LOCUS       XM_006254613            4219 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 53,
            member C (Fam53c), transcript variant X2, mRNA.
ACCESSION   XM_006254613
VERSION     XM_006254613.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006254613.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4219
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4219
                     /gene="Fam53c"
                     /note="family with sequence similarity 53, member C;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 47 ESTs, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 100 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685405"
                     /db_xref="RGD:1593851"
     CDS             335..1507
                     /gene="Fam53c"
                     /codon_start=1
                     /product="protein FAM53C isoform X1"
                     /protein_id="XP_006254675.1"
                     /db_xref="GeneID:685405"
                     /db_xref="RGD:1593851"
                     /translation="MITLITEQLQKQTLDELKCTRFSLSLPLPDHADIPNCGDPFQLV
                     SEGASWRGLPHCSCAEFQDSLNFSYHPSGLSLHLRPPSRGNSPQEQPLSQVLSPEPPD
                     PEKLPVPPAPPSKRHCRSLSVPVDLSRWQPVWRPAPSKLWTPIKHRGNAGGGGPQVPH
                     QSPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSQPCATSPQSGSWESD
                     GESLSPCPPQRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQPC
                     DLDARKTGVKRRHEEDSRRLRPSLDFDKMNQKPYSGGLCLQETAREGSSVSPPWFMAC
                     SPPPLSASCSPVEGSSQVLSESEEEEEGSVRWGRQDKRTVCQQDFGDLDLNLIEEN"
ORIGIN      
        1 ccgcaaccgt tataaatctc aggtttataa aagctccagc agatcaggca gctagaagag
       61 gggctcgggg actcagagca ggccctgacc ggcgcttgga ctacatttcc cagcagcctt
      121 cacgccgagg atcagtcctt gccgggggaa ggtgggggga tgcttacaga aaggtggctg
      181 tatcgaaagg gacaggagcc cagacgccgc aggcatgact ggagagggag gtcccaatgg
      241 tgctgcagtg gcagaaggtg gctcatgagt gagatccaga agaaccacag ggaagacatc
      301 catcaagtgt gcgagtcaag tcctgggcag aaacatgata accctgatca ctgagcagct
      361 acagaagcag acgctggatg agctgaaatg tacacgcttc agcctcagtc tgcctttgcc
      421 tgatcatgca gacataccca actgtgggga ccctttccag cttgtgtctg aaggtgcttc
      481 ctggaggggc ctgccccact gttcctgtgc tgagttccag gacagcctca acttcagcta
      541 ccatccctca ggcctaagcc tgcacctcag accacccagt cggggaaact ccccacagga
      601 gcagcccctc tcccaagtac tgagccctga acccccagac ccagagaagc ttcctgtgcc
      661 ccctgcccct ccatccaaga ggcactgccg ctcactctcg gtgcctgtgg acctgtctcg
      721 ctggcagcca gtgtggcggc ccgccccctc caagctgtgg actcccatca agcaccgggg
      781 caatgctgga gggggtgggc cgcaggtgcc tcaccagagc cctccgaagc gggtctccag
      841 cctcaggttc ctacaagctc ccagtgcctc ttctcagtgt gcccccgccc acagacccta
      901 cagccctcct ttcttcagcc tggccctggc ccaagattcc tctcaaccct gcgccacctc
      961 ccctcagagt ggttcttggg agagtgatgg cgagtccctg tcaccctgcc caccccagcg
     1021 ccgcttctcc ctgtcaccca gcctgggccc acaggcaagc cgcttcctgc cctctgcccg
     1081 gagctcccct gcatcctccc cagagctgcc ctggagaccc cgaggtctcc gcaaccttcc
     1141 ccgaagccgc tcacagcctt gtgatctgga tgcccgcaaa actggtgtca agcggcgtca
     1201 tgaggaggac tctaggcgcc tgcggccttc cttggatttt gacaagatga atcagaaacc
     1261 atactcagga ggtctctgtc tccaagaaac agcccgagaa ggcagcagcg tctctccacc
     1321 gtggttcatg gcctgtagtc ccccacctct ctctgcttcc tgcagtcccg ttgagggttc
     1381 atcccaggtg ctgagcgaaa gcgaagagga ggaagaaggg tctgtgcggt ggggacggca
     1441 ggacaagcgg acagtgtgcc agcaggactt tggggacctg gacctgaatc tgattgaaga
