LOCUS       NM_001399654            3430 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus F-box protein 33 (Fbxo33), mRNA.
ACCESSION   NM_001399654 XM_006240119
VERSION     NM_001399654.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3430)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3430)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Jan 12, 2022 this sequence version replaced XM_006240119.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168929.1, SRR22582416.1092974.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-609               JAXUCZ010000006.1  82666619-82667227   c
            610-720             JAXUCZ010000006.1  82641442-82641552   c
            721-1406            JAXUCZ010000006.1  82639571-82640256   c
            1407-3430           JAXUCZ010000006.1  82635509-82637532   c
FEATURES             Location/Qualifiers
     source          1..3430
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..3430
                     /gene="Fbxo33"
                     /note="F-box protein 33"
                     /db_xref="GeneID:314157"
                     /db_xref="RGD:1307543"
     exon            1..609
                     /gene="Fbxo33"
                     /inference="alignment:Splign:2.1.0"
     CDS             170..1678
                     /gene="Fbxo33"
                     /codon_start=1
                     /product="F-box only protein 33"
                     /protein_id="NP_001386583.1"
                     /db_xref="GeneID:314157"
                     /db_xref="RGD:1307543"
                     /translation="MALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECL
                     FYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGG
                     SGGGTDTGNGGEESEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQKFSLFGDISV
                     VQQQGSLSSTYLSRVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPSSLSS
                     LSNSIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDS
                     NHVPLQRLSLLVHNASVMLKSLDNMPNDEHWKALSRKSSSLRVYLMAFDVKSEDMLKI
                     LKPSIPLERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDMIDTSGFPDLSDNRN
                     EDPLVLLAWRCTKLTLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELA
                     DQDVDPVHNLLEQVSLGLGQSWHAVLDIESLSVFTEPNRHFYREMQSFSEDI"
     exon            610..720
                     /gene="Fbxo33"
                     /inference="alignment:Splign:2.1.0"
     exon            721..1406
                     /gene="Fbxo33"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..3430
                     /gene="Fbxo33"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagtgccg cagccccgac cgccgggagc gcgaacccga gccggggccg cccgggtggt
       61 gcggtggcgg cggcggcagc ggctgcggct gcggcagctg cgccggctgc gggggctgct
      121 gcgaggactg cgcgggcggt cggggacgag cggccggcgg cggagccgga tggctctgtg
      181 cgggcaggcg gccggcgccg cgtcgctgcc cagcgaactc atcgtgcaca tcttctcctt
      241 tctgccggcg cccgaccggc tgcgggcctc ggcctcctgc tcgcactggc gggagtgcct
      301 cttctaccca gccctgtggc cccagctccg catctgcctc cgcgtctcgc cagcggagca
      361 gccgcggctc gagtttctca tgcgcaagtg cggctggttc gtacgggagc tacgggttga
      421 gttcgccgcg gagaattatc tgagcggagg cggcggcccg ggcgacggtg gcggaagcgg
      481 cgggggcacc gacacgggca acggagggga agaaagtgag gccctgcaac tctcctcccg
      541 ctggctagaa gtgctgcgca tctacttgga gctggtgttg tgcgtgctgc tcagcatccg
      601 gaacaacagg aacctccaga agtttagtct ttttggagat ataagtgtcg ttcagcagca
