LOCUS       NM_001398658            3375 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 78, member B
            (Fam78b), transcript variant 1, mRNA.
ACCESSION   NM_001398658 XM_039091406
VERSION     NM_001398658.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On Dec 21, 2021 this sequence version replaced XM_039091406.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643294.48383.1, CX569547.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-767               JAXUCZ010000013.1  81695329-81696095
            768-3375            JAXUCZ010000013.1  81771524-81774131
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q23-q24"
     gene            1..3375
                     /gene="Fam78b"
                     /gene_synonym="RGD1564387"
                     /note="family with sequence similarity 78, member B"
                     /db_xref="GeneID:498269"
                     /db_xref="RGD:1564387"
     exon            1..767
                     /gene="Fam78b"
                     /gene_synonym="RGD1564387"
                     /inference="alignment:Splign:2.1.0"
     CDS             505..1290
                     /gene="Fam78b"
                     /gene_synonym="RGD1564387"
                     /codon_start=1
                     /product="protein FAM78B"
                     /protein_id="NP_001385587.1"
                     /db_xref="GeneID:498269"
                     /db_xref="RGD:1564387"
                     /translation="MGCIQSITCKARIRRENIVVYDVCATIDQCPTRIEETSPIVLRY
                     KTPYFKASARVVMPPIPRHETWVVGWIQACNQMEFFNTYSDLGMSSWELPDLREGRVK
                     AISDSDGVSYPWYGNTTETVTLVGPTNKISRFSVSMNDNFYPSVTWAVPVSDSNVPLL
                     TRIKRDQSFTTWLVAMNTTTKEKIILQTIKWRMRVDIEVDPLQLLGQRARLVGRTQQE
                     QPRILSRMEPIPPNALVKPNANDAQVLMWRPKRGPPLVVIPPK"
     exon            768..3375
                     /gene="Fam78b"
                     /gene_synonym="RGD1564387"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcagaggtt catgcagcgg cggcggcggc ggcggctgct gctgctgccg ccgcggaaac
       61 agacagaccg gtcgctgctg ccgccaccct cccgcagctc catgccgccg ccgccgcctc
      121 ctcctctccg gcgaagggcg gggggctccg gcccggggtg ggcaccactc ctcacagcgc
      181 cgctcccctc cctgccctcc gccggggcgc gggagccggc gagagcgccc gccgcctcct
      241 aggagcgcac gctccgcgcg cccttgctgg agcgaggagg cgggcgtggg cgggcgtcgg
      301 ggcagccgcg acccagcgcg cggaaagggg agggggcttc cccggaggat gccccgcggc
      361 ggcggctcct tgctcttagg cgctagctga gctggaccgg gagcgagcgg cgcgtcgcca
      421 tgccggcgtg acgggcgccc gcggctgccc gcgccgggcc cccgcgctgc cccacgccgc
      481 gccgcgccgg cgccgggcgg caggatgggc tgtatccaaa gcatcacctg caaggcgcgg
      541 atccggcgcg agaacatcgt ggtgtacgat gtgtgcgcca ccatcgacca gtgccccacg
      601 cgcatcgagg agacctcgcc catcgtcctg cgctacaaga ccccttactt caaagcctcg
      661 gcccgtgtgg tcatgccccc catcccccgc cacgagacct gggtggtggg ctggatccag
      721 gcttgcaacc agatggagtt cttcaacacc tacagcgacc tgggcatgtc aagctgggaa
      781 ctgcctgact tgagggaagg aagagtaaaa gccatcagtg actcagatgg ggtgagctac
      841 ccatggtacg ggaacacgac agaaactgtg accctggttg gccccaccaa caagatctcc
