LOCUS       XM_008768413            4339 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Fas binding factor 1 (Fbf1),
            transcript variant X6, mRNA.
ACCESSION   XM_008768413
VERSION     XM_008768413.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008768413.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4339
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4339
                     /gene="Fbf1"
                     /note="Fas binding factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 187 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
     CDS             632..4201
                     /gene="Fbf1"
                     /codon_start=1
                     /product="fas-binding factor 1 isoform X6"
                     /protein_id="XP_008766635.1"
                     /db_xref="GeneID:287836"
                     /db_xref="RGD:1310662"
                     /translation="MSAAAAFLPRHVKALKAKKGLKGSIDDVLGDLLGDDILLEKPVE
                     TASHAKDTSSSPQWLSSKAKFLPKDSAGGLAAADAEVSSDSDADPQVFLQNMKDLDSM
                     DDDLFGRMKSHPPSGKGTAKASGKEVPSKPKPAGTLTADEKGDAIPTKKPPPASSRFG
                     LQYKKFSFEDFEDPLAGLLSDEEEETAKKPPATESKLAPKSPSTAAGQGPSVPLTPGD
                     TPIRKKEPLFDEGDDIMTTLGFEDSPKAERKKAGDQEGPLPARSKLDELLGRGTAAKL
                     LPRPGTGERREFKLDKKYQKPEDKEDSWDDEILTFGAYQPTVASSEGRQSRRQSVSRF
                     LGEGGPDLKGETLSFKQSPPPASSPIHPRKGGADWLGLKDDDLDLLSPSPVQKAQQED
                     SAMTPSLLPPTNQPSAPEPHSVPTGLPSAAKPPAKGARPSVKASQVSSPKASEEKEDD
                     WLSHVISQKKSQNLAREERTGPSKDLNSPGSRSQIPASSLPIASTQVLEQASAGEASR
                     PTTQGIAAVRPAVTGAPVSWSQATTVVPVDDPKRGTASASGDFSSREPAVYIPHSQEP
                     TGLSVPIQTLLPESMMQSLLPGSGFQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELE
                     AQVRKLELERSQHRMLLESLQQRHQADLELIEDAHRSHVKVLETSYQQREEQLRREKE
                     VLSAQHASYCQEAERARTELVAQHQRQMAMAEQEKDQEVARLRELQQASILEMRKDHE
                     HQLQRLKMLKDQEIDAVTSATSHTRSLNGIIEQMEKFSSSLNTLSSRVEASHVTTSQE
                     RELGIRQQDEQLRALQERLGRQQRDMEEERSRLQEVIGKMEVRLSEQSRLLEQERWRV
                     AAEKSKAESAQRTLEEQRKIMVQQVAMEREELERAKSALLEEQKSVMNKCGEERRRLA
                     AEWAEFFTQQKLSKERAEREAERAMHADTQRESTIISLTKEQAELTVRACELRAKEEK
                     LIAEREALERERQELRLEKDRLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAR
                     QMQTEQQGRLQVVQRQQEWLRQQEQRVHQARFQSPSCPSGPPLFPPTESLSLVLAQEH
                     LSLAQQRLQLDRVRQEAPSSLPGLPPRAQGPAASSLDAVQAPASTAPQRSQTAAVQMP
                     THLLAKLLLLKHTAEEDHDFLENEQFFLETLKKAPYNMAYHSA"
ORIGIN      
        1 actactgaac gggcggcaga ctacagttcc tagaatcctc cactccacct tctatttgag
