LOCUS       NM_001271065            1679 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus failed axon connections homolog, metaxin like GST
            domain containing (Faxc), mRNA.
ACCESSION   NM_001271065 XM_001059208 XM_575784
VERSION     NM_001271065.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On or before Aug 31, 2012 this sequence version replaced
            XM_001059208.3, XM_575784.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.853823.1,
                                           SRR22582416.356951.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-448               JAXUCZ010000005.1  40277167-40277614
            449-584             JAXUCZ010000005.1  40282610-40282745
            585-781             JAXUCZ010000005.1  40295345-40295541
            782-1005            JAXUCZ010000005.1  40306754-40306977
            1006-1122           JAXUCZ010000005.1  40327675-40327791
            1123-1679           JAXUCZ010000005.1  40335947-40336503
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..1679
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /note="failed axon connections homolog, metaxin like GST
                     domain containing"
                     /db_xref="GeneID:366333"
                     /db_xref="RGD:1562449"
     exon            1..448
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
     CDS             183..1412
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /codon_start=1
                     /product="failed axon connections homolog"
                     /protein_id="NP_001257994.1"
                     /db_xref="GeneID:366333"
                     /db_xref="RGD:1562449"
                     /translation="MHWGVGFASSRPCVVDLSWNQSISFFGWWAGSEEPFSFYGDIIA
                     FPLQDYGGIMAGLGSDPWWKKTLYLTGGALLAAAAYLLHELLVIRKQQELDSKDAIIL
                     HQFARPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIEYNNEKVSGT
                     EFIIDFLEEKLGVNLNKNLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKML
                     SLSGGGPFSNLLRWVVCHITKGIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGD
                     KKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKFWPEW
                     HHDDDNTIYESEESSEGSKTHTPMLDFSFYSRTETFEDEGAENSFSRTPDTDFTGHSL
                     FDSDVDMDDYTEHEQCK"
     exon            449..584
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
     exon            585..781
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
     exon            782..1005
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
     exon            1006..1122
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
     exon            1123..1679
                     /gene="Faxc"
                     /gene_synonym="RGD1562449"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgctgcctc gccgggcctc agggccccgt cagcccggct ctccgctcgc caccggcgcc
       61 cttccactac cgcctccgcc tgcgccccct gcgcaccgtt gagcccgcct gcccgggcgc
      121 cggccccttc ccatgcgggc ggcgcgggcc ctgggagggg cgcccggagc cagccgcgca
      181 gcatgcactg gggggttggc tttgcctcgt ccaggccgtg cgtggtggac ctgagctgga
      241 accagagcat ctccttcttc ggctggtggg ccgggtccga ggagcccttc tccttttatg
      301 gggacatcat cgctttccct ttgcaggatt acggtgggat catggcaggg ctgggctcgg
      361 atccctggtg gaagaaaacc ctttatttga ccgggggagc tttgctggcc gcggctgcgt
      421 atctgctcca cgaactcctg gtcattagga agcagcaaga gctcgactcc aaagacgcca
      481 ttattttgca tcagtttgca agacctaaca atggtgtccc cagcttgtct cctttctgtt
      541 tgaaaatgga aacttactta agaatggccg accttcccta tcagaactat tttggtggaa
      601 aactctctgc tcaagggaaa atgccttgga ttgaatataa taatgaaaaa gtgtctggca
      661 cagaattcat aatcgacttt ctggaagaga aacttggagt gaacttaaac aaaaaccttg
      721 gcccccatga aagagctgtc tcaagagctg tgaccaagat ggtggaagag cacttttact
      781 ggacattagc ttattgccag tgggtggaca atctcaatga gacccggaag atgctgtcac
      841 ttagtggtgg tggtcccttc agtaacctgc tcaggtgggt cgtgtgccac ataacaaaag
      901 gaattgtgaa gcgggagatg cacggccacg gcattggccg cttctcggag gaagagattt
      961 acatgctgat ggagaaggac atgcggtctt tagcagggct tttgggtgac aagaagtaca
     1021 tcatggggcc caagctttcc actcttgatg ccactgtctt tggacacttg gcacaggcga
     1081 tgtggacctt gccagggaca agaccggagc ggctaatcaa aggtgagctg atcaaccttg
     1141 ccatgtactg cgagaggatc aggaggaaat tctggcccga atggcaccat gacgatgaca
     1201 acaccatcta tgagtctgag gagagcagcg agggcagcaa gactcacaca cctatgctgg
     1261 attttagctt ttactcaagg acagagacct ttgaagatga gggggctgag aacagttttt
     1321 ccaggacccc agacacggat ttcaccggac attctctctt tgactctgac gtggacatgg
     1381 atgactacac agaacacgaa cagtgcaaat gatgccccat catggaccat cttcctcagg
     1441 agtcagcatt ccctggggtc ggtctggttt cccagataga aatccatctg agctgggagg
     1501 agatcttcaa gcctggccca gtttcaacat accaactgga ctataaaccg ccttatttcc
     1561 ttctttcttt ctttctttct ttctttcttt ctttcttttt tttttttttg tacaaacaga
     1621 aatacagaac cattcagatg gctccgtcta aaacagacaa aacaaatatc agcatggta
//
