LOCUS       NM_001191576            1317 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus F-box protein 44 (Fbxo44), mRNA.
ACCESSION   NM_001191576 XM_002729561
VERSION     NM_001191576.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Sjogren,B., Swaney,S. and Neubig,R.R.
  TITLE     FBXO44-Mediated Degradation of RGS2 Protein Uniquely Depends on a
            Cullin 4B/DDB1 Complex
  JOURNAL   PLoS One 10 (5), e0123581 (2015)
   PUBMED   25970626
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Ebstein,F., Lange,N., Urban,S., Seifert,U., Kruger,E. and
            Kloetzel,P.M.
  TITLE     Maturation of human dendritic cells is accompanied by functional
            remodelling of the ubiquitin-proteasome system
  JOURNAL   Int J Biochem Cell Biol 41 (5), 1205-1215 (2009)
   PUBMED   19028597
REFERENCE   3  (bases 1 to 1317)
  AUTHORS   Glenn,K.A., Nelson,R.F., Wen,H.M., Mallinger,A.J. and Paulson,H.L.
  TITLE     Diversity in tissue expression, substrate binding, and SCF complex
            formation for a lectin family of ubiquitin ligases
  JOURNAL   J Biol Chem 283 (19), 12717-12729 (2008)
   PUBMED   18203720
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jul 17, 2010 this sequence version replaced XM_002729561.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.30160.1,
                                           SRR26643287.14960.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-288               JAXUCZ010000005.1  163875212-163875499 c
            289-575             JAXUCZ010000005.1  163874019-163874305 c
            576-702             JAXUCZ010000005.1  163871830-163871956 c
            703-798             JAXUCZ010000005.1  163871643-163871738 c
            799-934             JAXUCZ010000005.1  163871399-163871534 c
            935-1317            JAXUCZ010000005.1  163867029-163867411 c
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1317
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /note="F-box protein 44"
                     /db_xref="GeneID:500587"
                     /db_xref="RGD:1562463"
     exon            1..288
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
     exon            289..575
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
     CDS             311..1078
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /codon_start=1
                     /product="F-box only protein 44"
                     /protein_id="NP_001178505.1"
                     /db_xref="GeneID:500587"
                     /db_xref="RGD:1562463"
                     /translation="MAVGNINELPENILLELFTHIPARQLLLRCRPVCSLWRDLIDLV
                     TLWKRKCLQEGFITEDWDQPVADWKIFYFLRSLQRNLLHNPCAEEGFEFWSLDVNGGD
                     EWKVEDLSKDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEV
                     KDWFAARPDCGSKYQLCVQLLSSAHAPLGTFQPDPVMIQQKSDAKWREVSHTFSNYPP
                     GVRYIWFQHGGVDTHYWAGWYGPRVTNSSVIIGPPLP"
     exon            576..702
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
     exon            703..798
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
     exon            799..934
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1317
                     /gene="Fbxo44"
                     /gene_synonym="RGD1562463"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcagcgcga ccaaacgtgg gtgacaagga gaatggagag ggagaggggc cagtgttgtg
       61 ggattatggt tagggcgggg tctgatgagt agtgggcggg actgtgcctt aggtgctgtt
      121 ctccaacgcg gcacattgca aggagcaggt gacagcagga ggggagcagt gagggcccca
      181 gcagcgagag gtttagggtg tagtaggcag gtctgcattc cgggccacgc aagctcgggc
      241 cgcacagccc cacggtctgg caggatcact cagcgcggcg gatcggagga acaggctagg
      301 aaccgacacc atggctgtag gcaacatcaa cgagctgccg gagaacattc tgctggaact
      361 gttcacccac atcccggctc gccagctact gctgcgctgc cgaccagtct gcagcctctg
      421 gagagacctc attgacctgg tcacactctg gaagcgcaag tgccttcagg agggcttcat
      481 caccgaggac tgggaccagc ccgtggctga ctggaagatc ttctatttcc tgcgtagcct
      541 ccagaggaac ctccttcaca acccttgtgc cgaagagggc tttgagttct ggagcctgga
      601 tgtgaatgga ggagatgaat ggaaggtgga ggatctctcc aaggaccagc ggaaggaatt
      661 ccccaatgac caggtcaaga aatacttcgt gacttcctat tacacctgcc tcaagtccca
      721 ggtggtggac ctcaaggctg aagggtattg ggaggaactg atggacacca cccgaccgga
      781 catcgaggtc aaggactggt ttgcagccag gccggactgc gggtccaagt accagctgtg
      841 cgtccaactc ctgtcgtcag ctcacgcacc actgggaacc ttccagccgg acccagtgat
      901 gatccagcag aaaagcgatg ccaagtggag ggaggtctca cacacattct ccaactatcc
      961 gcccggcgtc cgctacatct ggtttcagca cggaggcgtg gacacccact actgggccgg
     1021 ctggtacggc ccgagagtca ccaacagcag cgtcatcatc gggcctccgc tgccctgatg
     1081 cctcctgagc cccagtcctc ggagccctaa ttggtaaaca gtcagaaagg gccaagcatg
     1141 ggaaggggag gtggaagtca gtcactccca gacctcattg ttagtcttcg cccccagctg
     1201 cctctgtgtg gagcttctaa tgtctgggcc acccttctcc ctagccctcc agcagagccg
     1261 cccctctaag gggcacagtg cctgaggttg ggcagataaa agaggtttcc ttccttc
//
