LOCUS       XM_017602427            1039 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 9,
            member C (Fam9c), transcript variant X1, mRNA.
ACCESSION   XM_017602427
VERSION     XM_017602427.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017602427.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1039
                     /gene="Fam9c"
                     /note="family with sequence similarity 9, member C;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100912289"
                     /db_xref="RGD:6487554"
     CDS             255..965
                     /gene="Fam9c"
                     /codon_start=1
                     /product="uncharacterized protein Fam9c isoform X1"
                     /protein_id="XP_017457916.1"
                     /db_xref="GeneID:100912289"
                     /db_xref="RGD:6487554"
                     /translation="MPYKGKKATSKTAKRPRESSDSQSDDDVVHHNFPPRPAEKHVIE
                     ISDEDSSSSDQDDQQARGSALKMTRELHGDPKKSHLAKRKQYCQDVKTSIDTLNEKLV
                     RIFKTQQRERKMLRSKYSKMFEPLFQQWEKDVMKVGQEEDSFVNSSNQRAGTMYNAMM
                     AQRATIDEAKTVSDQFLKNVQVLEDEQKVLDAIEQNKLENEMQSLKKKLATENQQQDL
                     AAIESCLHSLFSEDNEED"
ORIGIN      
        1 cctcgccccc caacagccat ttgaacgaat ctttgaacaa atcattgtct ttgaattgca
       61 tcaccgcagg ttctctgtca acagcagtag tctgggttta gaaattggtg ttataagcct
      121 tgtctttcag gtgcacctgg gaaaagaatt ctgcacaagg caccacaggc tgcctgagga
      181 gagagaggcc ggaaagggaa tgtggtagga gctgttcact aggggttagg gctcaaacct
      241 tcgcacaaga agacatgcca tacaagggga agaaggctac aagcaaaact gcgaagcgcc
      301 cgagggagtc ttcggattct caatctgatg atgatgttgt ccatcacaat tttcccccca
      361 gaccagcaga aaagcatgtg attgagatca gtgatgagga cagttcttca tcagaccaag
      421 acgatcagca ggcaaggggg tctgctctga agatgacacg agaacttcac ggtgacccta
      481 aaaagtctca ccttgcaaag agaaaacagt attgccaaga tgtaaaaact tctatcgaca
      541 ccctgaatga aaagcttgtg cgtattttta aaacacaaca aagggaaagg aagatgcttc
      601 gttccaaata ttctaagatg tttgagcctt tgttccaaca atgggaaaag gatgtgatga
      661 aagtcggaca agaagaagac agttttgtta attcatccaa ccaacgtgca gggactatgt
      721 acaatgctat gatggcgcag agagcgacca ttgatgaagc aaaaactgta tctgatcagt
      781 ttctaaagaa tgtccaagtc cttgaggatg agcaaaaagt tcttgatgct attgagcaaa
      841 acaaattgga aaatgaaatg caaagcctga agaagaaact tgcgacagaa aatcaacaac
      901 aggacttggc agctatcgaa tcatgtcttc attctttgtt ctccgaggat aatgaagaag
      961 attagctgtg atcatgtcat gtgacatgca caaaacatgc cttacactac caaaaattat
     1021 aatataaatt ggcccatca
//
