LOCUS       XM_215832               2157 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus fibulin 7 (Fbln7), mRNA.
ACCESSION   XM_215832
VERSION     XM_215832.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_215832.10.
            
            On Jan 21, 2021 this sequence version replaced XM_215832.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-328               JACYVU010000118.1  39978646-39978973
            329-488             JACYVU010000118.1  39992534-39992693
            489-601             JACYVU010000118.1  39994682-39994794
            602-602             "N"                1-1
            603-659             JACYVU010000118.1  39994795-39994851
            660-785             JACYVU010000118.1  40004641-40004766
            786-923             JACYVU010000118.1  40006776-40006913
            924-1061            JACYVU010000118.1  40008160-40008297
            1062-1200           JACYVU010000118.1  40011558-40011696
            1201-2157           JACYVU010000118.1  40011948-40012904
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2157
                     /gene="Fbln7"
                     /note="fibulin 7; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: inserted 1 base in
                     1 codon; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 ESTs, 3 Proteins, and 92%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 59 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:296145"
                     /db_xref="RGD:1310131"
     CDS             254..1573
                     /gene="Fbln7"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: fibulin-7"
                     /protein_id="XP_215832.6"
                     /db_xref="GeneID:296145"
                     /db_xref="RGD:1310131"
                     /translation="MGPGSQRTLVLLLLLLASPGARAFQSCLNKQQLLTTVRQLQQLL
                     KGQETRFTEGIRNMKSRLTALQNTVSKMTPDAPPVSCPALDAPPNGKKFGSKYLVDHE
                     VHFTCNPGFQLVGPXSVVCLANGTWTGEQPRCRDTSECSSQPCHNGGTCVEGVHHYRC
                     ICPPGKTGNRCQHQTQAAAPGGVAGDSAYSRAPRCAQVEREQHCSCEAGFHLSGTAGG
                     HSVCQDVNECEIYGQEGRPRLCMHACVNTPGSYRCTCPSGYRILADGKSCEDVDECAG
                     PQHMCPRGTTCINTGGGFQCVNPECPEGSGNISYVKTSPFQCERNPCPMDSRPCRHLP
                     KTISFHYLSLPSNLKTPITLFRMATASVPGHPGPNSLRFGIVGGNSRGHFVMQRSDRQ
                     TGELILIQTLEGPQTLEVEVDMSEYLERSFQASHVSKVTIFVSRYDF"
ORIGIN      
        1 cgtcgcaccc ggtcttttcc agagcagagg cttgggcgcg ctcccaggcg cattccaagc
       61 tccgcagccc ctcctctctc gcctccgcca caggctggcg cctccccgca tcgtcgggac
      121 agtctcgtgc aggcggctgc ggacgatagt ggccttggga gctgcaaggg actcgtgcac
      181 cgtggggact cagggccggc cagggaacag cgatctacct gccttcccca ccagccaggt
      241 tgtgcggggc aagatggggc caggctctca gcgcacgctc gtccttcttt tgctgctcct
      301 cgccagccct ggagcgcggg ctttccagag ctgtctcaac aaacagcagc tcctcacgac
      361 cgtccgccag ttgcagcagc tgctgaaggg ccaggagacc cgcttcaccg agggcatccg
      421 aaacatgaag agccggctga cggcactgca gaacactgtt agcaaaatga ccccggatgc
      481 acctccagtt tcctgcccag ctctggatgc ccctcctaat ggcaagaagt ttgggagcaa
      541 gtacttagtg gaccacgaag tccattttac ctgcaaccct gggttccagc tggttgggcc
      601 angcagcgtg gtatgccttg ctaacggtac ctggactgga gaacagcccc gctgtagaga
      661 taccagtgaa tgctccagcc agccttgtca caatggtggg acgtgtgtgg aaggtgtcca
      721 ccactacaga tgcatctgcc ctccaggaaa aactgggaac cgctgtcaac atcagacgca
      781 ggctgcggcc ccggggggtg tggccggcga ctccgcctac agccgtgcgc cacgctgcgc
      841 gcaggtggag cgagaacagc actgcagctg cgaggccgga ttccacctga gcggcaccgc
      901 gggtggccac agcgtctgcc aggatgtgaa tgagtgtgag atctatgggc aggaaggacg
      961 gccccggctc tgcatgcatg cctgtgtgaa cacccctggc tcctaccgat gtacctgccc
     1021 gagtggatac cggatcctgg ctgatgggaa gagctgtgag gacgttgatg agtgtgcagg
     1081 cccacagcac atgtgccccc ggggaaccac atgtatcaac actggagggg gcttccagtg
     1141 tgtcaaccct gagtgtcctg agggcagcgg caatataagc tacgtgaaga catctccctt
     1201 ccagtgcgag agaaaccctt gtcccatgga cagcaggcca tgtcgccacc tgcccaagac
     1261 catctccttc cattacctct ctctcccttc caacttgaag acacccatca cgctcttccg
     1321 catggccaca gcctcagttc ctggccatcc tggacccaac agcctgcgct ttgggatcgt
     1381 gggtgggaac agccgtggcc actttgtaat gcagcgctca gaccggcaga caggagagct
     1441 cattcttata cagaccctgg aggggcctca gactctggag gtagaggttg acatgtcgga
     1501 atacctggaa cgctccttcc aggccagcca tgtgtccaag gtcaccatct ttgtgtctcg
     1561 atatgacttc tgaggatgcc atgggaatcg ggaggctggg gtttgagatc tgggctgatt
     1621 tctcttcccc aaggtcacac tgtgggcaag agctgtgatg gtcatgtctt ctctttatca
     1681 tattcctacc ttctctactt gttctctcag gcttctagaa caatgctatg ttctgaccca
     1741 ggggctggca caggagagaa gccacaaaca aatgctgttt ccacaatcac actactttta
     1801 tttttttctg ctttaaggcc cacccctacg ctgttaggag acagcacaga atttcaaaat
     1861 gctatgtgaa tgaccatgtg agtttgaacc agctggggga gaagctcatg gtgtgtgtgc
     1921 ttgagacaat agccaacagt tctgcattga ggtcaccaag ctttttgtgg ctaagcatgt
     1981 tctaactctg tgggtggtct aatgcccctg tgagctacct acatgatact ttaccctgcg
     2041 gcattccagc caaccttctc atcagcaagt tatagaggag actagcaacc ccgagtggat
     2101 ccttctagac caaggagtca acattaaatc atggattttg tcagtttctt cacttga
//
