LOCUS       XM_039087453            4376 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Fas binding factor 1 (Fbf1),
            transcript variant X1, mRNA.
ACCESSION   XM_039087453
VERSION     XM_039087453.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4376
                     /gene="Fbf1"
                     /note="Fas binding factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 17 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
     CDS             636..4238
                     /gene="Fbf1"
                     /codon_start=1
                     /product="fas-binding factor 1 isoform X1"
                     /protein_id="XP_038943381.1"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
                     /translation="MSAAAAFLPRHVKALKAKKGLKGSIDDVLGDLLGDDTVLLEKPV
                     ETASHAKDTSSSPQWLSSKAKFLPKDSAGGLAAADAEVLCFHLPWTQVSSDSDADPQV
                     FLQNMKDLDSMDDDLFGRMKSHPPSGKGTAKASGKEVPSKPKPAGTLTADEKGDAIPT
                     KKPPPASSRFGLQYKKFSFEDFEDPLAGLLSDEEEETAKKPPATESKLAPKSPSTAAG
                     QGPSVPLTPGDTPIRKKEPLFDEGDDIMTTLGFEDSPKAERKKAGDQEGPLPARSKLD
                     ELLGRGTAAKLLPRPGTGERREFKLDKKYQKPEDKEDSWDDEILTFGAYQPTVASSEG
                     RQSRRQSVSRFLGEGGPDLKGETLSFKQSPPPASSPIHPRKGGADWLGLKDDDLDLLS
                     PSPVQKAQQEDSAMTPSLLPPTNQPSAPEPHSVPTGLPSAAKPPAKGARPSVKASQVS
                     SPKASEEKEDDWLSHVISQKKSQNLAREERTGPSKDLNSPGSRSQIPASSLPIASTQV
                     LEQASAGEASRPTTQGIAAVRPAVTGAPVSWSQATTVVPVDDPKRGTASASGDFSSRE
                     PAVYIPHSQEPTGLSVPIQTLLPESMMQSLLPGSGFQKQLLAAQGQLQSSTAQLQVEL
                     LQSQTKLSELEAQVRKLELERSQHRMLLESLQQRHQADLELIEDAHRSHVKVLETSYQ
                     QREEQLRREKEVLSAQHASYCQEAERARTELVAQHQRQMAMAEQEKDQEVARLRELQQ
                     ASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSR
                     VEASHVTTSQERELGIRQQDEQLRALQERLGRQQRDMEEERSRLQEVIGKMEVRLSEQ
                     SRLLEQERWRVAAEKSKAESAQRTLEEQRKIMVQQVAMEREELERAKSALLEEQKSVM
                     NKCGEERRRLAAEWAEFFTQQKLSKERAEREAERAMHADTQRESTIISLTKEQAELTV
                     RACELRAKEEKLIAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKY
                     EEGEQALQEARQMQTEQQGRLQVVQRQQEWLRQQEQRVHQARFQSPSCPSGPPLFPPT
                     ESLSLVLAQEHLSLAQQRLQLDRVRQEAPSSLPGLPPRAQGPAASSLDAVQAPASTAP
                     QRSQTAAVQMPTHLLAKLLLLKHTAEEDHDFLENEQFFLETLKKAPYNMAYHSA"
ORIGIN      
        1 gcccactact gaacgggcgg cagactacag ttcctagaat cctccactcc accttctatt
       61 tgaggccgga ggcggcgtgg tgggaatgtc gccggtgcag aggtggtagg cctggcggat
      121 ccgagcggac tgagtggagt cggaacccgg ggctctggtt gggctgggtt tccgtggctc
