LOCUS       XM_039092674            1641 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 47,
            member E (Fam47e), transcript variant X1, mRNA.
ACCESSION   XM_039092674
VERSION     XM_039092674.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1641
                     /gene="Fam47e"
                     /note="family with sequence similarity 47, member E;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     5 samples with support for all annotated introns"
                     /db_xref="GeneID:686140"
                     /db_xref="RGD:1585459"
     CDS             117..1445
                     /gene="Fam47e"
                     /codon_start=1
                     /product="protein FAM47E isoform X1"
                     /protein_id="XP_038948602.1"
                     /db_xref="GeneID:686140"
                     /db_xref="RGD:1585459"
                     /translation="MAERGQRLQPKTLAPKLMRERRNCGWYLENLPSKRLPKSSRLTL
                     NSRHWVFVKEGLDDFRKDCPPHQGPKDAFLPLIHHGAPNATPKGRQSRLPTGTTLSKL
                     SKAGKTFLEEVEAKDDALHPLALYPQIKEALPAELLLKVLEVLDPERKLEDAWACCRD
                     TRELMKEPTKLVEERSSQVCPPKKMLMSRSGQWLCEEKPSKVDSLYKDSLLHDDIRRG
                     VSNFCHWAADLGSSTIEEEFILQQFDIDYQTRCSCDELHRLRLTQDKPCINGPPPHRE
                     RCGHGIKPRSSGRADLVNFYDFQEEETTELSALLAHPVCSKPPFPCVDLCLLLDENPQ
                     QPKRVRMRYGAWYLNTKLWKRQRADEPLVDPRVSPKAQDSNFEKQLQEQEELLADLCG
                     TAAFKDFVLSRGYRMPRFLEKIYAEEEKSKSENIRTPKKLTETERNPGRR"
ORIGIN      
        1 ggccaaattg ggcaggtctg ggcagctcag ggctgtgctg atctcctagc aactcgggaa
       61 gccgtggggg aacttgcaac ccaagtcccg gcagtggtca tgcagcgggc agtgccatgg
      121 cggagcgtgg gcagcgactc cagcctaaaa ctctggctcc gaaactgatg agggagcgcc
      181 ggaactgcgg gtggtacctc gagaacctgc cttccaaacg tctcccgaag agtagcaggc
      241 tgacattgaa tagccggcat tgggtgtttg tgaaagaggg gctggatgac ttcaggaaag
      301 actgcccccc acaccagggc cccaaggatg cctttctacc tcttattcat cacggagccc
      361 ccaatgctac ccccaagggg aggcagagca gactgcccac ggggacaacg ttgtctaagc
      421 tttcgaaagc tgggaagaca ttcttggagg aagtggaagc taaggacgac gcactgcacc
      481 ccctggctct ctacccacaa attaaagaag ctctgcctgc tgagctctta ttgaaggtgc
      541 ttgaggtact cgacccagag aggaagcttg aggatgcatg ggcttgttgc cgggatacca
      601 gggagttaat gaaggaaccc acaaagcttg tagaagaacg ctcttcccaa gtatgcccgc
      661 ccaagaagat gctgatgtca cgttcaggcc aatggctttg tgaagaaaag ccaagcaaag
      721 tggattcact ctataaagac agtctcctcc acgatgacat acgcagagga gtcagcaact
      781 tctgccactg ggctgcggat ctcggaagct cgaccatcga ggaagagttc atcctgcaac
      841 agtttgacat tgactatcag accagatgca gctgtgatga gcttcacagg ctgaggctaa
      901 cccaggacaa accctgcatc aatggaccac ctccccatcg agaacgctgt gggcacggga
      961 tcaaacctcg gtcctctgga agagcagatc ttgtgaactt ttacgacttc caggaggaag
     1021 agactactga actatcagct ctgctcgcgc atcctgtctg ttcgaagccc ccctttccct
     1081 gcgtggatct ctgtctcctt ttagatgaga atcctcagca gccgaagcgg gtgaggatga
     1141 ggtacggagc ctggtatctg aacaccaagt tgtggaagag gcaaagagcc gacgaacctc
     1201 tggtcgaccc cagggtctca cccaaagctc aggattcgaa ttttgaaaaa cagcttcagg
     1261 aacaggagga actgcttgca gacctatgtg gaacagccgc ctttaaggac ttcgttctaa
     1321 gcaggggcta caggatgccc aggttccttg agaagatata tgcggaggag gagaaaagta
     1381 aatctgaaaa tattaggact cctaaaaagc tcacggaaac agagaggaat cctgggagaa
     1441 gatgagtcag cttttattga cagcatattt gaatactgct ccattatttt aattattaag
     1501 tagaatatag caagtgctat ctgtggaaac ttcaacccgg tctttctaaa tgctttagct
     1561 tatcatttta tatatatata tatatatata tatatatata tatatatata tgtatgtatg
     1621 tatgtatgta tgtatgtata t
//
