactccaa cagtaggtgt atcacggggt
     1741 cccagcccag tcagccttgg aaaccaggac actttgcctg tggcaatcgc ccttacagaa
     1801 tctgtcaatg cctactttaa aggagcagat cctaccaagt gtattgtgaa gattactgga
     1861 gacgtgacaa tatcatttcc aagtggaatt attaaagtct tcacgagcaa cccctctcca
     1921 gctgtgctgt gctttagggt gaaaaacatc agtagactcg agcagattct tccaaattca
     1981 cagcttgtgt tcagtgatcc atcacagtgt gattccaaca caaaagattt ttggatgaac
     2041 atgcaagctg ttactgtcta cctcaagaag ctgtcagagc aaaatccagc tgcttcttat
     2101 tataatgtag atgtactaaa ataccaggta tcatcaaatg gcattcagtc cactcctcta
     2161 aatcttgcaa catactggaa atgcagtgcc agcaccacag atctgagagt ggattataag
     2221 tacaacccag aggctatggt cgcacctagt gtgctttcca acatacaggt ggtggtacca
     2281 gtggatggag gagtcacaaa tatgcagtcc cttcctcctg caatatggaa tgcagaacaa
     2341 atgaaagcct tttggaaatt atctgggatt tcggagaagt cagacagtgg aggttctgga
     2401 tccctcagag caaaatttga tctttcagaa ggtcccagca agcctgccac actcgcggtg
     2461 caattcctta gtgagggaaa taccctctca ggagtagaca tcgagcttgt tggtactggc
     2521 tatagacttt ctttagtaaa gaagcgtttt gccactggac gatacttggc agattgttga
     2581 tggaaccaga atgcggtttt ctcaggggac tagtgggcac ccgccactct gcgtcacctg
     2641 ttcctcccaa acactatttc tacttgtatg atgtctttca aattcgctct ttgaaagctg
     2701 actacaaaca ttaaattgca ctttcaaagt attgttgaaa gaaatagcac tgaaatgacc
     2761 ttgtatacag taaatgatca aatgtgatat tctggaagca tgtgcattca aattgtcact
     2821 aaaattgacg cttgttatct tcagtgtctg tgttcttaaa aaggttagaa tgtagtaaca
     2881 agcctaaaat ttcaggagag caagcacaat gttatttagc tttccataag tgtttagact
     2941 cagagttaac ctttgaagtt tcctaagttt gaataaatat aacaagaaca tgaattttta
     3001 ggctttgaat gttaaatcag aactcaatct aattgagtta cgtgccataa g
//
