LOCUS       NM_001399463            4051 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 78, member A
            (Fam78a), mRNA.
ACCESSION   NM_001399463 XM_039106174
VERSION     NM_001399463.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 7, 2022 this sequence version replaced XM_039106174.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.11225.1,
                                           SRR26643289.8553.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMN16676784
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1133              JAXUCZ010000003.1  35769316-35770448   c
            1134-4051           JAXUCZ010000003.1  35753712-35756629   c
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..4051
                     /gene="Fam78a"
                     /gene_synonym="RGD1566351"
                     /note="family with sequence similarity 78, member A"
                     /db_xref="GeneID:499776"
                     /db_xref="RGD:1566351"
     exon            1..1133
                     /gene="Fam78a"
                     /gene_synonym="RGD1566351"
                     /inference="alignment:Splign:2.1.0"
     CDS             811..1662
                     /gene="Fam78a"
                     /gene_synonym="RGD1566351"
                     /codon_start=1
                     /product="protein FAM78A"
                     /protein_id="NP_001386392.1"
                     /db_xref="GeneID:499776"
                     /db_xref="RGD:1566351"
                     /translation="MPCYFWDCWPSLEIRAVLCAMGCIQSIGGKARVFREGITVIDVK
                     ASIDPIPTSIDESSSVVLRYRTPHFRASAQVVMPPIPKKETWIVGWIQACSHMEFYNQ
                     YGEQGMSSWELPDLQEGKIEAISDSDGVNYPWYGNTTETCTIVGPTKRDSKFIISMND
                     NFYPSVTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIE
                     VNPNRPLGQRARLREPIAQDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLV
                     VIPPKHR"
     exon            1134..4051
                     /gene="Fam78a"
                     /gene_synonym="RGD1566351"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagctccg cagcccgcgc ccggcacaca cgcatcgccg cgccctcgag tcccccgcag
       61 taaagttcgg ctcaactttg acgccctgtg cctcccacct ctctgcaggt cctcggcggc
      121 cgaggcgaag caggcggcgg cggacaccag agcgcagccc cggagcccta cgcggcagtc
      181 ggcggctaca gcgacagtag cagaggagcg cgcgagtggg cgccggaggg gacccggcga
      241 gcacctagcc cggagcgcac cttttggaac cgcgggtggg tgcgggcctc acaggacgcg
      301 ggacctctgc cgcttgaacg ggagctcacg ctgcaattga ttgggccccg ccgggcgggc
      361 gcgtgtgtcc cagggagccg gtgcggaagg cagaagggca ggaagtcggc gttctgcagc
      421 gagggtggcg cgaccgcgcg gggaccgagc cttccttatt tatgtgcctg ccagagcccg
      481 tctgcttcct cagaagactt caaggagagt gtccgagctg ccatccccaa gtgtgaggac
      541 gcagcgctgg atgtcagaac aacatgctta tccattaaac tccaaacttt tcttttttta
      601 aacccaaaga atatcggtgg ctcttgccca ctgctagaag agggagccca gggctcttga
      661 gatgcagcag aatccgtatt tataacaagg ccctgtagtg ctatgcaagc cccctcctct
      721 ccttaagttt tctagcctat ggatatcgct tttgagtttt gagattagat tgcgcactct
      781 gcactgggtc ctgcaacctc catcctttca atgccctgtt atttttggga ctgctggcct
      841 tccctggaga ttagagcggt cctgtgtgcc atgggctgta ttcagagcat cggaggcaaa
      901 gccagagtct tccgggaagg gattaccgtg attgatgtga aagcctccat cgaccccatc
      961 cccaccagca ttgacgagtc ctccagcgtg gtactgcgct accggacacc ccacttccgg
     1021 gcctcagccc aagtggtcat gccgcccata cccaagaagg aaacctggat cgttggctgg
     1081 attcaggcat gcagccatat ggagttttac aaccagtatg gggagcaggg catgtctagc
     1141 tgggagctcc ccgatctcca ggaaggaaag attgaggcca tcagtgactc tgacggggtg