      661 aggaagtctg tccagcacat acctcagcag agtagaccct gacggcaaga agattaagca
      721 aattcagcag ctgtttgaag aaatactgag caatagtagg caactaaaat ggctgtcctg
      781 tgggtttatg ctggaaatag taaccccatc atcactgtcg tctctgtcta actccattgc
      841 caacaccatg gaacacctga gtttactgga caacaacatt cctggtaaca gcacgctcat
      901 caccgcagtc gaactagagc gctttgtaaa tctgcgctca cttgccctgg atttctgtga
      961 ctttacagct gagatggcga gagtcctgac cgacagcaac catgtgcctt tgcagcgact
     1021 gtctcttctg gtccacaatg cttcagtgat gctcaagtca ttagacaaca tgccaaacga
     1081 tgagcactgg aaggccctgt cacgaaagag ctccagcctc cgggtctatc taatggcttt
     1141 tgatgttaaa agtgaagaca tgctaaagat tctgaaaccc agtataccac ttgagagggt
     1201 tcactttgac agctacgtca cttgtgtctc aggggctatt gttgatctta tatccaggca
     1261 gtatgacaag ttcctcaccc attttatatt gatgaatgat atgattgata cgtctggttt
     1321 tccggatctt agtgacaacc gaaatgaaga tccattggtt ttattggcat ggcggtgcac
     1381 aaagctcact cttttggcaa ttcatggtta caccgtgtgg gcacacaacc tcattgccat
     1441 tgctcgtctt cgtggctctg acctaaaagt gcttgaagtc accgaagaaa gcattgattt
     1501 tgaccaaggt gaactagccg accaggatgt ggatcccgta cataaccttc ttgagcaggt
     1561 atccctgggc cttggtcagt cttggcacgc agtcttggac atcgaatcac tcagtgtctt
     1621 cactgaacca aatcgtcatt tttacagaga gatgcaaagc ttcagcgaag acatttagct
     1681 tttttaaaat gtataattcc tgtggctaca tatgcaagta gggtcccatt atgttttttt
     1741 cattagtgga aactaatcct tttgtgctgt gtttaatcag tattagcttt atagaattat
     1801 aaatgtatat tctacttctt gatcaaagaa cgtagtcggg tattggtttt agaagttcaa
     1861 agtgacactg tatagggctt tcacggttaa tgggattgtt agcaaatctt aaggacatac
     1921 agccaatgat tatctgaggt tactggctaa ctgtttttca ctgagttact ctgccttttt
     1981 gacattttta ttctttgttt gtcagaatcc agagctcagg agccaaatat ttttatacgt
     2041 atatatatat atatataaat atccataagc ctggtggatt tgtatgcaat gcactgcatc
     2101 tatgtattct gatagcatct cattgatttt tgtttgaaat agaaagaaag atagtatccc
     2161 aaatgagtta tctttaacag aaagctgagt ttaactttta ttacctatat aataattgat
     2221 attgccaatt accattctga atttcatata gtataagtta gacattgctt aatccccttt
     2281 taaatgtatt tacatagaca tgaacactca aattgctgga ttttttaaat atatctgaca
     2341 taattttttt catctgttac attcaagtta gcttgtttag cccagatttc agaatagtaa
     2401 aggaggaaag gaaccgcatt ccagggaaac ctctgaggcc aagtcagagt ccagaactgt
     2461 aaacgcacag gcctgcaagc caacattagt cgtgaaatcc ctaacacgtc actggattct
     2521 ctctgtcagc gcaagtgtca gctgccaaag aatagactta catgaagaag tgcccacatg
     2581 ctggcagggg ctggccggct ccggccagca gacactgcta gattgtaata tttaaggtcg
     2641 agtttcgacc tgtggtacac agctgtgctg tgctcagtca gcaacctcag aactctgaaa
     2701 aaaacataaa aaagaaaaaa aaagaaaaaa aacatgcacc tgtttcactg tgaatagtga
     2761 atgtaaagga aagaaaggaa aaccaaaagc ttgttccatc acaggtatga gctgctatga
     2821 ttcatgaaga acattccatg gagtatgttt taaaaccttg ttatatctga gaggctttaa
     2881 aagccaactt aactgtttca gggcaaccgc ggtacagacg tggtctctgt gagacttcca
     2941 cctgacccaa gttttaagtg gtacgaatgt tgtgcattta atgttaagga cagtctgcaa
     3001 taataagtaa gtagccagcg tgggtgccca gcagtgctga gacctggctg ctctattgta
     3061 cgctttggaa acacaattta tgcaacagat gtccagatat gattctattt atggaaaaag
     3121 tttatatgtt ttacaaatgg ttttaccatc ttatattaaa tgaccttttg acaggtgtgc
     3181 actgttttgt ctccagtgag cacataccat gcggatttta tatgtacatc agtagtgtga
     3241 atccactggc acagtgtgtg taaatgccag atgtggtgag attttatctt gtatatgtga
     3301 tcagataaaa taactcctga cagaaactgt aaggaaacca gctgaatgtt tgacctgatg
     3361 actgatgttg tatggtttat gttaaatgta tattctttta atcaatgaat aaagcattaa
     3421 aaaatgggca
//
