LOCUS       XM_039087459            3905 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Fas binding factor 1 (Fbf1),
            transcript variant X8, mRNA.
ACCESSION   XM_039087459
VERSION     XM_039087459.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3905
                     /gene="Fbf1"
                     /note="Fas binding factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
     CDS             201..3767
                     /gene="Fbf1"
                     /codon_start=1
                     /product="fas-binding factor 1 isoform X7"
                     /protein_id="XP_038943387.1"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
                     /translation="MALKAKKGLKGSIDDVLGDLLGDDTVLLEKPVETASHAKDTSSS
                     PQWLSSKAKFLPKDSAGGLAAADAEVLCFHLPWTQVSSDSDADPQVFLQNMKDLDSMD
                     DDLFGRMKSHPPSGKGTAKASGKEVPSKPKPAGTLTADEKGDAIPTKKPPPASSRFGL
                     QYKKFSFEDFEDPLAGLLSDEEEETAKKPPATESKLAPKSPSTAAGQGPSVPLTPGDT
                     PIRKKEPLFDEGDDIMTTLGFEDSPKAERKKAGDQEGPLPARSKLDELLGRGTAAKLL
                     PRPGTGERREFKLDKKYQKPEDKEDSWDDEILTFGAYQPTVASSEGRQSRRQSVSRFL
                     GEGGPDLKGETLSFKQSPPPASSPIHPRKGGADWLGLKDDDLDLLSPSPVQKAQQEDS
                     AMTPSLLPPTNQPSAPEPHSVPTGLPSAAKPPAKGARPSVKASQVSSPKASEEKEDDW
                     LSHVISQKKSQNLAREERTGPSKDLNSPGSRSQIPASSLPIASTQVLEQASAGEASRP
                     TTQGIAAVRPAVTGAPVSWSQATTVVPVDDPKRGTASASGDFSSREPAVYIPHSQEPT
                     GLSVPIQTLLPESMMQSLLPGSGFQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEA
                     QVRKLELERSQHRMLLESLQQRHQADLELIEDAHRSHVKVLETSYQQREEQLRREKEV
                     LSAQHASYCQEAERARTELVAQHQRQMAMAEQEKDQEVARLRELQQASILEMRKDHEH
                     QLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHVTTSQER
                     ELGIRQQDEQLRALQERLGRQQRDMEEERSRLQEVIGKMEVRLSEQSRLLEQERWRVA
                     AEKSKAESAQRTLEEQRKIMVQQVAMEREELERAKSALLEEQKSVMNKCGEERRRLAA
                     EWAEFFTQQKLSKERAEREAERAMHADTQRESTIISLTKEQAELTVRACELRAKEEKL
                     IAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEARQ
                     MQTEQQGRLQVVQRQQEWLRQQEQRVHQARFQSPSCPSGPPLFPPTESLSLVLAQEHL
                     SLAQQRLQLDRVRQEAPSSLPGLPPRAQGPAASSLDAVQAPASTAPQRSQTAAVQMPT
                     HLLAKLLLLKHTAEEDHDFLENEQFFLETLKKAPYNMAYHSA"
ORIGIN      
        1 tccttcccgg cacctcctgt ggttcggccc actactgaac gggcggcaga ctacagttcc
       61 tagaatcctc cactccacct tctatttgag gccggaggcg gcgtggtggg aatgtcgccg
      121 gtgcagaggg aagatgacct tgctgggcaa gagtgcacat gactggacag tgaggagctg
      181 cagaaagccc caaagccagg atggcactga aagccaagaa aggattgaaa ggatccattg
      241 atgacgtcct tggtgacctc ctgggagatg acacagtact gcttgagaag cctgttgaga
      301 cagcgtcaca tgccaaagac acatcgagtt cacctcagtg gctttcctca aaggcaaagt
      361 tcctcccaaa agacagtgct gggggactgg cagcagccga tgctgaggtc ctgtgttttc
      421 acctcccgtg gactcaggtc tccagtgact cggatgcaga cccacaggtc ttcttgcaga
      481 acatgaagga cctggacagc atggacgatg atctctttgg tcggatgaag tctcacccac
      541 cctctggcaa aggaactgca aaggcctctg ggaaagaagt acctagcaag cccaaacctg
      601 ctggcacatt gacagctgat gagaaagggg acgccattcc cactaagaag ccaccaccag
      661 cttccagcag gtttgggctt cagtacaaga agttttcctt tgaagacttt gaggacccgc
      721 tggcggggct tctctctgat gaggaggaag agactgccaa gaagccacct gcaacggaga
      781 gcaaacttgc tcccaagagc cccagcacag ccgcaggcca aggtccttct gttcctctga
      841 ctcctgggga tacacccatc cggaagaaag aacctctctt tgatgaaggg gatgacatca
      901 tgaccaccct gggctttgaa gacagcccca aggcagagag gaagaaggca ggagaccagg
      961 aagggcccct ccctgctcgc tccaagctgg atgaactgct gggtcggggc acagctgcca
