LOCUS       XM_039110976            4663 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus FA complementation group G (Fancg),
            transcript variant X1, mRNA.
ACCESSION   XM_039110976
VERSION     XM_039110976.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 31, 2024 this sequence was replaced by
            NM_001427606.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4663
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4663
                     /gene="Fancg"
                     /note="FA complementation group G; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 3 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 93 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:691105"
                     /db_xref="RGD:1587477"
     CDS             584..2461
                     /gene="Fancg"
                     /codon_start=1
                     /product="Fanconi anemia group G protein isoform X1"
                     /protein_id="XP_038966904.1"
                     /db_xref="GeneID:691105"
                     /db_xref="RGD:1587477"
                     /translation="MSSQIIPSLPKTFSSSLDLWREKNDQLVRQAKQLTRDSRPSLRR
                     QQSVQDTLEGFRELLLTLQGLPAAVPALPLELTVTCNYIILRASLAQGFTEDLTEDVQ
                     RGLERVLEAQHQMGSKSQQGLKELWHSVLSAPSLLPELLPALHCLASLHAALWMSTNH
                     LGDLTSLLQTLNGSQTETSEDLLPLLKSWSPPVEKLHAPLILQDAESLKDVLLTAFAC
                     RQGFQELITGSLPHAQSSLQEAASGLCPPSVLVQVYTALGTCLRKMGSPQRALLYLTE
                     ALKVGTTCALPLLEASRVYRQLGDTAAELESLQLLVEALSATHSSETFTRLIEVELLL
                     PQPDPASPLHCGTQSQAKHLLASRCLQTGRAEAAAEHYLDLLAMLLDGSEPRSSPPTS
                     ALGPCMPELCLEAAAALIQAGRASDALTVCVELLSRTSSLLPKMPSLWENASKRTKEL
                     PYCPIWASATHLLQGQAWSQLKAQKEALSEFSQCLELLFRALPKDKEQGAGSNCEQKC
                     MSDVSLKQLRVAALISRGLEWVAIGQDTKALSDFLLSVQICPGNRDGSFYLLQTLKRL
                     DRKNEASAFWREAQSQLPQEEAARCLPLYLETCLNWIHPPNCEAFFEEFGTAVLESCD
                     L"
ORIGIN      
        1 tgaggaatct tccttgggcg ttctctacag tactacaact cccagcagac agcgcgcggt
       61 ccgtcttcca gccaggaggg ggaaacctgg actgccgtta gttctaaggc ggagcgcagc
      121 cagagactgg tgcgaagacc cactcctcct aaagtagcct caatactctg gcctccgcgg
      181 aggctccgca aacttaacag ttcgtccctg gtatctggtt ggcctcttgt ctcctcacct
      241 cgttgttccg gttcgtccct ggtatctggc tggcctcttg tctcctcacc tcgttgttcc
      301 gggtttcttt tcagtttccc gcggaacagt ctcttgaaga caaccaaccg cggccgagag
      361 tgttgcagtc tggccaacca caggcgcggt gggcggtggc cgggaccgag tgttgggctt
      421 caggctaagg agagacaacc tggccgcgtt gtctggctcc tctggccgag gagcgtccgg
      481 cgtagtgcag aagtagtttc ttgcgattag ggtgaaggca ccggtgggac cagcctccac
      541 ccatcggaag accccttcgt aacggtgatc tacctcggcg acaatgtcca gccagatcat
      601 tccatccctc cccaaaacat tttccagtag cctggacttg tggagggaaa agaatgacca
      661 gctcgttaga caggctaagc agctgactag ggattctcgt ccgtctctga ggcgacagca
      721 atcagtccaa gacacactgg aagggtttag ggagctcctc ctcactcttc aaggcctccc
      781 tgctgctgtt cctgctctgc ccttggagct gactgtcacc tgtaattata taatcctgag
      841 ggccagcctg gcccagggtt tcactgaaga ccttactgaa gatgttcaaa ggggcctaga
      901 aagagtgctg gaggcccagc atcagatggg gtccaagtct cagcagggac tcaaggagct
      961 gtggcactct gtcctctctg ctccctccct tctgccggag ctgctgcctg ccttacactg
     1021 cctggccagc cttcacgctg ccctctggat gagtaccaat cacctcgggg acctgacctc
     1081 actgctgcaa accctaaatg gcagccagac tgagacctct gaggacctgc taccattgct
     1141 aaaatcctgg agtcctccag ttgagaagct acacgctcca ctgattctgc aggatgcgga
     1201 gagtttaaag gatgtccttc tgacagcatt tgcctgccga caaggcttcc aggagctaat
     1261 cacagggagc ctaccccatg cacagagcag cctgcaggaa gcagcctcag gtctgtgtcc
     1321 gccatcggtg ttagtccagg tgtacacggc gctggggacg tgtctccgta agatgggaag
     1381 tccacagaga gcactgttgt acttgactga agccttgaaa gtgggaacga cctgtgccct
     1441 tccgcttctg gaagcttcca gagtatatag gcaactggga gacacagcag cagagctgga
     1501 gagcctgcag ctactggttg aggccttgag tgccacccat agttctgaaa cattcacacg
