LOCUS       NM_001110491            1835 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus F-box protein 27 (Fbxo27), mRNA.
ACCESSION   NM_001110491 XM_001073901 XM_001073929 XM_001073956
VERSION     NM_001110491.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ebstein,F., Lange,N., Urban,S., Seifert,U., Kruger,E. and
            Kloetzel,P.M.
  TITLE     Maturation of human dendritic cells is accompanied by functional
            remodelling of the ubiquitin-proteasome system
  JOURNAL   Int J Biochem Cell Biol 41 (5), 1205-1215 (2009)
   PUBMED   19028597
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Glenn,K.A., Nelson,R.F., Wen,H.M., Mallinger,A.J. and Paulson,H.L.
  TITLE     Diversity in tissue expression, substrate binding, and SCF complex
            formation for a lectin family of ubiquitin ligases
  JOURNAL   J Biol Chem 283 (19), 12717-12729 (2008)
   PUBMED   18203720
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 9, 2021 this sequence version replaced NM_001110491.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091204.1, SRR21887623.1940572.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760475
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               JAXUCZ010000001.1  93108441-93108576
            137-517             JAXUCZ010000001.1  93108886-93109266
            518-629             JAXUCZ010000001.1  93110916-93111027
            630-725             JAXUCZ010000001.1  93111139-93111234
            726-861             JAXUCZ010000001.1  93112612-93112747
            862-1835            JAXUCZ010000001.1  93114339-93115312
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1835
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /note="F-box protein 27"
                     /db_xref="GeneID:499114"
                     /db_xref="RGD:1563982"
     exon            1..136
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
     exon            137..517
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
     CDS             163..1005
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /note="rCG54033-like"
                     /codon_start=1
                     /product="F-box only protein 27"
                     /protein_id="NP_001103961.2"
                     /db_xref="GeneID:499114"
                     /db_xref="RGD:1563982"
                     /translation="MGAWTSRTRIPMPEPDPQEALDLSRLPPELLLLVLSHVPPRTLL
                     VHCRRVCRAWRALVDGQALWLLLLARDHSAAGRALLTLARRCLPPAREGTPCPLGQFC
                     ALRPLGRNLLCNPCGQEGLRKWMVRHGGDGWVVEKNRKPVPGAPSQTCFVTSFSWCRK
                     KQVVDLEEKGLWPELLDSGGVEIAVSDWWGARHDSGCKYRLFVTLLDAHQNVIEKFSS
                     VPDPIEQWNNDVYLQVTHVFSNIRRGVRFVSFEHWGQDTQFWAGHYGARMTNSSVIVR
                     VCPS"
     exon            518..629
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
     exon            630..725
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
     exon            726..861
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1835
                     /gene="Fbxo27"
                     /gene_synonym="RGD1563982"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgccaggcgt ccactgcaga tttagggtca ctccaagtgg ttgattgttg cggaaccgcg
       61 cagactgtgc cagagccctg gcctaatctg tgacccctgg tagattccca cgctgtccgc
      121 ggatagccgg aaggagtcaa aaccaagcgg ggcgcggcga ccatgggtgc ctggacttcc
      181 agaacccgga tccctatgcc ggagcccgat ccccaggagg ccctggacct gagtcgactg
      241 cccccggagc tgctcctgct ggtactgagc cacgtgcccc cgcgcacgct gctggtacac
      301 tgccgccggg tctgccgcgc ctggcgcgcg ttggtggatg gccaggccct ttggctgctg
      361 ctgctggccc gagaccacag cgcagcgggc cgcgccctgt tgacgttagc ccgccgctgc
      421 ctgcccccag cccgcgaagg cacgccctgc ccgctgggcc aattctgcgc attaagaccg
      481 ctaggacgca acctcctctg caacccctgt ggccaagagg gcctgcgcaa gtggatggtg
      541 cggcatggtg gggatggctg ggtggtggag aagaacagga aacctgtacc tggggccccc
      601 tcacagacct gcttcgtgac ttccttcagc tggtgtcgaa agaagcaggt tgtggaccta
      661 gaggagaagg gtctatggcc agagctgctg gacagtggtg gtgtggagat tgctgtgtct
      721 gactggtggg gagctcgaca cgacagtggc tgtaagtacc gtctctttgt cacgcttctt
      781 gacgctcacc agaacgtcat agagaagttc tcctctgtgc cggaccccat tgaacagtgg
      841 aacaacgatg tctacctgca ggtcacccac gtgttctcca acatcaggag gggcgtccgt
      901 tttgtgtctt ttgaacactg gggccaggac acacagttct gggctggcca ctatggggcc
      961 agaatgacga actccagcgt gattgtacga gtctgtccat cctagtcaaa aggccaccat
     1021 tttgacaaga caatctgact gtgccttcct ggagctgtca tctggaaacc ctcatgagtc
     1081 aagcactgtc cctccctggt tcatgaaact ttaggatcca ctgaagggtc ctgcttggcc
     1141 ttttttcaga gtctggaaca cggaagtcct ccatcaggtc tgcctgttgc tgctgcttta
     1201 gagcatgggt gcctgggtgc ccggatgcac aggtgcctag atgcacgggt gccctgatgc
     1261 atgggttccc tgatgcatgg gtgcatgctg gtcttagatc acaagctgtc cccgatattg
     1321 atccctgacc cttttttgag acagatgcct ttggcgcttt gtgctgggac tacaggcaca
     1381 cactgacacc actcagcttt gtgcagtgct ggggatgagc ccagggtttc gtgcatgcca
     1441 ggcaagcatt ttgctctccg agcaacatgc cagcatcccc tctggtcaca tgctgtttct
     1501 gcctcaggga ctttctctgt cccttcactg aagccctcta cttatggctg aactcagaat
     1561 ttatggttag caaaactcca gctcccttgg gtaaggaacc aaagctttct tgactacaac
     1621 caggcttccg tattgaaggg tgtcttaggg tatctaccca cagattttct ccaaacaatt
     1681 aggaagtgcc tagagcccag gccctgatca tcacagatgt ctataattgt gttatattta
     1741 aagttacctt tcattttctc aaacaatgag agaataacac actggcaata tctacctgcc
     1801 aattgcactg taataaattg attattttgc ctaaa
//