       61 gccggaggcg gcgtggtggg aatgtcgccg gtgcagaggt ggtaggcctg gcggatccga
      121 gcggactgag tggagtcgga acccggggct ctggttgggc tgggtttccg tggctctgtt
      181 tctgaaagga cggctcttaa cagggcccca aaggactagg gagaagcacg gctgtatctg
      241 agttccgatg ggatgggcgc gcgcgggatg gaacagtgag ggggcaccat gcctggcctg
      301 gcgcggcact cccggaaccg ctgtggctga ggggcgggtt cgcgaatttt aaaatgcctt
      361 catgcagttg gttgaatatg tgaagacgtt attctgggat actttggcct ttacaagccg
      421 cccctaggaa atgtccctcc aggtctggga agctgcgacg gaatacatag gagatagcac
      481 aagttatttg gtgtgatgtg agccaaaacg cgtttggact tgtaggtcgc taaagttgcc
      541 attgcacagg agaaacacaa gcattcccct gtgtccacaa ccccagtaca ctttgcattt
      601 tagtaagagg ctaggcacac caagaagaca gatgagcgcc gcagccgcct ttcttcctag
      661 gcatgtgaag gcactgaaag ccaagaaagg attgaaagga tccattgatg acgtccttgg
      721 tgacctcctg ggagatgaca tactgcttga gaagcctgtt gagacagcgt cacatgccaa
      781 agacacatcg agttcacctc agtggctttc ctcaaaggca aagttcctcc caaaagacag
      841 tgctggggga ctggcagcag ccgatgctga ggtctccagt gactcggatg cagacccaca
      901 ggtcttcttg cagaacatga aggacctgga cagcatggac gatgatctct ttggtcggat
      961 gaagtctcac ccaccctctg gcaaaggaac tgcaaaggcc tctgggaaag aagtacctag
     1021 caagcccaaa cctgctggca cattgacagc tgatgagaaa ggggacgcca ttcccactaa
     1081 gaagccacca ccagcttcca gcaggtttgg gcttcagtac aagaagtttt cctttgaaga
     1141 ctttgaggac ccgctggcgg ggcttctctc tgatgaggag gaagagactg ccaagaagcc
     1201 acctgcaacg gagagcaaac ttgctcccaa gagccccagc acagccgcag gccaaggtcc
     1261 ttctgttcct ctgactcctg gggatacacc catccggaag aaagaacctc tctttgatga
     1321 aggggatgac atcatgacca ccctgggctt tgaagacagc cccaaggcag agaggaagaa
     1381 ggcaggagac caggaagggc ccctccctgc tcgctccaag ctggatgaac tgctgggtcg
     1441 gggcacagct gccaagctcc tccctcgccc aggcactggg gaacgcagag agttcaagtt
     1501 agacaagaag tatcagaagc cagaggacaa ggaagacagc tgggatgacg agatcctcac
     1561 ctttggggct taccagccta ccgtggcctc ctctgagggc cgacagtccc gcaggcagtc
     1621 agtcagcagg ttcttgggag aaggtggccc agaccttaag ggagaaaccc taagcttcaa
     1681 acagagccct ccaccagctt ccagtcctat ccaccccagg aaaggaggag ccgactggtt
     1741 aggccttaag gacgatgacc tggacctgct gtctccctct cctgttcaaa aggcccaaca
     1801 ggaagactca gccatgacac cctctctcct acctccaaca aaccagccct cagccccaga
     1861 gccacactct gtcccaactg gacttccctc agcagcaaag ccaccagcca agggtgcaag
     1921 gccctctgtc aaagccagcc aggtctcctc accgaaagcc tctgaggaga aagaggatga
     1981 ctggttgagc catgtcatat ctcagaagaa atcccaaaat ctagccagag aagagcgtac
     2041 tgggccctcc aaggatctga actcaccagg gtcacggagt cagatccctg ctagcagcct
     2101 tcctatcgct agcactcagg tccttgagca ggcctctgct ggagaagcct caagaccaac
     2161 cacacaagga attgcagctg tcaggcctgc tgtcacaggg gcccccgtga gttggagcca
