LOCUS       XM_039082672            2302 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus F-box and leucine-rich repeat protein
            2 (Fbxl2), transcript variant X1, mRNA.
ACCESSION   XM_039082672
VERSION     XM_039082672.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082672.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2302
                     /gene="Fbxl2"
                     /note="F-box and leucine-rich repeat protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 12 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 24 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363156"
                     /db_xref="RGD:1562243"
     CDS             174..1493
                     /gene="Fbxl2"
                     /codon_start=1
                     /product="F-box/LRR-repeat protein 2 isoform X1"
                     /protein_id="XP_038938600.1"
                     /db_xref="GeneID:363156"
                     /db_xref="RGD:1562243"
                     /translation="MSTHDDLRVAFSKLSPVSLRTRTGSDPRIDVSLVHGPRIFSFLD
                     IVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVENISKRCGGFLRKLSLR
                     GCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVT
                     NSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH
                     IQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCP
                     RLQVLEAARCSHLTDAGFTLLARNCHDLEKMDLEECVLITDSTLIQLSIHCPKLQALS
                     LSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDC
                     QQVTRAGIKRMRAQLPRVKVHAYFAPVTPPPAVAGSGHRLCRCCVIL"
ORIGIN      
        1 acgggcgtcg ccggcgccgt gtgacttcag gctgtgggcg cgctcgcggc catggttttc
       61 tcaaacaatg atgacggcct tatcaacaag aagttaccca aggagctcct cctaagttct
      121 gcagttgtca aattgttgtt cgttgtggag gctgacacat cttaattctt tacatgagta
      181 cacatgatga tcttcgagtg gcattttcca aactgtcacc agtgtccctc agaacaagaa
      241 caggttctga tccaaggata gatgtctctt tggtgcatgg cccaagaata ttctccttct
      301 tggatatcgt aactctatgt cgatgtgcac agatttccaa ggcctggaac atcttagccc
      361 tggatggtag caactggcag cgagtggatc tttttaactt tcaaacagat gtagagggcc
      421 gagtggtgga aaacatctcc aagaggtgcg ggggtttcct tagaaagctc agcttgcgtg
      481 gctgcatcgg cgtcggggac tcctccttga agacctttgc acagaactgc cggaacattg
      541 aacacttaaa cctcaatggc tgcacaaaaa tcactgacag cacgtgttac agccttagcc
      601 gattctgttc caagctgaaa catctggatc tcacgtcctg cgtgtctgtc accaacagct
      661 ccttaaaggg catcagcgag ggctgccgga acctggagta tctgaacctc tcctggtgtg
      721 accagatcac aaaggaaggc attgaggcgc tggtgcgggg gtgccggggt ctgaaagccc
      781 tgctcctgag gggttgtaca cagttagagg acgaagccct gaaacacatt cagaaccact
      841 gccatgagct cgtgagcctc aacctgcagt cttgctcacg catcactgat gacggcgtgg
      901 tgcagatctg taggggctgc caccggctac aggcgctgtg tctctcgggt tgtagcaacc
      961 ttacggatgc atctctcacg gccttgggcc tgaactgccc cagactacaa gttttggagg
     1021 ctgcccgatg ctcccatctg accgatgcag gcttcacact gctggctcgg aattgtcatg
     1081 acctggagaa gatggacctt gaagaatgtg tcctgatcac tgacagcact ctgatccagc
     1141 tctccatcca ctgccccaag ctgcaagccc tgagcttgtc ccactgtgag ctcatcaccg
     1201 atgaagggat cctacacttg agcagcagca cctgtgggca cgagagactc cgggtactgg
     1261 agctggacaa ctgccttctt gtcactgacg cctcactgga gcacctggag aactgccggg
     1321 gcttggagag actggagctg tacgactgcc agcaggtcac ccgtgcaggc atcaagcgta
     1381 tgcgggctca gcttcctcgt gtcaaagtcc atgcctactt tgctccagtc acccctccac
     1441 cagcagtggc aggaagtgga catcgactgt gcagatgctg tgttatactc tgacagcagc
     1501 tgcttaggcc atgggcccta ccctccaggt tagaccagtc tcctgactgc tcgctccatc
     1561 tctggactct ccgtggtgaa agcattacag gtaaaaacct tcggcccaca tacctgcaga
     1621 aactggtgat gcccagcacc ttaacgtcac taggatgcaa gcagacccag gcccgtgtca
     1681 cttaccaccc ggcaagagtg gtgtggtgca gcctggagcc catcagaggt gggtacctag
     1741 gcgtatgagc cccatctggc tttgtcagca ttctacgtac accttcagtg ttagcacaac
     1801 cctagcagag caagagtctg ttggtttcct acctgatctt tacgccagtg gtctaatgta
     1861 attcagagca cttcctactg atctgcagga cttgccactg tgaggactaa atagcacctt
     1921 tatcaacgtg actgtactgc aaactcagag tggctggtag tttgccatgt agaaacacgt
     1981 gtgaaaggca tgttaacata cttgcagaag acaccaaaga tacaaggcct ctgagctggg
     2041 cgggcgggct cgtcaccttt ctctttctgt cagctcatca tacccaagtc tagggaccaa
     2101 acccaagccc ctttgcatcg atccatggga aattatacgc tctgccatat gctacagcac
     2161 acagtgcact ctgctaaagg agaaaagcca attaagccca cactcctcaa aaaactcgca
     2221 ggaaccttga agaaatccag aattaaggct taaattatct ataatataat caagtaaaac
     2281 taatgaacgg atatacgtag aa
//
