LOCUS       NM_001305175            3792 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 8, member A1
            (Fam8a1), mRNA.
ACCESSION   NM_001305175 XM_001058608 XM_214446
VERSION     NM_001305175.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On or before Feb 27, 2015 this sequence version replaced
            XM_214446.7, XM_001058608.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643287.33590.1,
                                           SRR26643429.52006.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840105,
                                           SAMN12840106 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-726               JAXUCZ010000017.1  18240978-18241703   c
            727-847             JAXUCZ010000017.1  18239864-18239984   c
            848-971             JAXUCZ010000017.1  18237769-18237892   c
            972-1111            JAXUCZ010000017.1  18236766-18236905   c
            1112-3792           JAXUCZ010000017.1  18232834-18235514   c
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..3792
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /note="family with sequence similarity 8, member A1"
                     /db_xref="GeneID:291031"
                     /db_xref="RGD:1307845"
     exon            1..726
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /inference="alignment:Splign:2.1.0"
     CDS             102..1256
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /note="RNA binding motif protein 24"
                     /codon_start=1
                     /product="protein FAM8A1"
                     /protein_id="NP_001292104.1"
                     /db_xref="GeneID:291031"
                     /db_xref="RGD:1307845"
                     /translation="MAEGPEEARSRPPGQDGGSEDHEPVPSGPGSPSSSSAAAPRPPA
                     LTTVASAVPEPEPQCELRKRRETGAEPQEPGGCEASDGPGRLSAREYSRQVHEWLWQS
                     YCGYLTWHSGLAALPAYCGPPPAAPQPAAPPPPPPPPQLAYYNPFYFLSAAAPGPGAA
                     TSAGATPTAVAGLTARAPHVQASARAVPVTRVGSAAPARTASDTGRQAGREYVIPSLA
                     HRFMAEMVDFFILFFIKATIVLSIMHLSGIKDISKFAMHYIIEEIDEDTSMEDLQKMM
                     IVALIYRLLVCFYEIICIWGAGGATPGKFLLGLRVVTCDTSVLIAPSRVLVIPSSNVS
                     ITTSTIRALIKNFSIASFFPAFITLLFFQHNRTAYDIVAGTIVVKRNGVR"
     exon            727..847
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /inference="alignment:Splign:2.1.0"
     exon            848..971
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1111
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..3792
                     /gene="Fam8a1"
                     /gene_synonym="Rbm24"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgctgctg ctgtggtggc gaccgagcgg ttggggaggg gctgacgaga gcgggcgacg
       61 gcgcagtgac aggcggcgcg gagggtgcct ccggggcgac gatggcagag gggcccgagg
      121 aagcccggag ccgccctccc gggcaggacg gcggtagcga ggaccacgag ccggtccctt
      181 ccggaccagg ctctccctcc tcctcctccg ccgccgcccc ccggcccccg gctctcacga
      241 ccgtcgcctc ggcggtgccg gagccggagc cgcagtgcga gctccggaag cgccgggaga
      301 cgggcgcaga gcctcaggag ccggggggct gcgaggcgtc ggacgggccg gggcggctga
      361 gcgcgcgcga gtactcgcgg caggtgcacg aatggctgtg gcaatcctac tgcggctacc
      421 tcacctggca cagcggcctg gccgccctcc ccgcctactg cggcccgcct cccgccgccc
      481 ctcagcccgc agccccgccg ccgcccccgc cgccgccgca gctcgcttac tacaacccct
      541 tctacttcct aagcgctgcg gcgccagggc cgggggcggc cacgagcgcc ggcgccaccc
      601 cgacagccgt cgcgggcctg acggcccggg ccccgcacgt gcaggcatct gcccgggcgg
      661 tccctgtgac cagggtgggc tctgcagccc ctgcacggac ggcgagcgac accgggcggc
      721 aggcaggtag agagtatgtc attccatcct tggcccacag atttatggca gagatggtgg
      781 atttctttat tctcttcttt ataaaagcga ccattgtcct gagcatcatg catctcagtg