     1021 agctcctccc tcgcccaggc actggggaac gcagagagtt caagttagac aagaagtatc
     1081 agaagccaga ggacaaggaa gacagctggg atgacgagat cctcaccttt ggggcttacc
     1141 agcctaccgt ggcctcctct gagggccgac agtcccgcag gcagtcagtc agcaggttct
     1201 tgggagaagg tggcccagac cttaagggag aaaccctaag cttcaaacag agccctccac
     1261 cagcttccag tcctatccac cccaggaaag gaggagccga ctggttaggc cttaaggacg
     1321 atgacctgga cctgctgtct ccctctcctg ttcaaaaggc ccaacaggaa gactcagcca
     1381 tgacaccctc tctcctacct ccaacaaacc agccctcagc cccagagcca cactctgtcc
     1441 caactggact tccctcagca gcaaagccac cagccaaggg tgcaaggccc tctgtcaaag
     1501 ccagccaggt ctcctcaccg aaagcctctg aggagaaaga ggatgactgg ttgagccatg
     1561 tcatatctca gaagaaatcc caaaatctag ccagagaaga gcgtactggg ccctccaagg
     1621 atctgaactc accagggtca cggagtcaga tccctgctag cagccttcct atcgctagca
     1681 ctcaggtcct tgagcaggcc tctgctggag aagcctcaag accaaccaca caaggaattg
     1741 cagctgtcag gcctgctgtc acaggggccc ccgtgagttg gagccaagct accactgttg
     1801 tccctgtaga tgaccccaag agaggaacgg cctctgcctc tggggacttc tctagcagag
     1861 agcctgcagt ttacatcccg cattcccagg aacctaccgg gctctctgtg cctatccaga
     1921 ccctcctccc agagtccatg atgcagagtc tgctgccagg ctcgggattc cagaagcagc
     1981 tcctggcagc ccaagggcag cttcagagca gcactgccca gcttcaggtt gagctgctgc
     2041 agagccagac caagctgtca gagctggagg cccaggtgcg gaagttggag ctggagcgta
     2101 gccagcacag gatgctgctg gagagtttgc agcagcggca ccaggcagac ctggagctca
     2161 ttgaggacgc gcacagaagc catgtcaagg tgctagaaac atcctaccag cagcgggagg
     2221 agcagctccg cagagagaag gaggtgctgt ccgctcagca tgcatcgtac tgccaggaag
     2281 ctgagcgggc caggactgag ctcgtagccc agcaccagcg gcagatggcc atggctgagc
     2341 aggagaagga ccaggaggtt gcacggcttc gggagcttca gcaggcgtcc atcctagaga
     2401 tgcgcaagga ccacgagcac cagctacagc ggctgaaaat gctgaaggac caagagatcg
     2461 atgctgtcac cagtgctacc tcccatactc ggtccctgaa cggcatcatc gagcagatgg
     2521 agaagttttc cagcagcttg aacacgctgt cctcccgtgt ggaggcctcc cacgtcacca
     2581 cctcacagga acgagagttg gggattcggc agcaagatga gcagttgcga gctctgcagg
     2641 agaggctggg ccggcagcaa cgagacatgg aggaagagcg gagcaggcta caggaggtca
     2701 tcgggaagat ggaagtccgc ctgagtgagc agagccggct cctggagcag gaacgctggc
     2761 gggtggctgc tgagaagtcc aaggcagagt cagcccaacg cactctggag gagcagagga
     2821 agatcatggt ccagcaggtt gccatggaga gggaggagct ggagagagcc aagagcgcct
     2881 tgctggagga gcagaagtca gtcatgaata agtgtgggga ggagcggcgg cgcctggcag
     2941 cagagtgggc tgagtttttc acacagcaga agctgagtaa ggagcgggca gagcgcgagg
     3001 ctgagagggc gatgcacgca gacacccagc gagagagcac catcatcagc ctgaccaagg
     3061 agcaggcaga gctgacagtt agggcctgtg agctccgggc caaggaggaa aagctgattg
     3121 ctgagaggga ggctttggag agagagcgcc aagagctccg actagagaag gacaggttgc
     3181 acaaagccag cctgcgcctc caggcccgcg cccaggaggt ggaacacatg agtaaggtag
     3241 cctccaagaa gtatgaggag ggtgagcagg ccttgcagga ggcccggcag atgcagactg
     3301 agcagcaggg ccggctgcag gtggtccaga ggcagcagga gtggctgcgg cagcaggagc
     3361 agcgtgtgca tcaggcaagg ttccagtccc cctcttgtcc ctcaggccca cctttgtttc
     3421 cgcccactga gtctctctcc ttggtgctgg cacaggagca cctgagcctg gcccagcagc
     3481 ggctgcagct ggaccgcgtg cggcaggaag caccttccag ccttccaggg ctgcccccca
     3541 gagcccaggg cccagcagcc tccagcctgg atgctgtcca ggcccctgct tccactgctc
     3601 ctcagcgtag ccagacggct gccgtgcaga tgcccacaca ccttcttgcc aagctgctgc
     3661 tgctgaagca cacagcagag gaggaccatg acttcttgga gaatgaacag ttcttcctgg
     3721 agactctgaa gaaagcgcct tacaatatgg cttaccactc tgcctgaaaa tgcccattgc
     3781 ctcctcggcg agcatctggc cctgcagctc tctcccacgg ccgaccagct cccatgtcca
     3841 tgaaaggctc ctcagaacgt actgcactac ccagggcctg attacaagtt cttgtatgga
     3901 caggg
//
