LOCUS       XM_008771792            1419 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 95
            member C (Fam95c), mRNA.
ACCESSION   XM_008771792
VERSION     XM_008771792.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008771792.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-68                JACYVU010000293.1  11721884-11721951   c
            69-228              JACYVU010000293.1  11711537-11711696   c
            229-287             JACYVU010000293.1  11700766-11700824   c
            288-387             JACYVU010000293.1  11700265-11700364   c
            388-599             JACYVU010000293.1  11697527-11697738   c
            600-810             JACYVU010000293.1  11688873-11689083   c
            811-923             JACYVU010000293.1  11688525-11688637   c
            924-1053            JACYVU010000293.1  11686115-11686244   c
            1054-1251           JACYVU010000293.1  11682052-11682249   c
            1252-1252           "N"                1-1
            1253-1419           JACYVU010000293.1  11681885-11682051   c
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1419
                     /gene="Fam95c"
                     /note="family with sequence similarity 95 member C; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: inserted 1 base in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:103690053"
                     /db_xref="RGD:9147085"
     CDS             82..1368
                     /gene="Fam95c"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: ankyrin repeat
                     domain-containing protein 26-like"
                     /protein_id="XP_008770014.3"
                     /db_xref="GeneID:103690053"
                     /db_xref="RGD:9147085"
                     /translation="MEKTTINERLPCGNKEDSRTERQRYLQKLDVTHPGIYSWIEIEA
                     KTWDELRESLAMLKAAKKMRCRIQRLELENSNLVVTIEKQAREMEALGEKLLNTGNDV
                     VEAAPEGDPVEPREEAVAAPWSQMELMELTSELTKMRMQEDSCKTEVQKYKELYLQEL
                     RSNNALLSRLQNRTCKCPEQSCSNHEGEMRWKTSSMVALVGPHPECPQVPYLTGSSME
                     PQGNVPQPSQCPGASCEFMENARGCSEDTEKVRHKLISSVRSLLCALHQETRRTKELQ
                     KELAKMKKIFNMAPREGHGHEGRGHSFHEVSKVSRAKMGVPVAMLRLEGEAAAADNLV
                     CARETPRASFLTQMELEMKRIESAIAEVNTQECLVKKELDVIKQLYRGELEHIDSVXI
                     GADRVNGGEPRQEDPGPHRGSTVAENPAHDHCKPLE"
ORIGIN      
        1 aagggcaaag ctcccttctt ccctgtcctt atagaggctt ccaacagaag gtgtgacgct
       61 gatcagagat ttgcctcaca aatggagaag actacgataa atgagcggtt gccttgtgga
      121 aacaaggaag actcgagaac tgaaagacag aggtaccttc agaagcttga tgtgacacac
      181 cctgggatct attcatggat agaaattgag gcaaaaactt gggatgagtt gcgagaatca
      241 ttagcgatgc taaaagcggc caagaaaatg cgttgtagga ttcaaaggct cgaacttgaa
      301 aattccaact tagtcgtcac aattgaaaaa caagcgagag aaatggaagc gcttggtgaa
      361 aaactgttaa acacaggaaa cgacgtggtg gaagcggcac cggaaggaga cccggtggag
      421 ccgagggagg aggctgttgc tgcaccctgg agtcagatgg agttgatgga gctcacatct
      481 gagctcacga aaatgagaat gcaagaggac tcttgtaaaa cggaagttca aaaatacaag
      541 gaactctatc tacaagaact aagaagcaat aatgccttac tctcacgtct tcaaaatagg
      601 acttgcaagt gtccagagca gtcatgttca aatcatgagg gggagatgcg gtggaagaca
      661 tcttcaatgg tggctcttgt agggccccac cccgagtgcc ctcaagtgcc atatctaaca
      721 ggcagcagca tggagccaca aggaaatgtg ccccagccct cccaatgccc aggagctagc
      781 tgtgaattca tggaaaatgc taggggctgc tctgaagata cggagaaagt gaggcataaa
      841 ctgataagct cagtgcgttc tttactctgt gctttgcatc aagaaaccag gaggactaaa
      901 gagctacaaa aagagcttgc caaaatgaag aagatcttta acatggcccc ccgggaagga
      961 catgggcatg aaggccgagg acatagtttt catgaggttt caaaagtcag ccgagccaaa
     1021 atgggtgttc cagttgccat gctaagactc gagggagaag cggcagctgc agacaactta
     1081 gtgtgtgctc gcgagactcc acgtgcttcc ttcctaaccc agatggagct tgaaatgaaa
     1141 aggatcgaat ctgctatcgc cgaagtgaac acccaggaat gcttggttaa aaaagagctg
     1201 gacgtaatta agcagctgta ccgaggagag ttagaacaca tagacagcgt gntcattgga
     1261 gcagaccgtg taaatggagg ggagccacgg caggaggacc ctgggcctca ccgcggaagc
     1321 acagtcgcag agaacccagc tcatgatcat tgtaaaccgc tagagtaacg gaacagtgta
     1381 aatctggaaa atatgttgat aaatgagcgt cctctaaaa
//
