LOCUS       NM_001025642            2955 bp    mRNA    linear   ROD 07-FEB-2025
DEFINITION  Rattus norvegicus F-box protein 46 (Fbxo46), mRNA.
ACCESSION   NM_001025642 XM_218414
VERSION     NM_001025642.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098945.1.
            
            On Jul 22, 2005 this sequence version replaced XM_218414.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098945.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2955
                     /gene="Fbxo46"
                     /note="F-box protein 46"
                     /db_xref="GeneID:292686"
                     /db_xref="RGD:1308393"
     exon            1..36
                     /gene="Fbxo46"
                     /inference="alignment:Splign:2.1.0"
     exon            37..2928
                     /gene="Fbxo46"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..1928
                     /gene="Fbxo46"
                     /codon_start=1
                     /product="F-box only protein 46"
                     /protein_id="NP_001020813.1"
                     /db_xref="GeneID:292686"
                     /db_xref="RGD:1308393"
                     /translation="MDRGSLLPFQLWCPRPFSKYSQNQPRPPSATLKPPVCPDTSSGT
                     EPDHRPAHLESTPPALAAEAPTSQHAPLLSTAASGDEGRVLLDTWYVIKPGNTKEKVA
                     FFVAHQCGGGSRASSMKVKGHWGSDSSKAKRRRRCLEPTKAPPDQGGQEGTPATEVAP
                     TSSGDDVDLLSVAEMVALVEQRAALALQSYPRPSTPAPVVFVSAEQGGPAKGLGSERR
                     SGGGDCSRVAEAVAHFEAQRDSPPTKGLRKEERPGPGPGEVRIAFRISNVREPQSPDG
                     SLANGGGGRPACPYPGSPGPGTRAKDKITCDLYQLISPSRDALPSNVEFLLARADEAS
                     EGETPAPARPEDTPPAPPPPPARDCGASGFHVDVVVTGVVDACIFFGKDGTKNVKEET
                     VCLTVSPEEPPPPGQLFFLQSRGPEGPPEPPPADTASKVPGPEDSEGTTDTSLCRLYR
                     HVSHDFLEIRFKIQRLLEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHHFKGIIE
                     AFGVRATDSRWSRDPLYRDDPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSYWMCC
                     RRADRETPGCRLGLHDNNWVLPCNGVGGGRAGREEGR"
ORIGIN      
        1 cccgcgtagt cgagagagct gcagcgcggg gagatggtgg cctggagagc tccccactac
       61 catcctggcc ctgagactga gtgactacct gctgctgttt gtcatcagtg cccagcatgg
      121 acaggggcag cctcctgccc ttccaactct ggtgcccccg gcccttcagc aagtattccc
      181 agaaccagcc gcgtccacct tccgcaaccc tcaagccacc agtctgtcct gacacaagca
      241 gcgggactga gccagaccac aggcctgcac acttggagag cacaccacct gccttggctg
      301 cagaagcccc cacctcccag catgctccac tcctctctac agcagcttca ggtgatgagg
      361 gtcgagtcct gctggacacg tggtatgtta tcaaacctgg aaatacaaag gagaaggtgg
      421 ctttctttgt ggcccaccag tgtggtggag gtagccgggc tagctctatg aaggtcaaag
      481 ggcactgggg cagtgacagc tccaaagcta agaggaggag gcgctgcctt gagcccacca
      541 aggctcctcc agaccaaggg ggccaagaag ggacccctgc cactgaggtg gcccccactt
      601 catccgggga tgatgtagac ctgctctctg tagcagaaat ggtggccctg gttgaacaga
