LOCUS       NM_001416545            3284 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus F-box and WD repeat domain containing 10
            (Fbxw10), mRNA.
ACCESSION   NM_001416545 XM_039087279
VERSION     NM_001416545.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Ebstein,F., Lange,N., Urban,S., Seifert,U., Kruger,E. and
            Kloetzel,P.M.
  TITLE     Maturation of human dendritic cells is accompanied by functional
            remodelling of the ubiquitin-proteasome system
  JOURNAL   Int J Biochem Cell Biol 41 (5), 1205-1215 (2009)
   PUBMED   19028597
REFERENCE   2  (bases 1 to 3284)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Feb 8, 2023 this sequence version replaced XM_039087279.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.1686037.1,
                                           SRR26360181.1838240.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-695               JAXUCZ010000010.1  48012577-48013271
            696-866             JAXUCZ010000010.1  48016811-48016981
            867-1067            JAXUCZ010000010.1  48017898-48018098
            1068-1195           JAXUCZ010000010.1  48018200-48018327
            1196-1318           JAXUCZ010000010.1  48020287-48020409
            1319-1428           JAXUCZ010000010.1  48024329-48024438
            1429-1629           JAXUCZ010000010.1  48026321-48026521
            1630-1751           JAXUCZ010000010.1  48028948-48029069
            1752-1900           JAXUCZ010000010.1  48033759-48033907
            1901-2043           JAXUCZ010000010.1  48035206-48035348
            2044-2202           JAXUCZ010000010.1  48041396-48041554
            2203-2450           JAXUCZ010000010.1  48042853-48043100
            2451-3284           JAXUCZ010000010.1  48050303-48051136
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q23"
     gene            1..3284
                     /gene="Fbxw10"
                     /note="F-box and WD repeat domain containing 10"
                     /db_xref="GeneID:303215"
                     /db_xref="RGD:1563889"
     exon            1..695
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..3232
                     /gene="Fbxw10"
                     /note="F-box and WD-40 domain protein 10"
                     /codon_start=1
                     /product="F-box and WD repeat domain containing 10"
                     /protein_id="NP_001403474.1"
                     /db_xref="GeneID:303215"
                     /db_xref="RGD:1563889"
                     /translation="MENTEQKLRQSPYFCCEKGSNWVPVCHKCEACVLAWKIFATKEW
                     FRRVNDTSQRRFLVSILVQLNSLYLLQYFQNILETTQGKDFIYNRSRIKLNRKGGKEE
                     EVVKSSLNQMLDKTVESKMKEILCWFGNSTHRTKANYTLLLLQMCDSNLLLTAANVIR
                     VLFMKEWNNISGLREDASNVIFFPEKTYNATHDISYISWSARPKPVSFPMSRHLGNKL
                     GTENVDKGTTEAKAKSSLHVISEINKEIFGRGGTSRLGDEPCNLLLSLDHVQLLSSGF
                     SKYRDFIRDLPLHLSKYILRMLDKNSLNKCVFVSQHWATLVQQVKVDQSMHSFIQNQI
                     TLLQGSYTRGIDPNYANKVSIPVPKIVDDGKRSRSKNQKWKLRTKNDYNLWTAYQNQE
                     TQLIQMEERNVFCGTYNIRILSDTFDQNRIIHYSGGDLMAVSSNRKIHLLDIMQVREL
                     PIEFRGHAGSIRALFLSEEDNILLSGSYDLSIRYWDIKTGACIRIFYGHQGTITCLDL
                     YKNRLVSGAKDGQVKEWDIETGKCLKTFKHKDPILAARISETYIVSSCERGIVKVWHV
                     VTAQLQKTLTGHEGAVKCLFFNQWHLVSGGADGLVMAWSMVGKYERCLMAFKHPKEVL
                     QVSLLYLRVISACGDGKIRIYNFLNGNCLKVIKVDARGDPVLSFFYQGNRMVVHTDSS
                     ILVFQFENVKWQYSSDKNKTKKNKDKEEEREETSLGDTHSKSSLQVHSLRDSGSIKQE
                     FSKSRVLLKQTRNLSSDDVENPGSEASYPLQKSGKVPITPDRFLLTLNALQAHNSEEF
                     AYPHRPRIQVIDAWGLSIPYQRKVLTFKGKSVQHAVDQLRSSNLLTDVKQTNIPLEIR
                     KLQPDLKKSLHSPRVQASIPQPSLIRPKVSDSLRGDEHLTSSIDGRAGPLTSLQVIKP
                     NRMLAPRGGTTTLSLKKERPRFYTTLNPLRMNTGFMLLTVKEEKEFAEAKIKEYEASV
                     STKEVDPGKASKAAWIRKIKGLPIDHFLKEGKTAAPELGQNVFI"
     exon            696..866
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            867..1067
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1195
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1196..1318
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1319..1428
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1429..1629
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1630..1751
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1752..1900
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            1901..2043