      841 ggataaagga catctctaag tttgccatgc actatataat agaagagatt gatgaagaca
      901 catcaatgga agacctgcag aaaatgatga ttgtggcact tatatacagg ttgttagttt
      961 gtttctatga gataatttgc atttggggag cagggggagc taccccaggg aagttcctgc
     1021 tagggcttcg agttgtgaca tgtgacacat cagtactcat tgctccaagt cgggttttag
     1081 tgattccttc ctcaaatgtt agcatcacaa cgtccaccat tcgagctttg atcaagaatt
     1141 tttctattgc ttcttttttc cctgctttca tcacattgct gttttttcag cataatcgaa
     1201 cagcctatga cattgtagca ggaaccattg tggtaaaaag aaatggggtc agatgatgcc
     1261 ccaaaaccct gaattccact cttaggaata atgacaagac taaattatgt atcaaggcca
     1321 acattatctc tgcgttacat tagctgatga tttaaaaatt aaagcagtca ctctggtgtg
     1381 gtgcagggga ctgttctgaa agtgttgact gtacttaaat gtcaaggaac ttttccggaa
     1441 ggaaaaacta ttaaattcaa gtgttaaata tttataggac aacaaaagtt tcataatcaa
     1501 tatataggta aatacatact ttaacattta agataaccaa aatttgctgg aagcattttc
     1561 agctttaaat tctctaaatc aaactttaaa ttttggctta tcctagcgtg attgagaaat
     1621 atccaattgt gttttataaa cacctgcaga actccctcaa ctcttcttac agaccctgct
     1681 gcttatgagc attgagaaag agcatcaact caataaccca cttactccct gggagaagag
     1741 ggaacgtgag gaagacctag gagtccctca tcccacactt ccaggatagt ctagtttggt
     1801 gcagtagtgg cgggatattt cagtttctta ctgcttatgt atttggaggc aagattttca
     1861 tgatgatgaa aatgtactga gtcatatatc attgatattt taaaaaggta agttagtgat
     1921 tgccttctgg gggggagggg ttcattgtaa attcacatac cctaaaatcc aaccataaat
     1981 acgtgggagg aatatccatc gaacattccc agtgtgtgtt ctccagcgtt ctgaatgtac
     2041 ctgtagattc tctatgtaca gcaaatccct aatgcactgc tatgttctct acagtgccat
     2101 aactgtaaaa catcaggtgt tagagtgtat tttgtgacta acttaaatac taccaggttc
     2161 ccattatgaa ctgttgtttc atcatctgtg gactttagct tctttgagct catcttggtt
     2221 gtagtatcat tgtactttgc tctctgttgg agaaacaatt gggtttatgt ctgtgtgctt
     2281 ttgttatgtc acagtcagct agctgtacca aatgttagtt taaaacttta cttcttactc
     2341 attgttgcat ctgattttcc caaaaaacac taaattgtat tgcacaagag agcagtcttt
     2401 gttcctgggt tttaaacagc aagagcatgc catgtgttgt tatatcaatc ttaagtgagc
     2461 tttttttttt tgacatttaa aactgtgaaa atgcatttaa tgtctagata acttttaaat
     2521 atctcctaat agctcattgt tcatcaacca tggtttcttc tggtaaataa ttttatttaa
     2581 ataaaacttc acaggaagcc tactatttgt caagagcagt acatagagca tgtacttgtg
     2641 gctctggcaa gactttaaaa agctcttctt actccacact acaaatcagg aagctgctgc
     2701 gaacgcctgc cactgaacct gcactgacac aattcaagtt gaaatgcgct tcacccacac
     2761 agctctggag tactgattat tgtttctact ccaattattg tagttttcac tgaggatatt
     2821 tttatttata cagtaaaata agtagttaaa tttgttataa atactgcagt ttgctagaca
     2881 agttctttag atccagctgt ggattcaagc tgtgccatat aggatgtaat aaagtattgc
     2941 tttgcctcca caatagcacc tcaatctggt gtaaggagaa agggaatctg gcactttttt
     3001 cctcataggg ttatgtaatg gagcatgtga atgaagaatt tacagaaata ctaatttcct
     3061 gtgtcaaagt gtaattctca tgctgaagct gtatcctaaa agggcaaaat gaagttgaga
     3121 aatgaagaca ttcttcatga gcatgcccta acccgaaaca tcaggactgg agtcttgctg
     3181 ccgcattgcc atttagttta aatagctggc acgtgattaa ggcactgagt ctcagtactc
     3241 accgctgagt gtgttctgaa gtaggatatt ctacactctg ggtaacagca cgatgagcag
     3301 ccttactgag tattcttcgt gaccgtaaca aacacatgcc ccttcagtgt tcactgcttg
     3361 ctcctgccta caaagcacgt actccattgc catgcctgac cagtgactgt ttcactgtag
     3421 tacacgtctg tttctggcaa ggaggagaaa ggagttgaaa ttttgcattt gcaatttggg
     3481 tttctgaagg aagatggggc attaaacttt cattatctct ttgaggacaa tgcctagatt
     3541 aacagtattc ctaaactctc gacaggtact ggttcagctc cttgtcatcc tccatttgca
     3601 taaccaaaga ccaaagtcct gactcgtgcc tggctggtat gcgtaggttt ccttgtagtt
     3661 cactatagta ggacttgccc tgcaaacagt atctaatggc tcacgtataa taaacaaaac
     3721 attctatttt taatatttgt atgtcaccag tttgtacttt atgtctcaat aaatacttaa
     3781 tcagtgtcaa ga
//
