LOCUS       NM_001004252            2184 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus phenylalanyl-tRNA synthetase subunit beta
            (Farsb), mRNA.
ACCESSION   NM_001004252 XM_217455
VERSION     NM_001004252.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Finarov I, Moor N, Kessler N, Klipcan L and Safro MG.
  TITLE     Structure of human cytosolic phenylalanyl-tRNA synthetase: evidence
            for kingdom-specific design of the active sites and tRNA binding
            patterns
  JOURNAL   Structure 18 (3), 343-353 (2010)
   PUBMED   20223217
REFERENCE   2  (bases 1 to 2184)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079364.1.
            
            On Sep 10, 2004 this sequence version replaced XM_217455.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079364.1, SRR8487231.49801.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q33"
     gene            1..2184
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /note="phenylalanyl-tRNA synthetase subunit beta"
                     /db_xref="GeneID:301544"
                     /db_xref="RGD:1303210"
     exon            1..67
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     CDS             10..1779
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /EC_number="6.1.1.20"
                     /note="phenylalanyl-tRNA synthetase beta chain;
                     phenylalanine-tRNA synthetase-like, beta subunit;
                     phenylalanyl-tRNA synthetase, beta subunit"
                     /codon_start=1
                     /product="phenylalanine--tRNA ligase beta subunit"
                     /protein_id="NP_001004252.1"
                     /db_xref="GeneID:301544"
                     /db_xref="RGD:1303210"
                     /translation="MPTVSVKRDLLFQVLGRTYTDEEFDELCFEFGLELDEITSEKQI
                     ISKEQGNVKAQGASDVVLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPK
                     GEIQKLIITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIG
                     THDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKP
                     LYPVIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTDLTKAKIVLDIIVTMFSE
                     YCENQFTVEAAEVVSPSGKSSTLPELPYRKEMVRADLINKKVGIKETPANLAKLLTRM
                     CLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFP
                     LNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLNISATKAVHIGNPKTAEFQVA
                     RTTLLPGLLKTIAANRKMPLPLKLFEISDIVVQDPSKDVGAKNYRHLCAVYYNKNPGF
                     EIIHGLLDRIMQLLDVPPGEESGGYVIKASAGSAFFPGRCAEIFVGGQSIGKLGVLHP
                     DVITKFELTMPCSSLEINIEPFL"
     exon            68..123
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            124..278
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            279..348
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            349..464
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            465..615
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            616..724
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            725..795
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            796..857
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            858..909
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            910..971
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1179
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1260
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            1261..1353
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..1471
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            1472..1627
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
     exon            1628..2161
                     /gene="Farsb"
                     /gene_synonym="Farslb"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgactcacca tgccgactgt cagcgtgaag cgagacctgc tcttccaagt cctgggccgg
       61 acctacactg atgaagaatt tgatgaactg tgttttgaat ttggtctgga acttgatgaa
      121 attacttctg agaagcaaat cataagcaag gaacaaggta atgtgaaagc acagggggcc
      181 tcagatgtcg tgctctacaa gattgatgtc cctgccaaca gatacgatct cctgtgtctg
      241 gaaggattgg ctcggggact ccaagtcttc aaagaaagga taaaagctcc agtatataaa
      301 cgagtaatgc ctaagggaga aatccaaaaa ctgattatca cagaagagac agctaaagta
      361 cgcccttttg ctgtagcagc agttctccgg aatatcaagt tcactaaaga ccgatatgac
      421 agctttattg aacttcaaga gaaactacac cagaatattt gcaggaaaag agcattggtt
      481 gctattggca ctcacgactt ggacacttta tcaggcccat ttacttacac tgcaaaacgc
      541 ccttcagata tcaaattcaa gcctctgaat aagaccaagg agtatacagc ctgtgaatta
      601 atgaacatat acaagactga caatcacctt aaacactatt tacatatcat tgaaagtaag
      661 cccctgtatc cagttatcta tgacagcaat ggagtggtcc tctcgatgcc tccgattata
      721 aatgggaatc attcaaaaat aacagtaaat actaggaata tatttattga atgcacaggg
      781 actgacttaa ctaaggcaaa aatcgtgctt gacattattg tcaccatgtt cagtgaatac
      841 tgtgaaaatc agtttacagt agaagcagct gaagtagttt ctcctagtgg aaaatcgagt
      901 acccttccag agctgcccta cagaaaggag atggtgagag ctgatctgat taataagaaa
      961 gttggaatca aagagactcc tgcaaatctt gccaaactcc tgaccaggat gtgtctgaag
     1021 tcagaagtca taggtgatgg caatcagatt gaggttgaaa tccctccgac cagagccgat
     1081 gtcatccatg cgtgtgacat tgtggaggac gcagctattg cttatggtta taacaacatt
     1141 cagatgactc tcccgaaaac atacaccata gctaatcaat ttcctctcaa caaactcaca
     1201 gagctcctca gacttgacat ggctgccgct ggcttcaccg aagcactgac ttttgctctg
     1261 tgttcccaag aagatattgc tgataagctt ggcttgaaca tctctgcaac aaaggcagtc
     1321 cacataggta accccaaaac cgctgagttc caggtggcgc gcactaccct tcttcctggc
     1381 cttctgaaga ccattgcagc aaaccggaag atgccccttc ctctcaagct gttcgagatc
     1441 tctgacatcg tagtccagga tcctagcaaa gatgtaggcg caaaaaacta caggcatctc
     1501 tgtgctgttt attacaacaa gaatcctggg tttgagatca tccatggact gctggacaga
     1561 attatgcagc tgctcgatgt gcctcccggt gaggaaagtg ggggctacgt gatcaaagcc
     1621 tccgcaggtt ctgcattctt ccctggacgg tgtgccgaga tctttgtcgg gggtcaaagt
     1681 atcgggaagc taggcgtcct tcatcccgat gttattacca aatttgagct gaccatgccc
     1741 tgttcctctc tggaaatcaa tattgagccc tttctgtgaa gttggtctct gctgtgtggt
     1801 tctgtctgta ggtgtccctt tctgctcctg tggtatcctt cagccccctt ttacagggca
     1861 catccatttg tgcattaatg tttaataaag tgaaatgtgc tctctggctc cttgcgcagc
     1921 ggcagtaggc cagcttgtgg aagagccgtg tgtttctgta tgtaccacac tggggagagg
     1981 tgccctggac gggcagggtg agtcctggaa gtgcaagctt cgcttggcct tcagagtgtc
     2041 agttacttat gactcctgca cagaaggaaa cagctcatca agtagaacac atgttgcaca
     2101 tgtttaagcc ttttctatac ctgataagtg ataatcaata aaatcattaa tttaggaaaa
     2161 aaaaaaaaaa aaaaaaaaaa aaaa
//