      901 aggttttccg tcagcatgaa tgataacttc taccccagcg tgacatgggc agtgccagtg
      961 agtgacagca atgtgccact gctcacaaga atcaagaggg accaaagttt taccacctgg
     1021 ctggtagcca tgaacaccac caccaaggag aagatcattc tgcagaccat caagtggagg
     1081 atgcgagtgg acattgaagt ggaccctctt cagctgttgg ggcagcgggc ccggctggtg
     1141 ggcaggactc agcaggaaca gccccggatc ctgagccgga tggaacccat cccccctaac
     1201 gcactagtga agcccaatgc caacgatgcc caggtcctca tgtggaggcc caagcggggg
     1261 ccacctctgg ttgtaatacc tcctaagtaa aagcagactg cccaactgtg tggaacacat
     1321 gccactgaga cccgcagtgg ggtgaccagg ggtggcagga gccaaactga gtttctgagc
     1381 caaagcagac ctcttggtgt gccagccttt gcagctactt gtgacgagta cagctgctcc
     1441 ttgggcggta gaaccataac ccttaggaaa agcccccttc ctcttaggaa taaagaaacc
     1501 actgatttga tagacttgct ctgattaccg tgcaagtagc catattttgg agctgaccag
     1561 gacgattctt ttatttgaac tattgaccat ttctttcccg tgagatgcag ggaatggaaa
     1621 tgaaactaaa cagtgcctgt ggcagatgct gcttcccaac caattagaag cgagagtgaa
     1681 aacatccaca ccaggtgttc gtaagacagt ctccttgtgg gactggaggg tgctggggaa
     1741 ttgggtgaaa gatcctgggt gctggggaga gaggagaaga aggtgttact acaggttact
     1801 atcaagtgtt agctgatggt cagtacatcc cctggaatga gaagggacac ttagggaact
     1861 agaaacatag tgtgcccttt gttttgaggg agaagctggt tttggaactg tccgaggtgc
     1921 tgatgtcagc agcccccgtg gagactggct gcttccattc actcacctct ttccaaagag
     1981 attgctcatt ctaagtgttg ttagttacgg tatcggatgt gtagttactg tttttctgta
     2041 gcgaatatgg cgttgggtcc ctcttgagtt cttagtcact caatctgtga ctttgtttac
     2101 agccagtgat tcctatcacc agccctcgat ttacaaagat gtgtaagcct cgtgtttgta
     2161 gggtttcggg aacatctcaa caaatgagaa aaaaattttc aattcttagt ttataaattg
     2221 tatgggcaca ggaagggcac acatctgtgc gcacacgagg gtgctcacac accagtattt
     2281 agaatgaaaa acaactagtc tcgccagtag tgcctggaca ttcatggcct ttaaacgcaa
     2341 atagtacata caccgtatgc ccacgtaggt taacttcagc tgtccttaca aaaactcaac
     2401 ttcaactgct tgaccaactg tagatgagaa atgttcaggc ttctctagtg aaggtctgag
     2461 ccttaacgcc atcttgtgtt gctgacatcc agccaataaa gatgagaagt gatcttcctt
     2521 ttagtccagc agtgtaaaac tttttaaaga gtttccagtg tttacagtgg taagatttcc
     2581 aacccttccc accgaagcta tcgtgcccca caccccaaag aaaagcctcc cctgttattc
     2641 tcaatggcac agattgtgaa atacatcctt ccttgttcag aaactcctca tgtaacctga
     2701 ctacagaatt ttcacaatgt tgtatactga gtaggtagat tctttaaacc taatttcaga
     2761 ggtgagagat ttccaagtcc agagccatta tacaaatcct gtcattgact ccaaatcttc
     2821 cagagtttgg ggacagagaa tgcaaaccag taggctttct cattaccctt gtttgccatg
     2881 tactgtagtc taatttcctt catgctctgg tcccaaagga tgctactcgg aataatgtag
     2941 cactaacttc acactccacc catcagcttc tctcacctag attagttatc gatggcaagt
     3001 tatttatagc aacacattaa tagctcattg gtaacattgg tgagttgcaa agactctatt
     3061 tagaaataat tcagctgtta acttttggat ttcccatgct tccctacttt tgaatggcag
     3121 aactgacctc agagacctac agattgaaga gtaaaattgc ttattttcca tgctaacatc
     3181 agaagcagca atctctccct tgtattgaat tagatgccac tcttatgaga tttgggtcaa
     3241 tggatgctga tcttggaatc taagccatgt agcaccactt taagaaaatc tgattttttt
     3301 ttcttacatc taaaattgta acaacagatg aataagttta tattaaaaat tctatgcaag
     3361 gtttcagact taaaa
//
