LOCUS       NM_001130581            3219 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 227, member A
            (Fam227a), mRNA.
ACCESSION   NM_001130581 XM_216985
VERSION     NM_001130581.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC097470.1 and JAXUCZ010000007.1.
            
            On Sep 23, 2014 this sequence version replaced NM_001130581.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-415               BC097470.1         1-415
            416-485             JAXUCZ010000007.1  113082077-113082146 c
            486-565             JAXUCZ010000007.1  113081463-113081542 c
            566-712             JAXUCZ010000007.1  113080523-113080669 c
            713-814             JAXUCZ010000007.1  113078597-113078698 c
            815-919             JAXUCZ010000007.1  113077958-113078062 c
            920-1043            JAXUCZ010000007.1  113075558-113075681 c
            1044-1151           JAXUCZ010000007.1  113073893-113074000 c
            1152-1237           JAXUCZ010000007.1  113071105-113071190 c
            1238-1337           JAXUCZ010000007.1  113068196-113068295 c
            1338-1432           JAXUCZ010000007.1  113067963-113068057 c
            1433-1590           JAXUCZ010000007.1  113065523-113065680 c
            1591-1743           JAXUCZ010000007.1  113062928-113063080 c
            1744-1884           JAXUCZ010000007.1  113059859-113059999 c
            1885-2007           JAXUCZ010000007.1  113058112-113058234 c
            2008-3219           JAXUCZ010000007.1  113054751-113055962 c
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..3219
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /note="family with sequence similarity 227, member A"
                     /db_xref="GeneID:300074"
                     /db_xref="RGD:1305939"
     exon            1..110
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            111..332
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..2080
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /codon_start=1
                     /product="protein FAM227A"
                     /protein_id="NP_001124053.2"
                     /db_xref="GeneID:300074"
                     /db_xref="RGD:1305939"
                     /translation="MSSAKTMEAINVAALPMLALDERLVVSVNARKVLENALRKQLQE
                     NPPACIIGSMSQVNKKITEIEMDSSLLVYTSAIEDYELEKKSLKEKTHSSLGDGVKKL
                     KEESPIICEGSELRNAKVHITKRKTAEKTLLAELHEYPQFDEMRPNKLPNGVDFCEMV
                     GNVIRSEKNPLSGKSYCLDRELEKFLCSPFLVAIWLDSFWWLFHERYHPDRETQKKLF
                     DRIARNYASLIFKMRRSHYEEALLKRLSSLLSKAMYTSFCCCFPQSWFNTHEFKSEIC
                     NTMNLWISGTYPCPQSYNNWDCSELDPERFQREEFLLQNSRLLRAREFTSFSYTKSST
                     QDIGQKKYKKFHKFMAALKASRSHVMNEKDLSSKKISEGSWKCCSTMRENDIPTLFSR
                     KVTRQVKRISYARAYMDSFMKESHPACKTPELTANQFNLYGKSPLMVYFFLNYSPIQL
                     PGRDLLVSRREKTEIIPDNTLTYADIIQLVTKNMAIRRKKLRQLDRMYENEWNCFNNY
                     LMELQENYERELVIIDKKEKEKKKAKHMVVSSSTLFDYLFNGKAKGNPHKEIAFLSRK
                     EKREVEGKQKGFQSPFSLENSVDNYSLGLKSPYIMKSASSKPSSSKSKGKQDMLFRLS
                     PSSIE"
     exon            333..415
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            416..485
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            486..565
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            566..712
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            713..814
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            815..919
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1043
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1044..1151
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1152..1237
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1238..1337
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1338..1432
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..1590
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1591..1743
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1744..1884
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            1885..2007
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
     exon            2008..3219