     1501 aaactaaaag ggagaggctg cttcctgggc cgagcagact gtctaatggc tactaacaca
     1561 tgtgaaggcc ccaaggctga gggcccagcc tgggaaaggg gatgagtgga gggctccgac
     1621 tcagggcagc ccaagtcttc ctgctccagc aaactcgacc atgccaagag actggccggg
     1681 acaagataaa cggagctggt ggcgggaggg acagccccag agcagaccct ccccatggcg
     1741 gccctgagtg tgagtatccc tgccactgag agcgatgggc agggaaggaa ggggtctgct
     1801 gaccccagct cggggaattt cactagcccc tttgcttcaa agggcacttg tgtcttagaa
     1861 tttggccagg gtggggggtt cagtcagcct ccttggagaa attgtgtgag tgtgtgtgtg
     1921 tgtgcatggc tgtgtacttg aggaaaggtg tgtttgtgta gccttagggg aggaaggcag
     1981 ttgctccttt aacagcagag catcaggatg ccccaagaat cttggtttct tgttttctta
     2041 ctataacatg gggcttgttc aaggtgtcat gaagagagag cttttttttt tttcttttgg
     2101 gtcttaatag ctctggaggc tggcttcgaa gttcatagtg tcactgctct gcacatgact
     2161 ctgctctggg gtctagctag cagaatcttt tgagtactgt gatttcagct aatggtcttt
     2221 tcttaagtcc cgccctcctc ccctagatga atctcatatt gaggacttgt gaggcagcca
     2281 ccacacttac tgttttcatc agcttttcta agctgtatgc agcctgcctc tcttgttctc
     2341 tgagaaggtg ccaacagatg tacaactgag gcagactgag gagctccagc tctctttcct
     2401 tcaccaagtg gacctttcct tttctgatct tacaagtcag agacaaaagt tgatctccag
     2461 aatatgttga ggcagaccag cagcaggaga ggccaccccg gcactgcctt ttggaatctg
     2521 gctgtgggga aacttattct tgcaagatct aggcccagtc tctttctgat ctgcttgaaa
     2581 aagaggaagg gtgttcagca tttaatagtt tgcttgtctt ccactcttgc caggaaatgt
     2641 ttatttgcct ctaattggcc ctgagagacc acagagaggc tggggctcac tgagggattg
     2701 gctggggatg tataaagcaa aggctatggg aagcagctgg gagtttgttg ttgttggatt
     2761 gaatttcttt ttttgtttct tacccacaac ttcagccagt gcagcagatc ccagtggcta
     2821 gggtgatgga cttaaagatt gcagatacat tcataaggtt ggcacctgtg ggcatgcatg
     2881 tagaagctgc cactcctgca gtctttgagg ctttgtgtag aatgccctgt ataacgaaat
     2941 tggacctgcc cttcccattt attgtagtaa gggcatattt ctgttcaatt tcaatggtgt
     3001 tttaaggccc agtttctaat gttacagaag acaaccaagg tcatgttctt tcttctttgt
     3061 ggaattgagc ctgatgtgta atgtctccca catgttaata ggaatgctgt tgaggcttca
     3121 gactctttgc ctccacttca ggggaggtag ccatgtcttc ttaaacctgt ggccctcaga
     3181 ggttctacct ttccaaggct cctccctatc tcctggctag ttaccacgtc ttaccactgg
     3241 gctaccggtc tctaagggcc taagagagac tcctgagaac ccagggaaac tgagcccagg
     3301 agttattgta ggtttcatct ttccctggtt ctccctcttt ggtccataat ttccctggtg
     3361 ccagcttcct ttccacctgg ggcatcctca tccctgggtt ctctgctgca gatgacagtg
     3421 tcagcctcca gtaggtcact ggcagtgcca gtggggtctc tgcaggccct aagtttaagt
     3481 gacggcagtg attctgcctc caccctggct ctcccaaagc ccttaggtca ccacccttag
     3541 ggaaggaggc ctacaattgt catattttaa ttccattact ttaagtctgg aatgttaaac
     3601 tcggcagaac tatcatcttg cttcccagtt taaatgcctt tggccctgga acaagccttt
     3661 tcaagacgtg aatcatttgt tttacacagt agatctgttc caacagttct gtgtaaacca
     3721 aacgctattt tttaatgcat ttggactgct gaccatgtaa aagcagccta tgattgcttc
     3781 ttttgtaaag caagcagcct ccctctacgt tagccagtct catcatttgg gttcccatgg
     3841 tgggctcacc cagagtggag cacacctcct gggcttgtgg ctgatgctct gtgatgtctg
     3901 catctgtgct gcgtgtgtgg cgtggctggc cagcaggtga gtattactgc gtgtgtgagt
     3961 gaagccactc ccaggctgat gctctcctcc tgtgcccggt gtgcccggtg gcagctcccg
     4021 ctgcccttca ttcccacctg ctgccaaagt ccctgtgctc atgggattac agaaacaaaa
     4081 agtggaaaaa ttttttcgta aactttgttt tatattaaaa aatccataag tctgtgtgtg
     4141 ttaaaacatg aggttctgcc tctgtggctg tgtttgaaaa aaataaagtt ttattagaat
     4201 aatccatttt cccaagcaa
//
