LOCUS       XM_039103385            1465 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 81,
            member B (Fam81b), transcript variant X1, mRNA.
ACCESSION   XM_039103385
VERSION     XM_039103385.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103385.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1465
                     /gene="Fam81b"
                     /note="family with sequence similarity 81, member B;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:309925"
                     /db_xref="RGD:1561830"
     CDS             30..1205
                     /gene="Fam81b"
                     /codon_start=1
                     /product="protein FAM81B isoform X1"
                     /protein_id="XP_038959313.1"
                     /db_xref="GeneID:309925"
                     /db_xref="RGD:1561830"
                     /translation="MAPFLAQLVTEKRKQVRLSPGKMSTKNSTELVEYVDKGCPFLPA
                     MPSNQTSQLQDRLNNQERTIAFLLEQAFRIKEDISACLQGSQGFRKEESLARKLLESH
                     IQTITSIVKKLNQNIELLEDQIRIRDQVATGTNFAVQDLNIKHIQGVGDLRGRVARCD
                     SSIVKLSGDMQFIRHECRQTEKSVQELASAIETISKNLDVKVMQLLGKIEASTSEHTS
                     NLKTVQGDYQHEMNLLDFKFNSLSTNIYEEVENNQKWTENQFIKYRKDHLGHMNECLK
                     VVQEKLEKSENKMEEKMLQLSSKLENFINSQKQEAEVNKVKAIENKVSKKMCQIEKRI
                     WGELEKMQNDYQSGFKSIHDSLNSLQQIQKTKMDLEKYKVQKDLKKLQRKIVELQEV"
ORIGIN      
        1 tctgcctgca gaacaccctg atctacctga tggccccctt cctggctcag ctagtgacgg
       61 agaaaagaaa gcaagtaaga ttatctccag gcaaaatgtc aactaagaac tccacagaac
      121 tagttgaata tgttgacaaa ggttgcccct ttcttcctgc catgccaagc aaccagacaa
      181 gtcaactaca agacaggctg aataaccagg agcgcaccat agccttcctc cttgagcagg
      241 ccttccgcat caaggaggac atctctgctt gcctccaggg aagccagggc tttcgaaaag
      301 aagaatctct tgccaggaag ttactagaaa gtcacataca gaccatcact agcatcgtca
      361 agaaactcaa ccaaaacatt gagctcctag aagaccaaat aagaatccga gaccaggtgg
      421 ccacaggaac taattttgca gtgcaggatc taaacatcaa acacatacaa ggagttggag
      481 accttcgggg aagagtagcc aggtgtgatt caagcattgt gaagctttcg ggagacatgc
      541 agttcatcag gcacgagtgc cgacagactg agaaatcagt tcaagaactc gcttctgcta
      601 tagaaaccat ttccaagaac ttggatgtaa aggtaatgca gctcttagga aagatagagg
      661 cctctacctc tgaacatacg tcaaatttaa agacagtcca aggtgattat cagcatgaaa
      721 tgaacctctt ggatttcaaa tttaactcac tttctacaaa catatatgaa gaagttgaaa
      781 acaatcaaaa atggacagaa aaccagttta tcaagtacag aaaagaccat ctgggccaca
      841 tgaatgaatg tctgaaggtt gttcaagaaa agctggaaaa gtctgagaat aagatggaag
      901 aaaaaatgct gcaactttca agcaagttgg agaattttat taactcccag aaacaggagg
      961 cagaagtaaa caaagtgaaa gccatagaaa ataaagtgtc caagaaaatg tgccaaatag
     1021 agaagcggat ctggggggaa ctagagaaaa tgcaaaatga ctatcaatca ggatttaaat
     1081 caatccacga ctccctcaat tctctccaac aaatacagaa aacaaagatg gatttagaga
     1141 aatataaagt acagaaagac ctaaagaaat tacagcgtaa aatagtggaa ctccaagaag
     1201 tataactttg aaggcacttt ctttccagca gcaggtgcaa gggttggttg ggaaaagttg
     1261 tgaagaagaa aattaatatc tttaggatat tactactggt gtttcttatc accactaaag
     1321 taaatagaca tttcaggagg aaaaaacaca aaataaatca aaaagcttca tgatgccttt
     1381 aatttcttaa tgaaaaatta agaaatttgt tttcatgcat gcattatttt tttgtttgtt
     1441 tttttgtttt ttccagaact gaaga
//
