LOCUS       XM_017589060            1418 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus Fc gamma receptor and transporter
            (Fcgrt), transcript variant X3, mRNA.
ACCESSION   XM_017589060
VERSION     XM_017589060.2
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017589060.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1418
                     /gene="Fcgrt"
                     /gene_synonym="FcRn"
                     /note="Fc gamma receptor and transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 179 long SRA reads, 1 Protein"
                     /db_xref="GeneID:29558"
                     /db_xref="RGD:61811"
     CDS             153..1166
                     /gene="Fcgrt"
                     /gene_synonym="FcRn"
                     /codon_start=1
                     /product="IgG receptor FcRn large subunit p51 isoform X2"
                     /protein_id="XP_017444549.1"
                     /db_xref="GeneID:29558"
                     /db_xref="RGD:61811"
                     /translation="MYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAW
                     IWENQVSWYWEKETTDLKSKEQLFLEAIRTLENQINGTFTLQGLLGCELAPDNSSLPT
                     AVFALNGEEFMRFNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLG
                     HLERGRQNLEWKEPPSMRLKARPGNSGSSVLTCAAFSFYPPELKFRFLRNGLASGSGN
                     CSTGPNGDGSFHAWSLLEVKRGDEHHYQCQVEHEGLAQPLTVDLDSPARSSVPVVGII
                     LGLLLVVVAIAGGVLLWNRMRSGLPAPWLSLSGDDSGDLLPGGNLPPEAEPQGVNAFP
                     ATS"
     polyA_site      1418
                     /gene="Fcgrt"
                     /gene_synonym="FcRn"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gacagaggcc caggggtgtg cttaagagct cgtgggtgga gctggattcc ctcagagttc
       61 cacagtccta actgtgtaca gacaggatgt aagaaaagaa ctagaggctc cgagcagagg
      121 atccatcggc tgcagagccc cgtctcccac tgatgtatca tcttgcagct gtgtctgact
      181 tatcaacggg gcttccctct ttctgggcca cgggctggct gggtgctcag caatatctga
      241 cctacaacaa cctgcggcag gaggctgacc cctgtggggc ctggatatgg gaaaaccagg
      301 tgtcttggta ttgggagaag gagaccacgg atctgaaaag caaagaacag ctcttcttgg
      361 aggccatcag gaccctggag aaccaaataa atgggacctt cacactgcag ggcctgctgg
      421 gctgtgaact ggcccctgat aattcttcat tgcccacggc tgtgtttgcc ctcaatggtg
      481 aggagttcat gcggttcaac ccaagaacgg gcaactggag tggggagtgg ccggagacag
      541 atatcgttgg taatctgtgg atgaagcaac ctgaggcggc caggaaggag agcgagttcc
      601 tgctaacttc ttgtcctgag cggctgctag gccacctgga gaggggccgt cagaacctgg
      661 agtggaagga gccgccatct atgcgcctga aggcccgtcc tggcaactct ggctcctcag
      721 tactgacctg tgctgctttc tccttctacc cgccggagct caagtttcga ttcctgcgca
      781 atgggctagc ctcaggctct gggaattgca gcactggtcc caatggtgat ggatctttcc
      841 atgcatggtc attgctagag gtcaaacgtg gagatgaaca ccattaccaa tgtcaagtgg
      901 agcatgaggg gctggcccag cctctcactg tggacctaga ttcgcccgcc agatcttctg
      961 tgcctgtggt cggaatcatt cttggtttat tgctggtggt agtggccatc gcagggggtg
     1021 tgctgctatg gaacaggatg cgaagtgggc tgccagcccc atggctttct ctcagtggtg
     1081 atgactctgg cgacctattg cctggtggga acttgccccc ggaggctgaa cctcaaggtg
     1141 taaatgcctt tccggccact tcctgatgcc aacccaggcc ccatacccat tgcagcctgt
     1201 ggggctgtgt gacctcctga actgtctctg agcctcccga gggagccctg ggctggatgt
     1261 cctcctcgtg gatcccttct tttgtggcct gcttcagttt cccctcttaa tgtcaatggc
     1321 tatttccatc tccacataaa tttgggccca aatctgtgtg tgcatcgtta ttctcaggtt
     1381 tcaggcagcc ggaataaatt gaacaagttt gagaaaga
//
