LOCUS       NM_198771               1354 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus FAM3 metabolism regulating signaling molecule C
            (Fam3c), mRNA.
ACCESSION   NM_198771 XM_231573
VERSION     NM_198771.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Abonnenc,M., Nabeebaccus,A.A., Mayr,U., Barallobre-Barreiro,J.,
            Dong,X., Cuello,F., Sur,S., Drozdov,I., Langley,S.R., Lu,R.,
            Stathopoulou,K., Didangelos,A., Yin,X., Zimmermann,W.H., Shah,A.M.,
            Zampetaki,A. and Mayr,M.
  TITLE     Extracellular matrix secretion by cardiac fibroblasts: role of
            microRNA-29b and microRNA-30c
  JOURNAL   Circ Res 113 (10), 1138-1147 (2013)
   PUBMED   24006456
REFERENCE   2  (bases 1 to 1354)
  AUTHORS   Zhu,Y., Xu,G., Patel,A., McLaughlin,M.M., Silverman,C., Knecht,K.,
            Sweitzer,S., Li,X., McDonnell,P., Mirabile,R., Zimmerman,D.,
            Boyce,R., Tierney,L.A., Hu,E., Livi,G.P., Wolf,B.,
            Abdel-Meguid,S.S., Rose,G.D., Aurora,R., Hensley,P., Briggs,M. and
            Young,P.R.
  TITLE     Cloning, expression, and initial characterization of a novel
            cytokine-like gene family
  JOURNAL   Genomics 80 (2), 144-150 (2002)
   PUBMED   12160727
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Nov 27, 2020 this sequence version replaced NM_198771.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY228475.1, FQ150932.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115, SAMN16676810
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-90                JAXUCZ010000004.1  51852941-51853030   c
            91-144              JAXUCZ010000004.1  51839689-51839742   c
            145-249             JAXUCZ010000004.1  51835674-51835778   c
            250-279             JAXUCZ010000004.1  51827434-51827463   c
            280-403             JAXUCZ010000004.1  51826383-51826506   c
            404-462             JAXUCZ010000004.1  51819857-51819915   c
            463-513             JAXUCZ010000004.1  51818767-51818817   c
            514-598             JAXUCZ010000004.1  51816062-51816146   c
            599-725             JAXUCZ010000004.1  51806885-51807011   c
            726-1354            JAXUCZ010000004.1  51805686-51806314   c
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..1354
                     /gene="Fam3c"
                     /note="FAM3 metabolism regulating signaling molecule C"
                     /db_xref="GeneID:312159"
                     /db_xref="RGD:735193"
     exon            1..90
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            91..144
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..815
                     /gene="Fam3c"
                     /note="FAM3C-like protein; interleukin-like EMT inducer;
                     protein FAM3C; family with sequence similarity 3, member
                     C"
                     /codon_start=1
                     /product="protein FAM3C precursor"
                     /protein_id="NP_942066.1"
                     /db_xref="GeneID:312159"
                     /db_xref="RGD:735193"
                     /translation="MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGSLFARSAL
                     DSAIRSTKPPRYKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGR
                     GINVALVNGKTGDVIDTKYFDMWGGDVAPFIEFLKTIQDGTVVLMATYDDGATKLTEE
                     ARRLIAELGSTSITSLGFRDNWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEM
                     EGCIPQKQD"
     exon            145..249
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            250..279
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            280..403
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            404..462
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            463..513
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            514..598
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            599..725
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
     exon            726..1354
                     /gene="Fam3c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcgcgatc ggcgcgctcg ggaggcggcg gcggcggcgg cacctcccgt cggcctccgt
       61 cagaactgac ggcggcgcga ccgcaggcag gtcattcttt cctagaagtg ctagagagta
      121 agaaggcaaa aatgagggta gcaggagccg caaagttggt ggtagccgtg gcagtgttct
      181 tactgacctt ctatgttatt tctcaagttt tcgaaattaa aatggatgca agtttaggaa
      241 gtctatttgc ccgatctgcg ttggactcag ccattcgctc aacgaagcct cccaggtaca
      301 aatgtgggat ctcaaaagcg tgcccggaga agcattttgc ttttaaaatg gcgagcggag
      361 cagccaatgt agtaggaccc aagatctgcc tggaagataa tgttttgatg agcggtgtga
      421 agaacaatgt tgggagaggg ataaatgttg ccctggtgaa cgggaaaacg ggagatgtga
      481 tagacaccaa atattttgac atgtggggag gagatgtggc accattcatt gagtttttga
      541 agaccataca ggacgggaca gtagtgttaa tggcaacgta cgatgatgga gcaaccaaac
      601 tcacggaaga ggcacggcga ctcatcgccg aactggggag cacatccatc accagtcttg
      661 gcttccgaga taactgggtc ttctgtggtg gcaagggcat taagacaaag agccccttcg
      721 aacagcacat aaagaacaat aaagacacaa acaagtacga ggggtggccc gaggtggtcg
      781 agatggaagg atgcatcccc cagaagcaag actgacgggc accggaggcg aggacaaacg
      841 cacttcgatt ctgtgggaga gctgtcaagc agccgcgcgg tgtacatatt tcagtagcat
      901 gaggccgtcc agggtgtgca tgagcaagac catgatgcca ggattattta ttgctaacag
      961 aaatggctac ctttgtaaat agacctcatt gagccaatca ctgaactctt tgtaagcaca
     1021 tttcccccaa agtccagtgt ttagacgaca gtggcaataa tgtattcatt ctagtagtca
     1081 gtggtaacca ggcagcttgt ataggacatt gatatttacc ctggttgctg tgaaacccta
     1141 tccatggaat aacatggctt ttagaaaagg aggagatttt gttatatgtg tctctgtata
     1201 aatatctggc atgtgctgag agtatccttt aaattaaaga gatttttggc tagttgtata
     1261 tgtactgtta ccctacagtc tgactcatgt tgtatctgtt cacagtcttt attttttttt
     1321 cccttccaaa gaaatccaga aataaaaact tttc
//