     2221 agctaccact gttgtccctg tagatgaccc caagagagga acggcctctg cctctgggga
     2281 cttctctagc agagagcctg cagtttacat cccgcattcc caggaaccta ccgggctctc
     2341 tgtgcctatc cagaccctcc tcccagagtc catgatgcag agtctgctgc caggctcggg
     2401 attccagaag cagctcctgg cagcccaagg gcagcttcag agcagcactg cccagcttca
     2461 ggttgagctg ctgcagagcc agaccaagct gtcagagctg gaggcccagg tgcggaagtt
     2521 ggagctggag cgtagccagc acaggatgct gctggagagt ttgcagcagc ggcaccaggc
     2581 agacctggag ctcattgagg acgcgcacag aagccatgtc aaggtgctag aaacatccta
     2641 ccagcagcgg gaggagcagc tccgcagaga gaaggaggtg ctgtccgctc agcatgcatc
     2701 gtactgccag gaagctgagc gggccaggac tgagctcgta gcccagcacc agcggcagat
     2761 ggccatggct gagcaggaga aggaccagga ggttgcacgg cttcgggagc ttcagcaggc
     2821 gtccatccta gagatgcgca aggaccacga gcaccagcta cagcggctga aaatgctgaa
     2881 ggaccaagag atcgatgctg tcaccagtgc tacctcccat actcggtccc tgaacggcat
     2941 catcgagcag atggagaagt tttccagcag cttgaacacg ctgtcctccc gtgtggaggc
     3001 ctcccacgtc accacctcac aggaacgaga gttggggatt cggcagcaag atgagcagtt
     3061 gcgagctctg caggagaggc tgggccggca gcaacgagac atggaggaag agcggagcag
     3121 gctacaggag gtcatcggga agatggaagt ccgcctgagt gagcagagcc ggctcctgga
     3181 gcaggaacgc tggcgggtgg ctgctgagaa gtccaaggca gagtcagccc aacgcactct
     3241 ggaggagcag aggaagatca tggtccagca ggttgccatg gagagggagg agctggagag
     3301 agccaagagc gccttgctgg aggagcagaa gtcagtcatg aataagtgtg gggaggagcg
     3361 gcggcgcctg gcagcagagt gggctgagtt tttcacacag cagaagctga gtaaggagcg
     3421 ggcagagcgc gaggctgaga gggcgatgca cgcagacacc cagcgagaga gcaccatcat
     3481 cagcctgacc aaggagcagg cagagctgac agttagggcc tgtgagctcc gggccaagga
     3541 ggaaaagctg attgctgaga gggaggcttt ggagagagag cgccaagagc tccgactaga
     3601 gaaggacagg ttgcacaaag ccagcctgcg cctccaggcc cgcgcccagg aggtggaaca
     3661 catgagtaag gtagcctcca agaagtatga ggagggtgag caggccttgc aggaggcccg
     3721 gcagatgcag actgagcagc agggccggct gcaggtggtc cagaggcagc aggagtggct
     3781 gcggcagcag gagcagcgtg tgcatcaggc aaggttccag tccccctctt gtccctcagg
     3841 cccacctttg tttccgccca ctgagtctct ctccttggtg ctggcacagg agcacctgag
     3901 cctggcccag cagcggctgc agctggaccg cgtgcggcag gaagcacctt ccagccttcc
     3961 agggctgccc cccagagccc agggcccagc agcctccagc ctggatgctg tccaggcccc
     4021 tgcttccact gctcctcagc gtagccagac ggctgccgtg cagatgccca cacaccttct
     4081 tgccaagctg ctgctgctga agcacacagc agaggaggac catgacttct tggagaatga
     4141 acagttcttc ctggagactc tgaagaaagc gccttacaat atggcttacc actctgcctg
     4201 aaaatgccca ttgcctcctc ggcgagcatc tggccctgca gctctctccc acggccgacc
     4261 agctcccatg tccatgaaag gctcctcaga acgtactgca ctacccaggg cctgattaca
     4321 agttcttgta tggacaggg
//
