LOCUS       XM_039087460            3837 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Fas binding factor 1 (Fbf1),
            transcript variant X9, mRNA.
ACCESSION   XM_039087460
VERSION     XM_039087460.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3837
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3837
                     /gene="Fbf1"
                     /note="Fas binding factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 5 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
     CDS             133..3699
                     /gene="Fbf1"
                     /codon_start=1
                     /product="fas-binding factor 1 isoform X7"
                     /protein_id="XP_038943388.1"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
                     /translation="MALKAKKGLKGSIDDVLGDLLGDDTVLLEKPVETASHAKDTSSS
                     PQWLSSKAKFLPKDSAGGLAAADAEVLCFHLPWTQVSSDSDADPQVFLQNMKDLDSMD
                     DDLFGRMKSHPPSGKGTAKASGKEVPSKPKPAGTLTADEKGDAIPTKKPPPASSRFGL
                     QYKKFSFEDFEDPLAGLLSDEEEETAKKPPATESKLAPKSPSTAAGQGPSVPLTPGDT
                     PIRKKEPLFDEGDDIMTTLGFEDSPKAERKKAGDQEGPLPARSKLDELLGRGTAAKLL
                     PRPGTGERREFKLDKKYQKPEDKEDSWDDEILTFGAYQPTVASSEGRQSRRQSVSRFL
                     GEGGPDLKGETLSFKQSPPPASSPIHPRKGGADWLGLKDDDLDLLSPSPVQKAQQEDS
                     AMTPSLLPPTNQPSAPEPHSVPTGLPSAAKPPAKGARPSVKASQVSSPKASEEKEDDW
                     LSHVISQKKSQNLAREERTGPSKDLNSPGSRSQIPASSLPIASTQVLEQASAGEASRP
                     TTQGIAAVRPAVTGAPVSWSQATTVVPVDDPKRGTASASGDFSSREPAVYIPHSQEPT
                     GLSVPIQTLLPESMMQSLLPGSGFQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEA
                     QVRKLELERSQHRMLLESLQQRHQADLELIEDAHRSHVKVLETSYQQREEQLRREKEV
                     LSAQHASYCQEAERARTELVAQHQRQMAMAEQEKDQEVARLRELQQASILEMRKDHEH
                     QLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHVTTSQER
                     ELGIRQQDEQLRALQERLGRQQRDMEEERSRLQEVIGKMEVRLSEQSRLLEQERWRVA
                     AEKSKAESAQRTLEEQRKIMVQQVAMEREELERAKSALLEEQKSVMNKCGEERRRLAA
                     EWAEFFTQQKLSKERAEREAERAMHADTQRESTIISLTKEQAELTVRACELRAKEEKL
                     IAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEARQ
                     MQTEQQGRLQVVQRQQEWLRQQEQRVHQARFQSPSCPSGPPLFPPTESLSLVLAQEHL
                     SLAQQRLQLDRVRQEAPSSLPGLPPRAQGPAASSLDAVQAPASTAPQRSQTAAVQMPT
                     HLLAKLLLLKHTAEEDHDFLENEQFFLETLKKAPYNMAYHSA"
ORIGIN      
        1 actccacctt ctatttgagg ccggaggcgg cgtggtggga atgtcgccgg tgcagaggtg
       61 ggaagatgac cttgctgggc aagagtgcac atgactggac agtgaggagc tgcagaaagc
      121 cccaaagcca ggatggcact gaaagccaag aaaggattga aaggatccat tgatgacgtc
      181 cttggtgacc tcctgggaga tgacacagta ctgcttgaga agcctgttga gacagcgtca
      241 catgccaaag acacatcgag ttcacctcag tggctttcct caaaggcaaa gttcctccca
      301 aaagacagtg ctgggggact ggcagcagcc gatgctgagg tcctgtgttt tcacctcccg
      361 tggactcagg tctccagtga ctcggatgca gacccacagg tcttcttgca gaacatgaag
      421 gacctggaca gcatggacga tgatctcttt ggtcggatga agtctcaccc accctctggc
      481 aaaggaactg caaaggcctc tgggaaagaa gtacctagca agcccaaacc tgctggcaca
      541 ttgacagctg atgagaaagg ggacgccatt cccactaaga agccaccacc agcttccagc
      601 aggtttgggc ttcagtacaa gaagttttcc tttgaagact ttgaggaccc gctggcgggg
      661 cttctctctg atgaggagga agagactgcc aagaagccac ctgcaacgga gagcaaactt
      721 gctcccaaga gccccagcac agccgcaggc caaggtcctt ctgttcctct gactcctggg
      781 gatacaccca tccggaagaa agaacctctc tttgatgaag gggatgacat catgaccacc
      841 ctgggctttg aagacagccc caaggcagag aggaagaagg caggagacca ggaagggccc
      901 ctccctgctc gctccaagct ggatgaactg ctgggtcggg gcacagctgc caagctcctc