      181 tgtttctgaa aggacggctc ttaacagggc cccaaaggac tagggagaag cacggctgta
      241 tctgagttcc gatgggatgg gcgcgcgcgg gatggaacag tgagggggca ccatgcctgg
      301 cctggcgcgg cactcccgga accgctgtgg ctgaggggcg ggttcgcgaa ttttaaaatg
      361 ccttcatgca gttggttgaa tatgtgaaga cgttattctg ggatactttg gcctttacaa
      421 gccgccccta ggaaatgtcc ctccaggtct gggaagctgc gacggaatac ataggagata
      481 gcacaagtta tttggtgtga tgtgagccaa aacgcgtttg gacttgtagg tcgctaaagt
      541 tgccattgca caggagaaac acaagcattc ccctgtgtcc acaaccccag tacactttgc
      601 attttagtaa gaggctaggc acaccaagaa gacagatgag cgccgcagcc gcctttcttc
      661 ctaggcatgt gaaggcactg aaagccaaga aaggattgaa aggatccatt gatgacgtcc
      721 ttggtgacct cctgggagat gacacagtac tgcttgagaa gcctgttgag acagcgtcac
      781 atgccaaaga cacatcgagt tcacctcagt ggctttcctc aaaggcaaag ttcctcccaa
      841 aagacagtgc tgggggactg gcagcagccg atgctgaggt cctgtgtttt cacctcccgt
      901 ggactcaggt ctccagtgac tcggatgcag acccacaggt cttcttgcag aacatgaagg
      961 acctggacag catggacgat gatctctttg gtcggatgaa gtctcaccca ccctctggca
     1021 aaggaactgc aaaggcctct gggaaagaag tacctagcaa gcccaaacct gctggcacat
     1081 tgacagctga tgagaaaggg gacgccattc ccactaagaa gccaccacca gcttccagca
     1141 ggtttgggct tcagtacaag aagttttcct ttgaagactt tgaggacccg ctggcggggc
     1201 ttctctctga tgaggaggaa gagactgcca agaagccacc tgcaacggag agcaaacttg
     1261 ctcccaagag ccccagcaca gccgcaggcc aaggtccttc tgttcctctg actcctgggg
     1321 atacacccat ccggaagaaa gaacctctct ttgatgaagg ggatgacatc atgaccaccc
     1381 tgggctttga agacagcccc aaggcagaga ggaagaaggc aggagaccag gaagggcccc
     1441 tccctgctcg ctccaagctg gatgaactgc tgggtcgggg cacagctgcc aagctcctcc
     1501 ctcgcccagg cactggggaa cgcagagagt tcaagttaga caagaagtat cagaagccag
     1561 aggacaagga agacagctgg gatgacgaga tcctcacctt tggggcttac cagcctaccg
     1621 tggcctcctc tgagggccga cagtcccgca ggcagtcagt cagcaggttc ttgggagaag
     1681 gtggcccaga ccttaaggga gaaaccctaa gcttcaaaca gagccctcca ccagcttcca
     1741 gtcctatcca ccccaggaaa ggaggagccg actggttagg ccttaaggac gatgacctgg
     1801 acctgctgtc tccctctcct gttcaaaagg cccaacagga agactcagcc atgacaccct
     1861 ctctcctacc tccaacaaac cagccctcag ccccagagcc acactctgtc ccaactggac
     1921 ttccctcagc agcaaagcca ccagccaagg gtgcaaggcc ctctgtcaaa gccagccagg
     1981 tctcctcacc gaaagcctct gaggagaaag aggatgactg gttgagccat gtcatatctc
     2041 agaagaaatc ccaaaatcta gccagagaag agcgtactgg gccctccaag gatctgaact
     2101 caccagggtc acggagtcag atccctgcta gcagccttcc tatcgctagc actcaggtcc
     2161 ttgagcaggc ctctgctgga gaagcctcaa gaccaaccac acaaggaatt gcagctgtca
     2221 ggcctgctgt cacaggggcc cccgtgagtt ggagccaagc taccactgtt gtccctgtag