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            2044..2202
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            2203..2450
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
     exon            2451..3284
                     /gene="Fbxw10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacttctac aggcagtttc tgggtcacat cagtttacca tccatcgcag tggcttatgt
       61 tttctccaga tgttcatccc gaagaggctc caaaaacgct atttctctgc taccctgtcc
      121 ctctggtgtt tggtggtgtt gctaacgggc aaggtttaaa tgagctggtc atctcagagt
      181 catggaaaac acggaacaaa aactcaggca gagcccctat ttttgttgtg aaaagggatc
      241 caactgggtc cccgtgtgcc ataagtgtga agcctgtgtc ttagcgtgga agatctttgc
      301 caccaaagag tggttccgga gggtcaacga cacatcccag aggagatttc tagtcagcat
      361 cttggtgcag ttaaatagtc tgtatttgtt acagtatttc cagaatatcc tagagactac
      421 ccaggggaag gacttcatct acaacaggtc tcggatcaaa ctcaatagga aggggggaaa
      481 ggaggaggag gttgtaaagt cctccttgaa ccagatgttg gataaaacgg tggagtcgaa
      541 gatgaaggag atcctctgct ggtttggcaa cagcacccac cggactaagg caaattatac
      601 tctcttgctg ctgcagatgt gcgactcaaa tttactgctc actgctgcca atgtgatcag
      661 agtcctgttc atgaaagagt ggaacaatat ctcaggcctc cgtgaagacg cctccaatgt
      721 gatattcttc cccgagaaaa cctacaacgc tacacatgac atctcgtata tctcttggtc
      781 agctagaccc aaacccgtgt cattcccaat gtccagacat ttaggtaata aacttgggac
      841 tgaaaatgtg gacaaaggaa caactgaggc aaaagcgaag agctcgctcc acgttatctc
      901 cgagataaat aaggagattt ttggaagagg gggcacgtcc aggctgggag atgagccgtg
      961 caacctgctg ctgagcctgg atcatgtcca actcctgtct tctgggttca gcaaataccg
     1021 ggactttata cgtgacctgc ctctccacct ctccaagtac attctaagga tgctggataa
     1081 gaacagcctg aacaagtgtg tctttgtcag ccagcactgg gccaccctgg tccagcaggt
     1141 caaggtggac cagtccatgc actccttcat tcagaaccag atcactctcc tgcaggggtc
     1201 ctacacgagg gggatagatc ctaattacgc caacaaagtc tccatcccgg ttcccaaaat
     1261 agtagatgac gggaagcgtt cacggtcaaa gaatcagaag tggaaactga gaacaaagaa
     1321 tgattacaac ttgtggactg cttaccagaa ccaggaaact cagctgatcc agatggagga
     1381 aaggaatgtt ttctgtggca cctacaacat ccgcattctc tctgacacgt ttgaccaaaa
     1441 cagaatcatc cactatagcg ggggcgatct aatggctgtg tcctccaatc ggaagatcca
     1501 cctcctggac atcatgcagg tcagggagct gcccatcgag ttccgaggcc acgctggcag
     1561 tatcagggct ctcttcctgt cggaggagga caacattctt ctgagtggga gttacgatct
     1621 gagcatcaga tactgggata taaaaactgg ggcttgcata cgaatctttt acggccacca
     1681 ggggacaatc acttgcctgg atctatataa gaacagactt gtatctggag caaaagatgg
     1741 acaggtgaaa gaatgggaca tagagacagg gaagtgcctg aagaccttta aacacaaaga
     1801 tcccatcttg gctgccagga tcagtgagac ctacattgtg agcagctgtg agcgaggcat
     1861 agtcaaggtg tggcatgtgg tcacagctca gctgcaaaag actctcactg ggcacgaggg
     1921 agccgtgaaa tgcctgttct ttaaccaatg gcatctcgtc tctggaggtg cggatgggct
     1981 ggtcatggcc tggagcatgg tgggaaagta cgaacggtgc ctgatggcct tcaagcatcc
     2041 taaggaggtg ctgcaggtgt ctctcctcta cctccgggtc atcagtgcct gcggtgacgg
     2101 caagatccga atttacaatt tcctcaatgg gaactgtctg aaggtgataa aagttgatgc
     2161 cagaggtgac cctgtgctat ccttctttta tcagggcaac aggatggtgg tccacacgga
     2221 cagcagtatt ctcgtgttcc agtttgaaaa tgtgaagtgg cagtacagct cagacaaaaa
     2281 caagacaaag aagaataagg acaaagagga ggaaagggaa gagaccagcc ttggggacac
     2341 gcattccaag tctagccttc aggtgcacag cctgagagac tctgggtcta ttaaacaaga
     2401 gttctcaaag tcccgggttc tcctgaagca aaccaggaac ctatcgtcag atgatgtgga
     2461 aaatcctgga agcgaagcca gttatccact gcaaaagtcc gggaaggtcc ctataacacc
     2521 tgacagattc cttctgactc tcaacgcctt acaggcccat aactctgaag agtttgccta
     2581 tccccatagg cccagaattc aagtcattga tgcctgggga ctttcaatcc cctatcagag
     2641 gaaagtccta actttcaaag gaaaatcagt tcaacatgca gtcgatcagc ttcgatccag
     2701 caatcttctt acagatgtga aacaaaccaa cattcccctt gaaatccgga aacttcagcc
     2761 cgacttgaaa aagtccttgc acagtcccag ggtccaggcc agtatccccc agcccagtct
     2821 tatccgtccc aaagtctccg acagcttaag gggcgatgag cacttgacca gttcaatcga
     2881 tggccgtgca ggccccctga ccagcttgca ggtcattaaa ccaaatcgaa tgctcgctcc
     2941 tcgaggaggc acaactaccc tgtctctcaa gaaagaacgg cctcgtttct acacaaccct
     3001 taaccctctt agaatgaaca ccgggttcat gctgttgacg gtgaaggagg agaaagaatt
     3061 tgcagaggcc aagataaaag aatatgaagc cagtgtatcc actaaagagg tcgacccagg
     3121 aaaagccagc aaagctgcgt ggatccgtaa gatcaaaggt ctgcccatag atcatttcct
     3181 gaaggaaggg aaaacagcgg cccctgaact tggacaaaat gtgtttatct aaaccaggct
     3241 tgggaatgta cagcagcatt acaacaaaga gaaaaccaag tgag
//