     1201 aactatccct ggtacggtaa taccacggag acctgcacaa ttgtggggcc caccaagaga
     1261 gactccaagt tcatcatcag catgaacgat aacttttacc ccagcgtcac gtgggccgtg
     1321 cccgtcagcg agagcaacgt ggccaaactg accaacatct accgggacca gagcttcacc
     1381 acgtggctgg tggccaccaa cacctccacc aatgatatga tcattctgca aaccctgcac
     1441 tggcgtatgc agcttagcat tgaggtgaat cccaaccggc ccctgggcca gcgggccagg
     1501 ctgcgggaac ccattgccca agaccaacct aaaatcctaa gcaagaatga gcccatcccg
     1561 cccagcgccc tggtcaagcc caatgccaat gacgctcagg tcctcatgtg gaggcccaag
     1621 tacgggcaac cgctggtggt gatcccgccc aagcaccggt aacagccagg tcgctgcgag
     1681 gtgagactca acgtaacaat attactgctc agaaggaaac ccagatgccc tgtccggtca
     1741 ttcagaaaaa tacaaccatt ctaccttctc cccggggcgg atctcactgt gctaataccc
     1801 gctggcctcc tggctcatcc ccgtgcttcc ctgcagggag gggggccagt aggacaacag
     1861 gcgcccaccc caaccccagg gctcctctcc tcccctcaca acctcagtgt tcattgcagc
     1921 cgactctctg aaacacagct tttttatttt cccctcctct ttgtggattg gggggcaggg
     1981 gagaaggctg attgtcaggg aacccagcct gcccttccca actccccctg ccctcctcct
     2041 ctgccatgcg gccttatgta gactcgcttt gccaaacttt tgccttaagc tggatttaaa
     2101 ggagagaaag aaacggaaag gtcacggatc gctgccctct tctgtcagag ccggaaagag
     2161 gggaggccca cgggagcccc tgcccctctc ccggggtgtc tgggtgaggg acaagagttg
     2221 gatctcaggt gtaaaaccag ctgttttatt ctgtcgtttg ggcggaatca aaaccacaga
     2281 ctctgcctag agctccaccc cagtagaacc cctccccagt acccaccagg ggtgcaagct
     2341 gagccgggca aagatccttg acccctcctc tctcttcaga agccttaact cgcctggtgg
     2401 aggtattctg ggtaaagaaa cggggagttc ccaaagtgtt aggttggggc tagggaactt
     2461 tttcactttt gctatctcta gagcccaccc caaggggtgt ggctttttct cttccactta
     2521 ccttggtccc aaatacctgg cagggttaag gtaggggcat tgccactcag tctggacagt
     2581 gccagctgtc tcagggtaaa gaaggtgtgc ccttttgtcc tggccagcac tgttacactt
     2641 gaatctgggg ttccagcacc cagggatgcc catgcgctag cacactgtaa agaagccatg
     2701 ttagggcttc tggctcattc tcaggggaag cggatcccag actctctggg gtgggcttag
     2761 ataggctcaa agtacccgct ggagggtgct tgggctcctc ccctccccat cataggtgct
     2821 tctggggagg tgtgtggagg tctggggagc agtcagctga ctcaatgtct ctgtctgaag
     2881 aaggaaaccc aggcccagtg ctagagagtc tcccatgctt gagcggtgtc aggccattgt
     2941 gaaactggct tgacaacata gtatgtagtt ttggggtcta ccttctggag cactagaact
     3001 gggccttgag tgatatcaag gtttctagaa atgtctgctt tgagctgctt gagggatact
     3061 ccttgaagca tgcatcactg gattcgaacc aataataagc acagaaaacc gttatcacag
     3121 gaaaaaaaat gtttttgctg ctgctgagcc atttgtaggg gaaccttgga gacagcgtgg
     3181 gagggtacag ctagatccca gctctgtttc tacactcgag atgcttgtcc ttccgggcta
     3241 cttaatgtct ggtcattctc agccagtaga gctgggggct gcagccacct ggcatacacc
     3301 gagcagagca tgcccatggc acagttgctg gagagccgct tgtcagggtt gacgtctctg
     3361 gagccttcct tttctctagg tggaggctgt caccttagct gggagagcca tgaggtcgca
     3421 gccccacact agatcagggc tgctgttgac tggaaaggcc ttctgtgtgt tcaggattgc
     3481 cctgaagaag agagacaggc cctggtgagg gttgggaggc aagtctttgt cctgggctgg
     3541 gtggtctgga agggttttgt gggcttaggg attaggaatc ccagtagggg tggcctgaac
     3601 tgctctggac atggggaccc cctccaaccc acatttcttg agctccttcc ccactgcatg
     3661 cctggctttg cctccctggc ttccttggct cctctttcct cactaccctc ctgcctggca
     3721 gaagacaggg ctggggagaa ccccagagag gctgtgtgga tcttcgagag agcacccagc
     3781 ttctctgggg ctgctcccct cagcccgttg cctcatactg tcgacagacc ccaggctttt
     3841 ccttcacacc catgcccacc caggcatgga cactcactgt ttccagcaat aagcaccaac
     3901 cgtccttggt cacggacagt actgtgaaca caaacccatg cgtgcactta ccagcagacg
     3961 cgagactctt gaagacaatg tcagatgaac cttttttttt ttaaagattg aaatcaaaga
     4021 tataaagaga aataaaatta attttaaagc a
//