     1561 tctcattgaa gtagaattgc tacttccaca acctgaccca gcctctcctc tccattgtgg
     1621 cacacagagc caggccaagc acctgctagc aagtcgatgc ctacagacgg ggagggcaga
     1681 agcagctgcg gagcattacc tggacctgct ggcaatgttg ctggacggct cagagcctag
     1741 gtcctcccca cccacctccg ctctagggcc ctgtatgccg gagctatgtc tggaggcagc
     1801 agcagcattg atccaggcag gccgagcctc agacgctttg actgtgtgtg tggagctact
     1861 cagccgtacc tcatctctgc ttcccaagat gccctccttg tgggaaaatg ccagcaaaag
     1921 aaccaaagaa ctgccatatt gcccaatctg ggcctctgcc actcacttgc ttcagggcca
     1981 ggcctggtca caactaaagg ctcaaaaaga ggcacttagt gaatttagcc agtgccttga
     2041 gctgctcttt cgggccctgc ctaaggacaa agagcaagga gcaggctcca actgtgagca
     2101 gaaatgcatg tctgatgtgt cactgaaaca acttcgagtg gctgctctga ttagccgtgg
     2161 actggaatgg gtagccattg gccaggatac caaagcctta agtgacttcc tcctcagtgt
     2221 gcagatatgc ccaggcaata gagatggttc cttttacctg cttcagactc tgaaaagatt
     2281 ggatcggaag aatgaggcct ctgctttctg gcgggaggcc caaagtcagc tgccacagga
     2341 agaagctgcc aggtgtcttc cactgtattt agaaacctgt ttgaactgga tccatcctcc
     2401 taactgtgaa gccttttttg aggagtttgg gactgcggtg ttggagtctt gtgaccttta
     2461 gcttctttgt ttccaggagc ttgaactttg gcctctgtgg actctccttg gggagggttt
     2521 tgttttttgt attttcgttt attttttttc tgccttatct tctttggaga atggctggaa
     2581 ctgattgtct ctaagtaagt ccttcactca tgagactggt cctgtgaacc ttgatctact
     2641 tactaccagt ctagttccat gaacaaatca ttgtctgttc atggtagttt ccttccttcc
     2701 ttccttcctt cctccctccc tccctccttc ccgctccccc tctccctgtt ttccttcctt
     2761 ccttcctccc tccctccctc cctctctcct tccctccctc cctccctccc tccctccccc
     2821 tctccctccc tccctccccc tctccctgtt ttccttcctt ccttccttcc ttccttcctt
     2881 ccttccttcc ttccttcctt cctctctctc tctctctttg tgttgaggaa aatcttatat
     2941 ttatgtctta tctgcccact gcacacggtt gaatggaagg caggctcagg tgaactagtt
     3001 gggtattggc catctaagat gctcaatttc ctatctctgt cttctgcctg ccttccctgt
     3061 ctccctaatt cccctctctc tggtaggttg gcttctgggg actaaacttc agttcctcat
     3121 ataagtcccc attccctgcc ttttaccccc tttaccatct atcacagagc ttgaggtatg
     3181 agtcggaaga aaaggctaca ttaatccttc cggagaagca gtggcttagt cctttttaag
     3241 ttattattaa agttttgaat tgcttatttt aagttgtatg tgtgtgtgtg cctttggagg
     3301 ccagaggtgt taggttctta gagttatagt tacaggcggt tgtgaaccac ctgacatggg
     3361 tactgggaat ccaacctgtg ttctctggaa gagcaattaa acactcttaa cctgagtcat
     3421 ctctctagct ctgctatcta aaagcacagc ccaaagccca ggaatctgtg ctagatgaca
     3481 gggaacaaag ttaggtctgc agagtgatct tgacaagact cctgttttaa acttttcttt
     3541 tttttttttc tggagctggg gaccgaaccc agggccttgt gcttgttagg caagcgctct
     3601 accactgagc taaatcccca accttgacaa gactcttaag gatgaacagt agtacttgat
     3661 acttgaggag gtggggacat gtggtacaca gctttaattc cagcactcta cagaataagt
     3721 tccagaatag ccagggctat gtagagaggc cctgtctcaa atcaaaacaa aagtggggtt
     3781 ggagggagga gtggtgaaga tgtgtctcag agtaattcca tctctagaaa cagtcagtct
     3841 caggtcagtc tgtgtgggta ggaggtgaag ggtgaattga gtcaggatgc cacccagagc
     3901 caacagtctt ttgactataa tgaaagccag ttaattgtct tttggggcac agggacctta
     3961 aatcacagca catggttgat ctttcttgct cttgggcact actacgtttg ctatgtgttc
     4021 tgcagttgtc cttgactttc ttgaacctca gtgcgctccc tctccagata atatttatac
     4081 tctgtgttaa ggagtacaga ctcccaaacc ctgaggaatc acaaagcctg catcattaga
     4141 agagagtgca atggcaatcg agtggattaa gagctggggt gctgattcag aactctaggg
     4201 ttcagagagg agggggtggg gtggagctag gagtctccat tttctttttt tctttcttcc
     4261 ttacttccct cccttcctcc ctttcttcct tccttccttc cctccctccc tcccttcctt
     4321 ccttccttcc ttccttcctt ccttccttcc ttccttcctt ccttcctccc tcccttcctt
     4381 cctcccttcc ttccttcctt ccgttctttt ttgtagacca gagtccagct atgcagcatt
     4441 agctggcttc aaactgtcaa tctcctgcct ttagcctctg gagtactgag atctagggtg
     4501 tacaccacca tacccacttg tttttgcttg ttttaaaatt ttatttactt agttttgagt
     4561 atcatttggc tggctggaac tcttttttat aggccaggct gacttaaaac tcacagagag
     4621 ccgcctgcct ccgaagtgct gacattaaat gcatgtacta cca
//