                     /gene="Fam227a"
                     /gene_synonym="RGD1305939"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcggtttgg ggtcgcggat gccggcggcc atccggagct tggtcgggtc gcccgagggg
       61 cgggtggcgg aactcgccct gaggctttgg gattctgccg aagctttcag caggctgccc
      121 ggataaagaa caagattaga gcagaaagag aggaaacttt tttgtctgcc agtctacgag
      181 aaattggtca atgtcgtctg ctaagacgat ggaagctatc aacgtcgccg ccctaccaat
      241 gctagcattg gacgaacgcc tggtggtctc tgtcaatgcg aggaaggtgc tggagaatgc
      301 tttgaggaag cagctgcagg aaaacccacc cgcatgcatt attggctcca tgagccaggt
      361 gaacaagaag attactgaaa tagagatgga ctccagcctg ttggtctaca cctcggcaat
      421 tgaggactat gagttggaga agaagtcttt aaaagagaaa actcacagca gcctgggaga
      481 cggagtcaag aaactgaagg aagagtcccc gataatctgc gaaggctcag agctccggaa
      541 tgccaaggtg cacatcacaa aaaggaaaac agcagaaaag accctgctcg cagagctcca
      601 tgaatacccc cagtttgacg aaatgaggcc caacaaacta cccaatggcg tggacttctg
      661 cgaaatggtg ggcaatgtga tccgatctga gaaaaacccc ctgagtggca agtcttactg
      721 tttagacaga gaactagaga agtttctgtg ttcgcctttt ctcgtggcca tatggctgga
      781 tagcttttgg tggctatttc acgaaaggta ccacccagac agggagaccc agaagaagct
      841 gttcgaccga atagcccgaa actacgcctc cctgatattc aaaatgcgtc ggtcccatta
      901 cgaagaggca ctcttaaaga ggctctcttc acttctgagc aaagccatgt acaccagctt
      961 ctgctgctgc ttcccccagt cctggttcaa tacccacgaa ttcaagtcag agatctgtaa
     1021 caccatgaac ctgtggattt cagggacata tccttgccca cagagctata acaattggga
     1081 ctgctcagaa ctggatccag agaggttcca gagagaagaa ttcttgttac agaacagtcg
     1141 acttctaagg gcaagagagt tcacctcctt ctcctatacg aaatcatcca cccaggatat
     1201 aggacagaag aagtataaga agttccataa atttatggct gccctgaagg cttctcgttc
     1261 ccatgtaatg aatgaaaaag acctttcaag taagaagatc tccgagggaa gttggaagtg
     1321 ttgcagcacc atgagagaga atgatatacc taccctgttc tccaggaaag tcacacggca
     1381 agtcaagcgg atatcatacg ccagagcata catggattca tttatgaaag agtcccaccc
     1441 tgcctgcaaa acccccgaac tgactgcaaa ccagttcaac ctttatggaa agagcccgct
     1501 aatggtgtac ttcttcctca actactcccc gatacagctg cctggtcggg acctgctggt
     1561 cagcaggaga gaaaagactg aaatcatccc tgacaacacc ctgacctatg ctgacatcat
     1621 ccagctggtc acaaagaaca tggcaattcg aaggaaaaag ctcaggcagc tagaccggat
     1681 gtacgagaac gagtggaact gttttaacaa ttacctaatg gagctgcaag aaaactatga
     1741 gagggagttg gttatcatcg ataagaaaga gaaagaaaag aaaaaagcca agcacatggt
     1801 cgtctcctcc tcgacgttgt ttgactactt gtttaacggc aaggccaagg gaaaccccca
     1861 caaagaaatt gccttccttt caaggaagga aaagagagag gtagaaggga aacaaaaggg
     1921 tttccagtcc cctttctcac tggaaaactc tgtggataac tattccttgg gcctaaaaag
     1981 cccctacata atgaagtctg cctccagtaa gcccagcagc agtaagtcca aaggcaagca
     2041 ggatatgctc ttccgactct caccctcctc cattgaatga acacacccaa gaacaggagg
     2101 cctcggaggg gacgcccatg tctgctgtca gatgtgatag aaaacagaat tagcaatggg
     2161 acatatggag tctctcctgt ggactgcgaa tattaaagtt cacacttgtc atgaaccatt
     2221 cagggcttag acacaccata caccgaatcc atcagacatt tactaatttg ttctttcatt
     2281 cacttgataa taacaacaca atccaacaca tccttgtgaa atgtagcaag accttgtctc
     2341 gaaaaccagc caacagcaag gataccaagg gagctgagct gctaagtccc agctgtcttt
     2401 agtcccagca ctctccaggc ccgggcacac aggtagatct gagttcgagg ctggtcgttc
     2461 ctacatgttt gttaaaacat gtgacacaca cttatttgag gcttacccat ctattaatct
     2521 atattgttag atattcacaa cgtttattta tgttttcagt ttaaattttt tatttgcctt
     2581 gcctatgcta gcaaaccact ccttgctgtt tgagggtctt gctgagtttt ctgggacacc
     2641 cgtgtgagtc tcctacctta gtcactgggc ccagctgcct ctacctggtt tgggggtgat
     2701 cataaaggaa gtttacagta aagcaacaga aatgagtttg agcctacata tttgcaatcc
     2761 tttagtcctg cacctctttg tattaactgt ctgaagggtg tcaccccctc ctgggcctac
     2821 aggctctctc agagctgtaa aacagctcac ttctttcctg gggagtaggc acaaccaaac
     2881 atttccagga attttagatt cctttcaagg tccctgaaac tctgcctgcc tcataagcca
     2941 actacacttc tggaaatcta ccctatgaaa acctgaggaa aaaaggcgtg tagaagatgc
     3001 ttcatttgtc gtctctgaga agaggggaaa ctcgttaata acagacatcc tatgcaatac
     3061 tgtgtggcca tttaaagctc tgtgggaggc atgggaagtg cagaggtaag agttggggtg
     3121 tggccgagca gcgagtactg gttgagtatg tcttcttggt tttgttaacg ttttcaataa
     3181 aaactaactt tctattttgg ttttggtttt taaaacttg
//
