LOCUS       NM_001013934            1795 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 221, member B
            (Fam221b), mRNA.
ACCESSION   NM_001013934 XM_008763670 XM_216487
VERSION     NM_001013934.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1 and BC081906.1.
            
            On or before Jun 20, 2015 this sequence version replaced
            XM_008763670.1, NM_001013934.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081906.1, SRR26360190.336605.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                JAXUCZ010000005.1  62715080-62715137   c
            59-1795             BC081906.1         1-1737
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..1795
                     /gene="Fam221b"
                     /note="family with sequence similarity 221, member B"
                     /db_xref="GeneID:298398"
                     /db_xref="RGD:1310425"
     exon            1..207
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     CDS             175..1731
                     /gene="Fam221b"
                     /note="uncharacterized protein C9orf128 homolog"
                     /codon_start=1
                     /product="protein FAM221B"
                     /protein_id="NP_001013956.2"
                     /db_xref="GeneID:298398"
                     /db_xref="RGD:1310425"
                     /translation="MDLEPPGLSPEMEADKTSEGPPATQDAKKHPSLTVPHAEDLPEA
                     TTPESPPHLLSSQEYFQPPKVHSKTYPSLDLGTKDSEDLQDPSVSETPLKLDTANLPS
                     TPSQSSAQSVISLERAISKIPLDDFIYENSISEVQEEPLPLSPTTDISKYEYPISDVQ
                     EEPLLLSPTTNISKYEDSISDVQEEPLEDTPTADISETEYSISDVQEEPLEPPPTADI
                     PESEDYISDDHEEPLEPPPTADIPESSYEFISDKVPQTQVPESEPFPKHSVPEPSAQA
                     KEAASADEEEAEEEELTGGTSKTAAAGSEHHARKKKEKRGCESRPVVPAKRAELVEMA
                     KAMHRKQFDDQVNDLFQWEKNSSLKAIQTGIYIGWRCPHYLWDCFRIGDESKCFCGHL
                     LKEHQIISDLSVPCSVSQCRCLMFCFIPSRPEEVGEFWLKKRATFDPKAWRAQCRCKH
                     THEEHAATGSHPCRHRGCYCNSFESNFLCAACDRRWEEHETFFETEETKRRGKRPYGT
                     NTAKNRHRPF"
     exon            208..1120
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1264
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     exon            1265..1375
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     exon            1376..1573
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     exon            1574..1693
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
     exon            1694..1770
                     /gene="Fam221b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcccttcgt caactcgggc cagagtccct ttgctgcagg tgcccaagtc tccccaaaca
       61 aacataacac aacaaggtct ctcacttacc acctacagtc tggctcagca gcaaaaccat
      121 tccctaggtc aggatcaata cttccccctc aaacccagct aaagatcctg acctatggac
      181 ttggaaccac caggcctaag cccagagatg gaagcagata agacctcaga aggccctccg
      241 gccactcagg atgcaaagaa acacccttct ttaacagtcc cccatgctga agacttgcct
      301 gaggccacta cccctgaaag tcccccgcac cttttgagct cacaggagta tttccagcct
      361 ccaaaagtcc actctaaaac atatccttcc ctcgatcttg gcaccaagga ctctgaggac
      421 ctccaggatc cttctgtctc tgaaacgcct ttaaagttgg atactgccaa tcttccttcc
      481 acaccatctc aatcgtctgc ccagtctgtg atctccctag aaagagccat ctctaagatc
      541 cctttggatg atttcatcta tgagaattct atctctgaag tccaagaaga acctcttccg
      601 ctctcaccaa ccaccgatat ctctaagtat gagtatccta tctccgacgt ccaagaagaa
      661 cctcttctgc tctcaccaac caccaatatc tctaagtatg aggattctat ctccgacgtc
      721 caagaagaac ctcttgagga cacaccaaca gccgatatct ctgagactga gtattctatc
      781 tccgacgtcc aagaagaacc tcttgagccc ccaccaacag ccgatatccc tgagagtgag
      841 gattatatct ccgatgacca cgaagaacct cttgagcccc caccaacagc tgatatccct
      901 gagtcctcct atgagtttat ctctgataaa gtcccacaga cccaggtccc tgaatctgag
      961 ccctttccaa agcactccgt tccagaacct tccgcccaag ccaaggaggc cgcatctgca
     1021 gacgaagagg aagcagagga agaagagctg acagggggca ctagtaagac tgctgcggcc
     1081 ggatctgagc atcatgcgag gaagaagaag gagaaaagag gttgtgaaag ccgcccagtg
     1141 gtccctgcta agcgggcaga gctggtggaa atggctaagg caatgcacag aaagcagttt
     1201 gatgatcagg tgaacgatct tttccaatgg gagaagaatt catccctgaa ggccatccag
     1261 acaggtatct acattggctg gcgctgccca cattatttat gggactgttt ccggatagga
     1321 gatgagtcta agtgcttttg tggacatttg ttgaaagaac accagatcat ctcagatctg
     1381 tccgtgccct gcagtgtaag ccagtgcagg tgcctcatgt tttgtttcat cccatcacgc
     1441 ccggaggagg tgggtgagtt ctggctcaag aaacgagcca ccttcgaccc caaggcctgg
     1501 agggcccaat gtcgctgtaa acacactcat gaagagcacg cagccactgg atctcatccc
     1561 tgcaggcacc gtggctgtta ctgcaactcc tttgagtcta atttcctctg tgcggcttgc
     1621 gaccggcgct gggaggagca cgaaactttc tttgagactg aggagaccaa gcgaagagga
     1681 aaaagacctt atgggacaaa cactgccaag aaccggcaca ggcccttctg agcttggcca
     1741 cgatcaacaa taaagtggaa gccaatagaa aaaaaaaaaa aaaaaaaaaa aaaaa
//