      661 gagctgccct ggccctgcag agttacccac gcccgagtac cccagctcct gtggtctttg
      721 tgtcagctga gcagggggga ccagccaagg ggctagggtc agaaaggcgg tctggtggtg
      781 gtgactgcag ccgagttgct gaggcagtgg cccactttga ggcccagcgg gacagccctc
      841 ctaccaaggg tctccgcaag gaggagcggc caggccctgg gccaggagag gtgcgaatag
      901 ccttccgtat ctccaatgtc cgggagcccc agtcaccaga tggcagctta gccaatgggg
      961 gtggaggtcg gcctgcttgt ccctaccctg gtagtcctgg gcctgggact cgagccaaag
     1021 acaaaatcac ctgcgacttg taccagctga tcagcccctc tagggatgcc cttcccagca
     1081 acgtggagtt cctactggcc agggccgatg aagcaagtga gggtgagaca ccagccccgg
     1141 ccaggcctga ggacactcca ccagcacccc ctccgccccc tgcccgggac tgtggtgcat
     1201 caggattcca cgtggacgtg gtggtgacag gagtagtgga tgcctgcatc ttctttggca
     1261 aagatggcac caagaatgtg aaggaagaga ctgtgtgcct gaccgtgagc cccgaggagc
     1321 caccccctcc tggacagctc ttcttcctcc agtcccgggg gccggaaggg cctcctgagc
     1381 cacccccagc tgatacagca agcaaggtgc caggccccga ggattctgag ggcacaacag
     1441 acacctccct gtgccgcctg taccggcacg tgtcgcatga cttcctggag attcgcttca
     1501 aaatccagcg tctcctggag ccgaggcagt acatgctgct gctgccggag catgtgctcg
     1561 tcaagatatt cagcttcctg cccacacggg ccctggctgc cctcaagtgc acctgccacc
     1621 acttcaaggg tatcattgag gcctttggtg tacgagccac ggactctcgc tggagccggg
     1681 accccctcta ccgagatgac ccttgtaagc agtgccgcaa gagatatgag aagggtgatg
     1741 tgtcactctg ccgctggcac cccaaaccct accaccacga cctgccttat ggacgttcct
     1801 actggatgtg ctgccgcaga gccgaccgcg agaccccagg ctgtcgcctg ggcttgcatg
     1861 acaacaactg ggtactgccg tgtaacggag taggtggagg ccgtgctggc cgggaagagg
     1921 ggaggtgaag cctggggctg aggggacacc tgtgatacct agcccctccc cactttgctg
     1981 ggagctgggg accaggactg agtcaccagc cgacacctac cagtccatgc agcattgatc
     2041 tcccaccaga actgggacca ggtttggggg tcaacggggt aaataccttg cttgacctcc
     2101 gttggtttcc tattcttcag agccaggacc atggaccctc agagagggtt gtggtttttt
     2161 gctttttttt tttaaatcag catctcagtt tcacctccat ccgtccccaa ctgcatcccc
     2221 gagtctccac cccagagacc caccagcagg gagcagatgg cagctacttt ggtaccacct
     2281 gaggctttcc tcaagctggc cctctccgtt ctgtgcctcc cccagctgtc tttggagctg
     2341 tgtttaccca aggcgctgca tgctctgagg gtggctcatc caggccctta actcccaact
     2401 ctagtcggca cttttttgag gcagcccacc atttctagat gttttcctca ttaaataaaa
     2461 aaaaagaaaa tgttttcttc tgaacctcaa actaccagag tctccctttc ccttagaggg
     2521 aaaggagggg tgcaatcccc tcaagtgtaa gagaaccccc tttaagctct tgtcactgac
     2581 tctctcctca gtaaagctgt gaagcccttg cctcactcct ggatggcgag caggccagag
     2641 ggcaaggcca ggtctgaatt cccctgattc ttcttccact tggggttctc tctgaggcat
     2701 tagggtctct gcacccacca cacccccagc cacaagtttc tttagaatct tttggttacc
     2761 tggggccttg attttgagac agtttggtcc aaatactttt gtttagggtt ttttcttgtt
     2821 ttggggtttc attttgtttt ttccttcatt gtggttccgg aagcttctag tgtgtggcat
     2881 ctgaccaatt tttaattggt tctttctata aaatcaatat ttataaaaaa aaaaaaaaaa
     2941 aaaaaaaaaa aaaaa
//