     2281 atgaccccaa gagaggaacg gcctctgcct ctggggactt ctctagcaga gagcctgcag
     2341 tttacatccc gcattcccag gaacctaccg ggctctctgt gcctatccag accctcctcc
     2401 cagagtccat gatgcagagt ctgctgccag gctcgggatt ccagaagcag ctcctggcag
     2461 cccaagggca gcttcagagc agcactgccc agcttcaggt tgagctgctg cagagccaga
     2521 ccaagctgtc agagctggag gcccaggtgc ggaagttgga gctggagcgt agccagcaca
     2581 ggatgctgct ggagagtttg cagcagcggc accaggcaga cctggagctc attgaggacg
     2641 cgcacagaag ccatgtcaag gtgctagaaa catcctacca gcagcgggag gagcagctcc
     2701 gcagagagaa ggaggtgctg tccgctcagc atgcatcgta ctgccaggaa gctgagcggg
     2761 ccaggactga gctcgtagcc cagcaccagc ggcagatggc catggctgag caggagaagg
     2821 accaggaggt tgcacggctt cgggagcttc agcaggcgtc catcctagag atgcgcaagg
     2881 accacgagca ccagctacag cggctgaaaa tgctgaagga ccaagagatc gatgctgtca
     2941 ccagtgctac ctcccatact cggtccctga acggcatcat cgagcagatg gagaagtttt
     3001 ccagcagctt gaacacgctg tcctcccgtg tggaggcctc ccacgtcacc acctcacagg
     3061 aacgagagtt ggggattcgg cagcaagatg agcagttgcg agctctgcag gagaggctgg
     3121 gccggcagca acgagacatg gaggaagagc ggagcaggct acaggaggtc atcgggaaga
     3181 tggaagtccg cctgagtgag cagagccggc tcctggagca ggaacgctgg cgggtggctg
     3241 ctgagaagtc caaggcagag tcagcccaac gcactctgga ggagcagagg aagatcatgg
     3301 tccagcaggt tgccatggag agggaggagc tggagagagc caagagcgcc ttgctggagg
     3361 agcagaagtc agtcatgaat aagtgtgggg aggagcggcg gcgcctggca gcagagtggg
     3421 ctgagttttt cacacagcag aagctgagta aggagcgggc agagcgcgag gctgagaggg
     3481 cgatgcacgc agacacccag cgagagagca ccatcatcag cctgaccaag gagcaggcag
     3541 agctgacagt tagggcctgt gagctccggg ccaaggagga aaagctgatt gctgagaggg
     3601 aggctttgga gagagagcgc caagagctcc gactagagaa ggacaggttg cacaaagcca
     3661 gcctgcgcct ccaggcccgc gcccaggagg tggaacacat gagtaaggta gcctccaaga
     3721 agtatgagga gggtgagcag gccttgcagg aggcccggca gatgcagact gagcagcagg
     3781 gccggctgca ggtggtccag aggcagcagg agtggctgcg gcagcaggag cagcgtgtgc
     3841 atcaggcaag gttccagtcc ccctcttgtc cctcaggccc acctttgttt ccgcccactg
     3901 agtctctctc cttggtgctg gcacaggagc acctgagcct ggcccagcag cggctgcagc
     3961 tggaccgcgt gcggcaggaa gcaccttcca gccttccagg gctgcccccc agagcccagg
     4021 gcccagcagc ctccagcctg gatgctgtcc aggcccctgc ttccactgct cctcagcgta
     4081 gccagacggc tgccgtgcag atgcccacac accttcttgc caagctgctg ctgctgaagc
     4141 acacagcaga ggaggaccat gacttcttgg agaatgaaca gttcttcctg gagactctga
     4201 agaaagcgcc ttacaatatg gcttaccact ctgcctgaaa atgcccattg cctcctcggc
     4261 gagcatctgg ccctgcagct ctctcccacg gccgaccagc tcccatgtcc atgaaaggct
     4321 cctcagaacg tactgcacta cccagggcct gattacaagt tcttgtatgg acaggg
//