      961 cctcgcccag gcactgggga acgcagagag ttcaagttag acaagaagta tcagaagcca
     1021 gaggacaagg aagacagctg ggatgacgag atcctcacct ttggggctta ccagcctacc
     1081 gtggcctcct ctgagggccg acagtcccgc aggcagtcag tcagcaggtt cttgggagaa
     1141 ggtggcccag accttaaggg agaaacccta agcttcaaac agagccctcc accagcttcc
     1201 agtcctatcc accccaggaa aggaggagcc gactggttag gccttaagga cgatgacctg
     1261 gacctgctgt ctccctctcc tgttcaaaag gcccaacagg aagactcagc catgacaccc
     1321 tctctcctac ctccaacaaa ccagccctca gccccagagc cacactctgt cccaactgga
     1381 cttccctcag cagcaaagcc accagccaag ggtgcaaggc cctctgtcaa agccagccag
     1441 gtctcctcac cgaaagcctc tgaggagaaa gaggatgact ggttgagcca tgtcatatct
     1501 cagaagaaat cccaaaatct agccagagaa gagcgtactg ggccctccaa ggatctgaac
     1561 tcaccagggt cacggagtca gatccctgct agcagccttc ctatcgctag cactcaggtc
     1621 cttgagcagg cctctgctgg agaagcctca agaccaacca cacaaggaat tgcagctgtc
     1681 aggcctgctg tcacaggggc ccccgtgagt tggagccaag ctaccactgt tgtccctgta
     1741 gatgacccca agagaggaac ggcctctgcc tctggggact tctctagcag agagcctgca
     1801 gtttacatcc cgcattccca ggaacctacc gggctctctg tgcctatcca gaccctcctc
     1861 ccagagtcca tgatgcagag tctgctgcca ggctcgggat tccagaagca gctcctggca
     1921 gcccaagggc agcttcagag cagcactgcc cagcttcagg ttgagctgct gcagagccag
     1981 accaagctgt cagagctgga ggcccaggtg cggaagttgg agctggagcg tagccagcac
     2041 aggatgctgc tggagagttt gcagcagcgg caccaggcag acctggagct cattgaggac
     2101 gcgcacagaa gccatgtcaa ggtgctagaa acatcctacc agcagcggga ggagcagctc
     2161 cgcagagaga aggaggtgct gtccgctcag catgcatcgt actgccagga agctgagcgg
     2221 gccaggactg agctcgtagc ccagcaccag cggcagatgg ccatggctga gcaggagaag
     2281 gaccaggagg ttgcacggct tcgggagctt cagcaggcgt ccatcctaga gatgcgcaag
     2341 gaccacgagc accagctaca gcggctgaaa atgctgaagg accaagagat cgatgctgtc
     2401 accagtgcta cctcccatac tcggtccctg aacggcatca tcgagcagat ggagaagttt
     2461 tccagcagct tgaacacgct gtcctcccgt gtggaggcct cccacgtcac cacctcacag
     2521 gaacgagagt tggggattcg gcagcaagat gagcagttgc gagctctgca ggagaggctg
     2581 ggccggcagc aacgagacat ggaggaagag cggagcaggc tacaggaggt catcgggaag
     2641 atggaagtcc gcctgagtga gcagagccgg ctcctggagc aggaacgctg gcgggtggct
     2701 gctgagaagt ccaaggcaga gtcagcccaa cgcactctgg aggagcagag gaagatcatg
     2761 gtccagcagg ttgccatgga gagggaggag ctggagagag ccaagagcgc cttgctggag
     2821 gagcagaagt cagtcatgaa taagtgtggg gaggagcggc ggcgcctggc agcagagtgg
     2881 gctgagtttt tcacacagca gaagctgagt aaggagcggg cagagcgcga ggctgagagg
     2941 gcgatgcacg cagacaccca gcgagagagc accatcatca gcctgaccaa ggagcaggca
     3001 gagctgacag ttagggcctg tgagctccgg gccaaggagg aaaagctgat tgctgagagg
     3061 gaggctttgg agagagagcg ccaagagctc cgactagaga aggacaggtt gcacaaagcc
     3121 agcctgcgcc tccaggcccg cgcccaggag gtggaacaca tgagtaaggt agcctccaag
     3181 aagtatgagg agggtgagca ggccttgcag gaggcccggc agatgcagac tgagcagcag
     3241 ggccggctgc aggtggtcca gaggcagcag gagtggctgc ggcagcagga gcagcgtgtg
     3301 catcaggcaa ggttccagtc cccctcttgt ccctcaggcc cacctttgtt tccgcccact
     3361 gagtctctct ccttggtgct ggcacaggag cacctgagcc tggcccagca gcggctgcag
     3421 ctggaccgcg tgcggcagga agcaccttcc agccttccag ggctgccccc cagagcccag
     3481 ggcccagcag cctccagcct ggatgctgtc caggcccctg cttccactgc tcctcagcgt
     3541 agccagacgg ctgccgtgca gatgcccaca caccttcttg ccaagctgct gctgctgaag
     3601 cacacagcag aggaggacca tgacttcttg gagaatgaac agttcttcct ggagactctg
     3661 aagaaagcgc cttacaatat ggcttaccac tctgcctgaa aatgcccatt gcctcctcgg
     3721 cgagcatctg gccctgcagc tctctcccac ggccgaccag ctcccatgtc catgaaaggc
     3781 tcctcagaac gtactgcact acccagggcc tgattacaag ttcttgtatg gacaggg
//
