LOCUS       NM_001271083            1876 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 217, member A
            (Fam217a), mRNA.
ACCESSION   NM_001271083 XM_001065485 XM_574011
VERSION     NM_001271083.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000017.1 and BC083911.1.
            
            On or before Sep 1, 2012 this sequence version replaced
            XM_001065485.3, XM_574011.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-97                JAXUCZ010000017.1  30180403-30180499
            98-182              JAXUCZ010000017.1  30181222-30181306
            183-196             JAXUCZ010000017.1  30181424-30181437
            197-271             JAXUCZ010000017.1  30182177-30182251
            272-339             JAXUCZ010000017.1  30182338-30182405
            340-1113            JAXUCZ010000017.1  30185297-30186070
            1114-1876           BC083911.1         1233-1995
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1876
                     /gene="Fam217a"
                     /note="family with sequence similarity 217, member A"
                     /db_xref="GeneID:498735"
                     /db_xref="RGD:1566214"
     exon            1..97
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..1570
                     /gene="Fam217a"
                     /note="uncharacterized protein C6orf146 homolog"
                     /codon_start=1
                     /product="protein FAM217A"
                     /protein_id="NP_001258012.1"
                     /db_xref="GeneID:498735"
                     /db_xref="RGD:1566214"
                     /translation="MGRKSNESCSANPHSSSISQENLSQWNLDAEDLFDENESFLSEK
                     DGVAGGKTNKNHLESPAEQLVLQLTVSEHAHSRSQNNNQGVFQLWSSPVNKGSIIDKR
                     EFKNSSVETGFSAANSPKLFTLNHLLASILGLTDSKQVITYPGRSMPTGLCWPYADGD
                     FLKDRNEFHIKLFSTMENNNGDSLSASNWNFKYRNSSVEENVTDESDLSESEKMNDSL
                     LSYFKKMDLNLKPETIEHVERAFTEEANQVSVYADFLPAPFNTMDLHRFAFSKCESWK
                     TTVDPPESSIERLIMRLLELERLQHMTIQRERPKLQSTFCSSMFSMAERPSSSKAITL
                     KARPPKIPETPTLQTSSVDKNRDKRKNNSGSGKPEQNVPKWSLSTAGKSKSNSRSLLK
                     CSSTSKQCAMAHDDVKNPKNSILNPCQDPPPKPTTTTQAIQPMIKVVSTRCLPPRSPM
                     PVSPIPLSFPENPREEVKVPRTKKKCHRKSILQNRPFHVQKRNCLSPSLIARGKCSPT
                     DQK"
     exon            98..182
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
     exon            183..196
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
     exon            197..271
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
     exon            272..339
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
     exon            340..1876
                     /gene="Fam217a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactttaagg gaacagaaga acaactccaa taaaatggga agaaaaagca acgagagctg
       61 tagcgccaac ccgcattcgt caagcatttc ccaggagaat ctctctcaat ggaacctgga
      121 tgcagaagac ctctttgatg aaaacgaaag cttcttatcc gaaaaggatg gtgtggcagg
      181 tggcaaaact aacaagaacc atctggaaag tccagcagaa cagctggttt tgcagctgac
      241 cgtatcagag catgctcaca gtagatcaca gaacaataat caaggggtat ttcagctatg
      301 gagttctcct gttaataaag gaagtatcat agataaaaga gaattcaaaa actcttccgt
      361 ggaaactggc ttcagtgcag ccaacagtcc caagctcttc actctaaacc acttattagc
      421 aagtattctg ggtttgacag atagcaagca agtcattact tatcccggtc ggtcaatgcc
      481 aacaggtctg tgctggcctt atgccgatgg agactttctt aaggatagaa atgagtttca
      541 tattaagttg ttttcaacta tggaaaacaa caatggtgac tctttatctg cttcaaattg
      601 gaatttcaaa tacagaaaca gcagtgtgga agaaaatgtc acagacgaga gtgacttatc
      661 cgaaagcgag aaaatgaatg actctctgct cagctacttt aaaaagatgg acctgaactt
      721 aaagccagag acgatagaac acgtggagag agctttcaca gaggaagcaa accaagtgtc
      781 tgtatatgcc gactttctcc ctgccccttt caacactatg gacctgcaca gatttgcctt
      841 ctctaaatgt gaaagctgga agacaacagt ggaccctcca gaaagctcca tcgagcgttt
      901 gataatgcgt ttattggaac tggaaagatt acaacatatg accatacaaa gggagaggcc
      961 aaagttacaa agcactttct gtagctccat gttttcaatg gcagaacgac cctcttcctc
     1021 taaagccatt acactgaaag ccaggccgcc aaagattcct gaaacaccaa ctctccagac
     1081 ctccagcgta gataaaaatc gagacaagag aaaaaacaac tctggttctg gcaagccaga
     1141 gcaaaatgtt cccaaatgga gcttgagcac tgctggcaaa agtaagtcga actctagatc
     1201 gttgctgaaa tgttcatcca cttcaaaaca gtgtgctatg gctcatgatg acgtaaagaa
     1261 tcccaaaaac tcaattttaa acccttgcca ggacccccca cccaagccta ctactactac
     1321 ccaagcaatt caaccaatga ttaaagtggt ttcaacaaga tgccttccac cgaggtcccc
     1381 gatgccagtt tcccctatac ccctgtcctt ccctgaaaat ccaagggaag aagttaaagt
     1441 gccaaggacc aaaaagaaat gtcaccgaaa aagcatacta cagaatagac ctttccatgt
     1501 tcagaagcga aactgcttat caccctcact tatagccagg ggcaagtgct cacccacgga
     1561 ccaaaaatag ctttcatata tctcaatgtg agtgaatcta tctcatgaaa cccagctaaa
     1621 atatggttca tcattgagac acaggtatta gaaacaaaaa ttccttgata tgacatgggt
     1681 agaactcatg aatgtcactg ctgactctat atataaaatc aagggcttcc tcactgacat
     1741 tgacaatctt ttgtatgtta tacttcgaaa aaatgtctca tttagttaaa acaaactatt
     1801 caaaagactg ttcttattgt tgtgattgtt ttccaatgat tccatcacta ataaatagta
     1861 taattgacat attcta
//
